RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 MCTP2Q6DN12 878 aa27.11■■□□□ 1.93
SIX4-203ENST00000556952 CEP131Q9UPN4 1083 aa27.11■■□□□ 1.93
SIX4-203ENST00000556952 CTDP1Q9Y5B0 961 aaPredicted RBP27.11■■□□□ 1.93
SIX4-203ENST00000556952 NONOQ15233 471 aaKnown RBP eCLIP27.1■■□□□ 1.93
SIX4-203ENST00000556952 ADAMTS5Q9UNA0 930 aa27.1■■□□□ 1.93
SIX4-203ENST00000556952 MRPL11Q9Y3B7 192 aaKnown RBP27.1■■□□□ 1.93
SIX4-203ENST00000556952 ZNF536O15090 1300 aa27.1■■□□□ 1.93
SIX4-203ENST00000556952 SMCHD1A6NHR9 2005 aa27.1■■□□□ 1.93
SIX4-203ENST00000556952 VWA5AO00534 786 aa27.09■■□□□ 1.93
SIX4-203ENST00000556952 MBD3O95983 291 aa27.09■■□□□ 1.93
SIX4-203ENST00000556952 CYP2C8P10632 490 aa27.09■■□□□ 1.93
SIX4-203ENST00000556952 HOXA7P31268 230 aaPredicted RBP27.09■■□□□ 1.93
SIX4-203ENST00000556952 SLC39A14Q15043 492 aa27.09■■□□□ 1.93
SIX4-203ENST00000556952 NOM1Q5C9Z4 860 aaKnown RBP27.09■■□□□ 1.93
SIX4-203ENST00000556952 HOXC10Q9NYD6 342 aa27.09■■□□□ 1.93
SIX4-203ENST00000556952 SPTLC2O15270 562 aa27.09■■□□□ 1.93
SIX4-203ENST00000556952 TRAK2O60296 914 aa27.09■■□□□ 1.93
SIX4-203ENST00000556952 BMP15O95972 392 aa27.09■■□□□ 1.93
SIX4-203ENST00000556952 OAZ1P54368 228 aa27.09■■□□□ 1.93
SIX4-203ENST00000556952 ATG4CQ96DT6 458 aa27.09■■□□□ 1.93
SIX4-203ENST00000556952 BIN2Q9UBW5 565 aaPredicted RBP27.09■■□□□ 1.93
SIX4-203ENST00000556952 CCPG1Q9ULG6 757 aa27.09■■□□□ 1.93
SIX4-203ENST00000556952 MORC2Q9Y6X9 1032 aaPredicted RBP27.09■■□□□ 1.93
SIX4-203ENST00000556952 AP3B2Q13367 1082 aa27.08■■□□□ 1.93
SIX4-203ENST00000556952 PTPAQ15257 358 aa27.08■■□□□ 1.93
SIX4-203ENST00000556952 TTC38Q5R3I4 469 aa27.08■■□□□ 1.93
SIX4-203ENST00000556952 ZFYVE28Q9HCC9 887 aa27.08■■□□□ 1.93
SIX4-203ENST00000556952 SLC45A1Q9Y2W3 748 aa27.08■■□□□ 1.93
SIX4-203ENST00000556952 DDX49Q9Y6V7 483 aaKnown RBP27.08■■□□□ 1.93
SIX4-203ENST00000556952 PIK3CDO00329 1044 aa27.07■■□□□ 1.92
SIX4-203ENST00000556952 PPP6R2O75170 966 aa27.07■■□□□ 1.92
SIX4-203ENST00000556952 GADD45BO75293 160 aaPredicted RBP27.07■■□□□ 1.92
SIX4-203ENST00000556952 KLHL40Q2TBA0 621 aa27.07■■□□□ 1.92
SIX4-203ENST00000556952 JAKMIP3Q5VZ66 844 aa27.07■■□□□ 1.92
SIX4-203ENST00000556952 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.07■■□□□ 1.92
SIX4-203ENST00000556952 PCDHB6Q9Y5E3 794 aa27.07■■□□□ 1.92
SIX4-203ENST00000556952 ADGRA2Q96PE1 1338 aa27.07■■□□□ 1.92
SIX4-203ENST00000556952 GOLGA6L4A6NEF3 574 aa27.06■■□□□ 1.92
SIX4-203ENST00000556952 PABPC4Q13310 644 aaKnown RBP eCLIP27.06■■□□□ 1.92
SIX4-203ENST00000556952 UBE2SQ16763 222 aa27.06■■□□□ 1.92
SIX4-203ENST00000556952 REPS2Q8NFH8 660 aa27.06■■□□□ 1.92
SIX4-203ENST00000556952 TMEM260Q9NX78 707 aa27.06■■□□□ 1.92
SIX4-203ENST00000556952 ZSWIM8A7E2V4 1837 aa27.06■■□□□ 1.92
SIX4-203ENST00000556952 SPDYE16A6NNV3 312 aaPredicted RBP27.05■■□□□ 1.92
SIX4-203ENST00000556952 GPR25O00155 361 aa27.05■■□□□ 1.92
SIX4-203ENST00000556952 MEIS2O14770 477 aa27.05■■□□□ 1.92
SIX4-203ENST00000556952 OPLAHO14841 1288 aa27.05■■□□□ 1.92
SIX4-203ENST00000556952 INF2Q27J81 1249 aa27.05■■□□□ 1.92
SIX4-203ENST00000556952 AGBL1Q96MI9 1066 aa27.05■■□□□ 1.92
SIX4-203ENST00000556952 PARK7Q99497 189 aaKnown RBP27.05■■□□□ 1.92
SIX4-203ENST00000556952 MYH7BA7E2Y1 1941 aa27.05■■□□□ 1.92
SIX4-203ENST00000556952 ATP2A1O14983 1001 aa27.05■■□□□ 1.92
SIX4-203ENST00000556952 TLR2O60603 784 aa27.05■■□□□ 1.92
SIX4-203ENST00000556952 ATP2B1P20020 1258 aa27.05■■□□□ 1.92
SIX4-203ENST00000556952 ME1P48163 572 aa27.05■■□□□ 1.92
SIX4-203ENST00000556952 NEK8Q86SG6 692 aa27.05■■□□□ 1.92
SIX4-203ENST00000556952 RAVER2Q9HCJ3 691 aaKnown RBP27.05■■□□□ 1.92
SIX4-203ENST00000556952 FOSP01100 380 aaPredicted RBP27.04■■□□□ 1.92
SIX4-203ENST00000556952 TAL1P17542 331 aaPredicted RBP27.04■■□□□ 1.92
SIX4-203ENST00000556952 ORC2Q13416 577 aaPredicted RBP27.04■■□□□ 1.92
SIX4-203ENST00000556952 CPXCR1Q8N123 301 aa27.04■■□□□ 1.92
SIX4-203ENST00000556952 GPT2Q8TD30 523 aa27.04■■□□□ 1.92
SIX4-203ENST00000556952 TBCKQ8TEA7 893 aa27.04■■□□□ 1.92
SIX4-203ENST00000556952 ZNF296Q8WUU4 475 aaPredicted RBP27.04■■□□□ 1.92
SIX4-203ENST00000556952 PGBD1Q96JS3 809 aa27.04■■□□□ 1.92
SIX4-203ENST00000556952 ASCC2Q9H1I8 757 aaPredicted RBP27.04■■□□□ 1.92
SIX4-203ENST00000556952 IRX3P78415 501 aaPredicted RBP27.03■■□□□ 1.92
SIX4-203ENST00000556952 USP17L6PQ6QN14 398 aa27.03■■□□□ 1.92
SIX4-203ENST00000556952 LBX2Q6XYB7 198 aa27.03■■□□□ 1.92
SIX4-203ENST00000556952 SAMD3Q8N6K7 520 aa27.03■■□□□ 1.92
SIX4-203ENST00000556952 MB21D1Q8N884 522 aa27.03■■□□□ 1.92
SIX4-203ENST00000556952 CPA4Q9UI42 421 aa27.03■■□□□ 1.92
SIX4-203ENST00000556952 PNMA3Q9UL41 463 aa27.02■■□□□ 1.92
SIX4-203ENST00000556952 ZNF214Q9UL59 606 aaPredicted RBP27.02■■□□□ 1.92
SIX4-203ENST00000556952 PCDHA7Q9UN72 937 aa27.02■■□□□ 1.92
SIX4-203ENST00000556952 SPDYE3A6NKU9 549 aa27.01■■□□□ 1.92
SIX4-203ENST00000556952 GCOM1H8Y6P7 765 aaPredicted RBP27.01■■□□□ 1.92
SIX4-203ENST00000556952 WNT7AO00755 349 aa27.01■■□□□ 1.92
SIX4-203ENST00000556952 POLR2MP0CAP2 368 aa27.01■■□□□ 1.92
SIX4-203ENST00000556952 GHRHRQ02643 423 aa27.01■■□□□ 1.92
SIX4-203ENST00000556952 ADALQ6DHV7 355 aa27.01■■□□□ 1.92
SIX4-203ENST00000556952 C17orf99Q6UX52 265 aa27.01■■□□□ 1.92
SIX4-203ENST00000556952 MCF2L2Q86YR7 1114 aa27.01■■□□□ 1.92
SIX4-203ENST00000556952 ANO3Q9BYT9 981 aa27.01■■□□□ 1.92
SIX4-203ENST00000556952 PRDM10Q9NQV6 1147 aa27.01■■□□□ 1.92
SIX4-203ENST00000556952 ALAS1P13196 640 aa27.01■■□□□ 1.91
SIX4-203ENST00000556952 OSBPP22059 807 aa27.01■■□□□ 1.91
SIX4-203ENST00000556952 TEX13BQ9BXU2 312 aa27.01■■□□□ 1.91
SIX4-203ENST00000556952 MAP3K20Q9NYL2 800 aaKnown RBP27.01■■□□□ 1.91
SIX4-203ENST00000556952 A0A1W2PQ27 194 aa27■■□□□ 1.91
SIX4-203ENST00000556952 A0A1W2PQ64 194 aa27■■□□□ 1.91
SIX4-203ENST00000556952 A0A1W2PQD8 194 aa27■■□□□ 1.91
SIX4-203ENST00000556952 CFBP00751 764 aa27■■□□□ 1.91
SIX4-203ENST00000556952 ATP2C1P98194 919 aaPredicted RBP27■■□□□ 1.91
SIX4-203ENST00000556952 TMEM132BQ14DG7 1078 aa27■■□□□ 1.91
SIX4-203ENST00000556952 ZNF174Q15697 407 aa27■■□□□ 1.91
SIX4-203ENST00000556952 TKFCQ3LXA3 575 aa27■■□□□ 1.91
SIX4-203ENST00000556952 SMCR8Q8TEV9 937 aaPredicted RBP27■■□□□ 1.91
SIX4-203ENST00000556952 CLEC4DQ8WXI8 215 aa27■■□□□ 1.91
SIX4-203ENST00000556952 P2RX7Q99572 595 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms