RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 KDM5AP29375 1690 aaKnown RBP5.72□□□□□ -1.49
SRP54-212ENST00000556992 CD163L1Q9NR16 1453 aa5.72□□□□□ -1.49
SRP54-212ENST00000556992 CT47B1P0C2W7 299 aaPredicted RBP5.72□□□□□ -1.49
SRP54-212ENST00000556992 IL13P35225 146 aa5.72□□□□□ -1.49
SRP54-212ENST00000556992 RPS26P62854 115 aaKnown RBP5.72□□□□□ -1.49
SRP54-212ENST00000556992 IRF2BP1Q8IU81 584 aa5.72□□□□□ -1.49
SRP54-212ENST00000556992 PLEKHF1Q96S99 279 aa5.72□□□□□ -1.49
SRP54-212ENST00000556992 JAG2Q9Y219 1238 aa5.72□□□□□ -1.49
SRP54-212ENST00000556992 YBX2Q9Y2T7 364 aaKnown RBP5.72□□□□□ -1.49
SRP54-212ENST00000556992 KCTD3Q9Y597 815 aa5.72□□□□□ -1.49
SRP54-212ENST00000556992 PTPRUQ92729 1446 aa5.72□□□□□ -1.49
SRP54-212ENST00000556992 IL16Q14005 1332 aa5.72□□□□□ -1.49
SRP54-212ENST00000556992 FITM1A5D6W6 292 aa5.71□□□□□ -1.5
SRP54-212ENST00000556992 TRIM13O60858 407 aa5.71□□□□□ -1.5
SRP54-212ENST00000556992 PLCG1P19174 1290 aa5.71□□□□□ -1.5
SRP54-212ENST00000556992 SDHBP21912 280 aa5.71□□□□□ -1.5
SRP54-212ENST00000556992 TMPOP42166 694 aaKnown RBP5.71□□□□□ -1.5
SRP54-212ENST00000556992 RIPK4P57078 832 aa5.71□□□□□ -1.5
SRP54-212ENST00000556992 RPL6Q02878 288 aaKnown RBP5.71□□□□□ -1.5
SRP54-212ENST00000556992 PDE4BQ07343 736 aa5.71□□□□□ -1.5
SRP54-212ENST00000556992 OXR1Q8N573 874 aa5.71□□□□□ -1.5
SRP54-212ENST00000556992 PMFBP1Q8TBY8 1022 aa5.71□□□□□ -1.5
SRP54-212ENST00000556992 SHISA4Q96DD7 197 aa5.71□□□□□ -1.5
SRP54-212ENST00000556992 RRP7AQ9Y3A4 280 aaKnown RBP5.71□□□□□ -1.5
SRP54-212ENST00000556992 PTCH1Q13635 1447 aa5.71□□□□□ -1.5
SRP54-212ENST00000556992 FOXD2O60548 495 aaPredicted RBP5.7□□□□□ -1.5
SRP54-212ENST00000556992 BRD1O95696 1058 aa5.7□□□□□ -1.5
SRP54-212ENST00000556992 PI3P19957 117 aa5.7□□□□□ -1.5
SRP54-212ENST00000556992 GNA15P30679 374 aa5.7□□□□□ -1.5
SRP54-212ENST00000556992 TEKQ02763 1124 aa5.7□□□□□ -1.5
SRP54-212ENST00000556992 LMOD3Q0VAK6 560 aa5.7□□□□□ -1.5
SRP54-212ENST00000556992 VMACQ2NL98 169 aa5.7□□□□□ -1.5
SRP54-212ENST00000556992 BNC2Q6ZN30 1099 aaPredicted RBP5.7□□□□□ -1.5
SRP54-212ENST00000556992 LILRA2Q8N149 483 aa5.7□□□□□ -1.5
SRP54-212ENST00000556992 CYB5D2Q8WUJ1 264 aa5.7□□□□□ -1.5
SRP54-212ENST00000556992 KCNC2Q96PR1 638 aa5.7□□□□□ -1.5
SRP54-212ENST00000556992 ZNF552Q9H707 407 aaPredicted RBP5.7□□□□□ -1.5
SRP54-212ENST00000556992 CWC22Q9HCG8 908 aaKnown RBP5.7□□□□□ -1.5
SRP54-212ENST00000556992 KLHL3Q9UH77 587 aa5.7□□□□□ -1.5
SRP54-212ENST00000556992 ANKARQ7Z5J8 1434 aa5.69□□□□□ -1.5
SRP54-212ENST00000556992 USP2O75604 605 aaPredicted RBP5.69□□□□□ -1.5
SRP54-212ENST00000556992 FBLN1P23142 703 aa5.69□□□□□ -1.5
SRP54-212ENST00000556992 PRKAR2BP31323 418 aa5.69□□□□□ -1.5
SRP54-212ENST00000556992 TNNI2P48788 182 aa5.69□□□□□ -1.5
SRP54-212ENST00000556992 NFE2L2Q16236 605 aa5.69□□□□□ -1.5
SRP54-212ENST00000556992 TSNAXIP1Q2TAA8 658 aa5.69□□□□□ -1.5
SRP54-212ENST00000556992 ADGRF1Q5T601 910 aa5.69□□□□□ -1.5
SRP54-212ENST00000556992 EXOC6Q8TAG9 804 aa5.69□□□□□ -1.5
SRP54-212ENST00000556992 ZNF428Q96B54 188 aa5.69□□□□□ -1.5
SRP54-212ENST00000556992 ADAM30Q9UKF2 790 aa5.69□□□□□ -1.5
SRP54-212ENST00000556992 KCNH3Q9ULD8 1083 aa5.69□□□□□ -1.5
SRP54-212ENST00000556992 TACC3Q9Y6A5 838 aa5.69□□□□□ -1.5
SRP54-212ENST00000556992 QRICH2Q9H0J4 1663 aa5.69□□□□□ -1.5
SRP54-212ENST00000556992 USP31Q70CQ4 1352 aa5.68□□□□□ -1.5
SRP54-212ENST00000556992 NPHP4O75161 1426 aaPredicted RBP5.68□□□□□ -1.5
SRP54-212ENST00000556992 TEX51A0A1B0GUA7 166 aa5.68□□□□□ -1.5
SRP54-212ENST00000556992 NOTOA8MTQ0 251 aa5.68□□□□□ -1.5
SRP54-212ENST00000556992 CHURC1-FNTBB4DL54 471 aa5.68□□□□□ -1.5
SRP54-212ENST00000556992 PLIN1O60240 522 aa5.68□□□□□ -1.5
SRP54-212ENST00000556992 GRIN3BO60391 1043 aa5.68□□□□□ -1.5
SRP54-212ENST00000556992 PEX10O60683 326 aa5.68□□□□□ -1.5
SRP54-212ENST00000556992 SEMA7AO75326 666 aa5.68□□□□□ -1.5
SRP54-212ENST00000556992 AMPHP49418 695 aa5.68□□□□□ -1.5
SRP54-212ENST00000556992 RARSP54136 660 aaKnown RBP5.68□□□□□ -1.5
SRP54-212ENST00000556992 EPHB3P54753 998 aa5.68□□□□□ -1.5
SRP54-212ENST00000556992 PDE4CQ08493 712 aa5.68□□□□□ -1.5
SRP54-212ENST00000556992 RRS1Q15050 365 aaKnown RBP5.68□□□□□ -1.5
SRP54-212ENST00000556992 TCERG1LQ5VWI1 586 aa5.68□□□□□ -1.5
SRP54-212ENST00000556992 MARCH10Q8NA82 808 aaPredicted RBP5.68□□□□□ -1.5
SRP54-212ENST00000556992 RNF141Q8WVD5 230 aa5.68□□□□□ -1.5
SRP54-212ENST00000556992 DHX38Q92620 1227 aaKnown RBP5.68□□□□□ -1.5
SRP54-212ENST00000556992 DUSP9Q99956 384 aaKnown RBP5.68□□□□□ -1.5
SRP54-212ENST00000556992 CPS1P31327 1500 aa5.68□□□□□ -1.5
SRP54-212ENST00000556992 ADAMTS20P59510 1910 aa5.68□□□□□ -1.5
SRP54-212ENST00000556992 USP32Q8NFA0 1604 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 USP6P35125 1406 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 SSH2Q76I76 1423 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 NKTRP30414 1462 aaKnown RBP5.67□□□□□ -1.5
SRP54-212ENST00000556992 IPO8O15397 1037 aaKnown RBP5.67□□□□□ -1.5
SRP54-212ENST00000556992 DNAJA2O60884 412 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 BCAR3O75815 825 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 HMOX1P09601 288 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 ATF3P18847 181 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 CANXP27824 592 aaKnown RBP5.67□□□□□ -1.5
SRP54-212ENST00000556992 GNAI1P63096 354 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 EIF4A2Q14240 407 aaKnown RBP5.67□□□□□ -1.5
SRP54-212ENST00000556992 NR0B2Q15466 257 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 HSP90AB2PQ58FF8 381 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 ZPBP2Q6X784 338 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 KCNH5Q8NCM2 988 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 SYTL4Q96C24 671 aaPredicted RBP5.67□□□□□ -1.5
SRP54-212ENST00000556992 PHACTR3Q96KR7 559 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 KREMEN1Q96MU8 473 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 CRBNQ96SW2 442 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 G6PC3Q9BUM1 346 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 AK5Q9Y6K8 562 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 DIP2AQ14689 1571 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 CDC42BPGQ6DT37 1551 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 KIF24Q5T7B8 1368 aa5.67□□□□□ -1.5
SRP54-212ENST00000556992 CFAP65Q6ZU64 1925 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms