RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 PPP2R5DQ14738 602 aa6.57□□□□□ -1.36
ATXN3-246ENST00000557030 LCNL1Q6ZST4 164 aa6.57□□□□□ -1.36
ATXN3-246ENST00000557030 EMC9Q9Y3B6 208 aa6.57□□□□□ -1.36
ATXN3-246ENST00000557030 ZNF608Q9ULD9 1512 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-246ENST00000557030 NPIPB6E9PJ23 425 aa6.56□□□□□ -1.36
ATXN3-246ENST00000557030 VAMP4O75379 141 aa6.56□□□□□ -1.36
ATXN3-246ENST00000557030 LINC00310P59036 64 aa6.56□□□□□ -1.36
ATXN3-246ENST00000557030 NAALADL2Q58DX5 795 aa6.56□□□□□ -1.36
ATXN3-246ENST00000557030 EEF1DP3Q658K8 133 aa6.56□□□□□ -1.36
ATXN3-246ENST00000557030 MCF2L2Q86YR7 1114 aa6.56□□□□□ -1.36
ATXN3-246ENST00000557030 SIAH1Q8IUQ4 282 aa6.56□□□□□ -1.36
ATXN3-246ENST00000557030 LRRC56Q8IYG6 542 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-246ENST00000557030 NUP43Q8NFH3 380 aa6.56□□□□□ -1.36
ATXN3-246ENST00000557030 GMLQ99445 158 aa6.56□□□□□ -1.36
ATXN3-246ENST00000557030 SGPP1Q9BX95 441 aa6.56□□□□□ -1.36
ATXN3-246ENST00000557030 CNTD2Q9H8S5 307 aa6.56□□□□□ -1.36
ATXN3-246ENST00000557030 LMTK3Q96Q04 1460 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 WDR97A6NE52 1622 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 TCAF2A6NFQ2 919 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 ABLIM1O14639 778 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 SRGAP3O43295 1099 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 MPOP05164 745 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 ETFBP38117 255 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 ARL4AP40617 200 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 ZC3H6P61129 1189 aaKnown RBP6.55□□□□□ -1.36
ATXN3-246ENST00000557030 SRSF3P84103 164 aaKnown RBP6.55□□□□□ -1.36
ATXN3-246ENST00000557030 CYP4F3Q08477 520 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 NCAPHQ15003 741 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 NAT16Q8N8M0 369 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 SLC43A3Q8NBI5 491 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 COPS5Q92905 334 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 MRGPRX3Q96LB0 322 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 ZNF408Q9H9D4 720 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 PRKAG3Q9UGI9 489 aa6.55□□□□□ -1.36
ATXN3-246ENST00000557030 IRS2Q9Y4H2 1338 aa6.54□□□□□ -1.36
ATXN3-246ENST00000557030 IRS4O14654 1257 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-246ENST00000557030 TBC1D8O95759 1140 aa6.54□□□□□ -1.36
ATXN3-246ENST00000557030 FBLN7Q53RD9 439 aa6.54□□□□□ -1.36
ATXN3-246ENST00000557030 TNNI3KQ59H18 835 aa6.54□□□□□ -1.36
ATXN3-246ENST00000557030 LARP1BQ659C4 914 aaKnown RBP6.54□□□□□ -1.36
ATXN3-246ENST00000557030 RPTNQ6XPR3 784 aa6.54□□□□□ -1.36
ATXN3-246ENST00000557030 ADAT2Q7Z6V5 191 aaKnown RBP6.54□□□□□ -1.36
ATXN3-246ENST00000557030 BACE2Q9Y5Z0 518 aa6.54□□□□□ -1.36
ATXN3-246ENST00000557030 RRBP1Q9P2E9 1410 aaKnown RBP6.53□□□□□ -1.36
ATXN3-246ENST00000557030 C2orf71A6NGG8 1288 aa6.53□□□□□ -1.36
ATXN3-246ENST00000557030 STXBP3O00186 592 aa6.53□□□□□ -1.36
ATXN3-246ENST00000557030 N4BP3O15049 544 aa6.53□□□□□ -1.36
ATXN3-246ENST00000557030 PPP1R11O60927 126 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-246ENST00000557030 CAPNS1P04632 268 aa6.53□□□□□ -1.36
ATXN3-246ENST00000557030 DBHP09172 617 aa6.53□□□□□ -1.36
ATXN3-246ENST00000557030 L1CAMP32004 1257 aa6.53□□□□□ -1.36
ATXN3-246ENST00000557030 AMPD2Q01433 879 aa6.53□□□□□ -1.36
ATXN3-246ENST00000557030 APBA2Q99767 749 aa6.53□□□□□ -1.36
ATXN3-246ENST00000557030 EPB41L4AQ9HCS5 686 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-246ENST00000557030 PDLIM7Q9NR12 457 aa6.53□□□□□ -1.36
ATXN3-246ENST00000557030 ACTR10Q9NZ32 417 aa6.53□□□□□ -1.36
ATXN3-246ENST00000557030 PCDHA5Q9Y5H7 936 aa6.53□□□□□ -1.36
ATXN3-246ENST00000557030 MAP3K1Q13233 1512 aa6.53□□□□□ -1.36
ATXN3-246ENST00000557030 DHX57Q6P158 1386 aaKnown RBP6.53□□□□□ -1.36
ATXN3-246ENST00000557030 ADAMTS20P59510 1910 aa6.52□□□□□ -1.37
ATXN3-246ENST00000557030 FBLN1P23142 703 aa6.52□□□□□ -1.37
ATXN3-246ENST00000557030 MAPKAPK2P49137 400 aa6.52□□□□□ -1.37
ATXN3-246ENST00000557030 CDR1P51861 262 aa6.52□□□□□ -1.37
ATXN3-246ENST00000557030 EPHB3P54753 998 aa6.52□□□□□ -1.37
ATXN3-246ENST00000557030 NR1I3Q14994 352 aa6.52□□□□□ -1.37
ATXN3-246ENST00000557030 DPY19L1Q2PZI1 675 aa6.52□□□□□ -1.37
ATXN3-246ENST00000557030 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
ATXN3-246ENST00000557030 MRM1Q6IN84 353 aaKnown RBP6.52□□□□□ -1.37
ATXN3-246ENST00000557030 C6orf15Q6UXA7 325 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-246ENST00000557030 JAMLQ86YT9 394 aa6.52□□□□□ -1.37
ATXN3-246ENST00000557030 TRIM59Q8IWR1 403 aa6.52□□□□□ -1.37
ATXN3-246ENST00000557030 BVESQ8NE79 360 aa6.52□□□□□ -1.37
ATXN3-246ENST00000557030 ZSCAN18Q8TBC5 510 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-246ENST00000557030 MICAL1Q8TDZ2 1067 aa6.52□□□□□ -1.37
ATXN3-246ENST00000557030 AKT3Q9Y243 479 aa6.52□□□□□ -1.37
ATXN3-246ENST00000557030 CUL7Q14999 1698 aa6.52□□□□□ -1.37
ATXN3-246ENST00000557030 ABCA5Q8WWZ7 1642 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 B2RBV5 119 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 CYBBP04839 570 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 ZSCAN22P10073 491 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-246ENST00000557030 GLI4P10075 376 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 TMEM62Q0P6H9 643 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 SSPNQ14714 243 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 RAB3GAP1Q15042 981 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 PLEKHN1Q494U1 663 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-246ENST00000557030 OLFML2BQ68BL8 750 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 LDHDQ86WU2 507 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 IGDCC3Q8IVU1 814 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 FAM178BQ8IXR5 827 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 TMEFF1Q8IYR6 380 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 HNRNPLLQ8WVV9 542 aaKnown RBP6.51□□□□□ -1.37
ATXN3-246ENST00000557030 MTA3Q9BTC8 594 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 SIRT5Q9NXA8 310 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 FBLN5Q9UBX5 448 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 SUGT1Q9Y2Z0 365 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 R3HCC1Q9Y3T6 440 aaKnown RBP6.51□□□□□ -1.37
ATXN3-246ENST00000557030 TIAM1Q13009 1591 aa6.51□□□□□ -1.37
ATXN3-246ENST00000557030 TDRD9Q8NDG6 1382 aaKnown RBP6.5□□□□□ -1.37
ATXN3-246ENST00000557030 NUDT19A8MXV4 375 aa6.5□□□□□ -1.37
ATXN3-246ENST00000557030 IGFBP6P24592 240 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms