RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 FLT1P17948 1338 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 MYO3BQ8WXR4 1341 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 TCP10L2B9ZVM9 353 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 USP17L12C9JPN9 530 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 USP17L21D6R901 530 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 WNT10BO00744 389 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 GNB5O14775 395 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 BAG3O95817 575 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 EN2P19622 333 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-244ENST00000556898 TDO2P48775 406 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 RBM25P49756 843 aaKnown RBP6.29□□□□□ -1.4
ATXN3-244ENST00000556898 MMP14P50281 582 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 CLDN10P78369 228 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 HDLBPQ00341 1268 aaKnown RBP6.29□□□□□ -1.4
ATXN3-244ENST00000556898 TCP10Q12799 353 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 DLGAP5Q15398 846 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 LDLRAD1Q5T700 205 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 PRAMEF18Q5VWM3 479 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 CTR9Q6PD62 1173 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 OTOP1Q7RTM1 612 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 TICAM2Q86XR7 235 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 KCNB2Q92953 911 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 ARMC5Q96C12 935 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 DYNLL2Q96FJ2 89 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 TCEANC2Q96MN5 208 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 CRNKL1Q9BZJ0 848 aaKnown RBP6.29□□□□□ -1.4
ATXN3-244ENST00000556898 NAPBQ9H115 298 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 VEZTQ9HBM0 779 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 ZNF70Q9UC06 446 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-244ENST00000556898 PTPN22Q9Y2R2 807 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 USP3Q9Y6I4 520 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 TNRC18O15417 2968 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-244ENST00000556898 RPAP1Q9BWH6 1393 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-244ENST00000556898 MYH2Q9UKX2 1941 aa6.29□□□□□ -1.4
ATXN3-244ENST00000556898 NEDD4P46934 1319 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 DDTLA6NHG4 134 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-244ENST00000556898 MANSC4A6NHS7 340 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-244ENST00000556898 FAM196BA6NMK8 535 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 E7EWF7 191 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 DLL1O00548 723 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 ZNF213O14771 459 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 DTNBO60941 627 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 PRDM1O75626 825 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 DKK1O94907 266 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 INHAP05111 366 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 MAPTP10636 758 aaKnown RBP6.28□□□□□ -1.4
ATXN3-244ENST00000556898 GNAT2P19087 354 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 ATP1A2P50993 1020 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 PLCD1P51178 756 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 GDF10P55107 478 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 TNP2Q05952 138 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 PPARAQ07869 468 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 ALX1Q15699 326 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 CHSY3Q70JA7 882 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 CHST3Q7LGC8 479 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 FCHSD1Q86WN1 690 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 SIX5Q8N196 739 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 OGFOD1Q8N543 542 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 SLC44A5Q8NCS7 719 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 ERO1AQ96HE7 468 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 JAKMIP1Q96N16 626 aaKnown RBP6.28□□□□□ -1.4
ATXN3-244ENST00000556898 MRIQ9BWK5 157 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 LRRC2Q9BYS8 371 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 UPF3BQ9BZI7 483 aaKnown RBP6.28□□□□□ -1.4
ATXN3-244ENST00000556898 OSBPL5Q9H0X9 879 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-244ENST00000556898 EFCC1Q9HA90 598 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 UPF2Q9HAU5 1272 aaKnown RBP6.28□□□□□ -1.4
ATXN3-244ENST00000556898 MCM9Q9NXL9 1143 aa6.28□□□□□ -1.4
ATXN3-244ENST00000556898 A0A1W2PNR3 127 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 DCDC2BA2VCK2 349 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 UNCXA6NJT0 531 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 ATXN7O15265 892 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-244ENST00000556898 IGSF3O75054 1194 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 POLR3DP05423 398 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-244ENST00000556898 CD33P20138 364 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 MCCP23508 829 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 ARHGEF6Q15052 776 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 IMMTQ16891 758 aaKnown RBP6.27□□□□□ -1.41
ATXN3-244ENST00000556898 SHROOM1Q2M3G4 852 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-244ENST00000556898 RRP12Q5JTH9 1297 aaKnown RBP6.27□□□□□ -1.41
ATXN3-244ENST00000556898 C12orf60Q5U649 245 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 OTUD7BQ6GQQ9 843 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 NOL8Q76FK4 1167 aaKnown RBP6.27□□□□□ -1.41
ATXN3-244ENST00000556898 CYB5R4Q7L1T6 521 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 NBPF11Q86T75 865 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 PBXIP1Q96AQ6 731 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 TRIM11Q96F44 468 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 NACAP1Q9BZK3 213 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 TMEM39BQ9GZU3 492 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 ATP8A2Q9NTI2 1148 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 FZD1Q9UP38 647 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 KIAA1024Q9UPX6 916 aa6.27□□□□□ -1.41
ATXN3-244ENST00000556898 NAV1Q8NEY1 1877 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 DDX60LQ5H9U9 1706 aaKnown RBP6.26□□□□□ -1.41
ATXN3-244ENST00000556898 TMEM229AB2RXF0 380 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 B4E1Z4 1266 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 USP17L15C9J2P7 530 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 USP17L10C9JJH3 530 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 USP17L13C9JLJ4 530 aa6.26□□□□□ -1.41
ATXN3-244ENST00000556898 USP17L11C9JVI0 530 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms