RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 PPP1R1BQ9UD71 204 aaPredicted RBP7.81□□□□□ -1.16
HIF1A-209ENST00000556827 MBD1Q9UIS9 605 aaPredicted RBP7.81□□□□□ -1.16
HIF1A-209ENST00000556827 ZNF214Q9UL59 606 aaPredicted RBP7.81□□□□□ -1.16
HIF1A-209ENST00000556827 FHOD1Q9Y613 1164 aa7.81□□□□□ -1.16
HIF1A-209ENST00000556827 RAPGEF2Q9Y4G8 1499 aa7.81□□□□□ -1.16
HIF1A-209ENST00000556827 ATP2B1P20020 1258 aa7.8□□□□□ -1.16
HIF1A-209ENST00000556827 CD247P20963 164 aa7.8□□□□□ -1.16
HIF1A-209ENST00000556827 GTF2F1P35269 517 aaKnown RBP eCLIP7.8□□□□□ -1.16
HIF1A-209ENST00000556827 CASP7P55210 303 aa7.8□□□□□ -1.16
HIF1A-209ENST00000556827 TMEM62Q0P6H9 643 aa7.8□□□□□ -1.16
HIF1A-209ENST00000556827 RAB3GAP1Q15042 981 aa7.8□□□□□ -1.16
HIF1A-209ENST00000556827 TCEAL1Q15170 157 aa7.8□□□□□ -1.16
HIF1A-209ENST00000556827 ANKRD39Q53RE8 183 aa7.8□□□□□ -1.16
HIF1A-209ENST00000556827 ZNF385BQ569K4 471 aa7.8□□□□□ -1.16
HIF1A-209ENST00000556827 ANKS3Q6ZW76 656 aa7.8□□□□□ -1.16
HIF1A-209ENST00000556827 C19orf47Q8N9M1 422 aaKnown RBP7.8□□□□□ -1.16
HIF1A-209ENST00000556827 ZDHHC15Q96MV8 337 aa7.8□□□□□ -1.16
HIF1A-209ENST00000556827 JMJD8Q96S16 334 aa7.8□□□□□ -1.16
HIF1A-209ENST00000556827 NOL6Q9H6R4 1146 aaKnown RBP7.8□□□□□ -1.16
HIF1A-209ENST00000556827 PRKAG3Q9UGI9 489 aa7.8□□□□□ -1.16
HIF1A-209ENST00000556827 SF3B6Q9Y3B4 125 aaKnown RBP7.8□□□□□ -1.16
HIF1A-209ENST00000556827 ZNF451Q9Y4E5 1061 aa7.8□□□□□ -1.16
HIF1A-209ENST00000556827 KCTD3Q9Y597 815 aa7.8□□□□□ -1.16
HIF1A-209ENST00000556827 IRAK3Q9Y616 596 aa7.8□□□□□ -1.16
HIF1A-209ENST00000556827 NUDT19A8MXV4 375 aa7.79□□□□□ -1.16
HIF1A-209ENST00000556827 NOP2P46087 812 aaKnown RBP7.79□□□□□ -1.16
HIF1A-209ENST00000556827 YBX1P67809 324 aaKnown RBP7.79□□□□□ -1.16
HIF1A-209ENST00000556827 SSPNQ14714 243 aa7.79□□□□□ -1.16
HIF1A-209ENST00000556827 LCE4AQ5TA78 99 aa7.79□□□□□ -1.16
HIF1A-209ENST00000556827 SIGLEC10Q96LC7 697 aa7.79□□□□□ -1.16
HIF1A-209ENST00000556827 SLC12A7Q9Y666 1083 aa7.79□□□□□ -1.16
HIF1A-209ENST00000556827 CD3EP07766 207 aa7.78□□□□□ -1.16
HIF1A-209ENST00000556827 PI3P19957 117 aa7.78□□□□□ -1.16
HIF1A-209ENST00000556827 EPHB3P54753 998 aa7.78□□□□□ -1.16
HIF1A-209ENST00000556827 GNPTABQ3T906 1256 aa7.78□□□□□ -1.16
HIF1A-209ENST00000556827 HLA-DQA1Q5Y7H0 255 aa7.78□□□□□ -1.16
HIF1A-209ENST00000556827 LARP1BQ659C4 914 aaKnown RBP7.78□□□□□ -1.16
HIF1A-209ENST00000556827 CYP2R1Q6VVX0 501 aa7.78□□□□□ -1.16
HIF1A-209ENST00000556827 TMC6Q7Z403 805 aa7.78□□□□□ -1.16
HIF1A-209ENST00000556827 TMEM52Q8NDY8 209 aa7.78□□□□□ -1.16
HIF1A-209ENST00000556827 MICAL1Q8TDZ2 1067 aa7.78□□□□□ -1.16
HIF1A-209ENST00000556827 CNTD2Q9H8S5 307 aa7.78□□□□□ -1.16
HIF1A-209ENST00000556827 ACTR10Q9NZ32 417 aa7.78□□□□□ -1.16
HIF1A-209ENST00000556827 ACSL6Q9UKU0 697 aa7.78□□□□□ -1.16
HIF1A-209ENST00000556827 GLI2P10070 1586 aa7.78□□□□□ -1.16
HIF1A-209ENST00000556827 STK10O94804 968 aaKnown RBP7.77□□□□□ -1.17
HIF1A-209ENST00000556827 CEBPAP49715 358 aaPredicted RBP7.77□□□□□ -1.17
HIF1A-209ENST00000556827 PPP2R5DQ14738 602 aa7.77□□□□□ -1.17
HIF1A-209ENST00000556827 TCERG1LQ5VWI1 586 aa7.77□□□□□ -1.17
HIF1A-209ENST00000556827 ADCY4Q8NFM4 1077 aa7.77□□□□□ -1.17
HIF1A-209ENST00000556827 KLHL6Q8WZ60 621 aa7.77□□□□□ -1.17
HIF1A-209ENST00000556827 HAUS7Q99871 368 aa7.77□□□□□ -1.17
HIF1A-209ENST00000556827 PHAXQ9H814 394 aaKnown RBP7.77□□□□□ -1.17
HIF1A-209ENST00000556827 TNFRSF12AQ9NP84 129 aa7.77□□□□□ -1.17
HIF1A-209ENST00000556827 EPRSP07814 1512 aaKnown RBP7.77□□□□□ -1.17
HIF1A-209ENST00000556827 KDM5BQ9UGL1 1544 aa7.77□□□□□ -1.17
HIF1A-209ENST00000556827 ADGRL1O94910 1474 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 GOLGA3Q08378 1498 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 A0A1W2PQJ5 194 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 B2RBV5 119 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 N4BP3O15049 544 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 INHBBP09529 407 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 POU4F1Q01851 419 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 TNNI3KQ59H18 835 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 HEATR6Q6AI08 1181 aaKnown RBP7.76□□□□□ -1.17
HIF1A-209ENST00000556827 VHLLQ6RSH7 139 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 TMEM151BQ8IW70 566 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 CELF2-AS1Q8N7Q2 184 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 SREK1Q8WXA9 508 aaKnown RBP7.76□□□□□ -1.17
HIF1A-209ENST00000556827 GBP3Q9H0R5 595 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 ST7Q9NRC1 585 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 WHRNQ9P202 907 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 KLHL14Q9P2G3 628 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 TSPOAP1O95153 1857 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 DISP1Q96F81 1524 aa7.76□□□□□ -1.17
HIF1A-209ENST00000556827 UGGT2Q9NYU1 1516 aa7.75□□□□□ -1.17
HIF1A-209ENST00000556827 FGF10O15520 208 aaPredicted RBP7.75□□□□□ -1.17
HIF1A-209ENST00000556827 CBFA2T2O43439 604 aa7.75□□□□□ -1.17
HIF1A-209ENST00000556827 KLF4O43474 513 aa7.75□□□□□ -1.17
HIF1A-209ENST00000556827 IFNGR1P15260 489 aa7.75□□□□□ -1.17
HIF1A-209ENST00000556827 RANGAP1P46060 587 aaPredicted RBP7.75□□□□□ -1.17
HIF1A-209ENST00000556827 SLC7A5Q01650 507 aa7.75□□□□□ -1.17
HIF1A-209ENST00000556827 KIAA1211LQ6NV74 962 aa7.75□□□□□ -1.17
HIF1A-209ENST00000556827 C6orf15Q6UXA7 325 aaPredicted RBP7.75□□□□□ -1.17
HIF1A-209ENST00000556827 MZB1Q8WU39 189 aa7.75□□□□□ -1.17
HIF1A-209ENST00000556827 FCRL3Q96P31 734 aaPredicted RBP7.75□□□□□ -1.17
HIF1A-209ENST00000556827 CD109Q6YHK3 1445 aa7.75□□□□□ -1.17
HIF1A-209ENST00000556827 WDR7Q9Y4E6 1490 aa7.75□□□□□ -1.17
HIF1A-209ENST00000556827 A0A087WZG4 1122 aa7.74□□□□□ -1.17
HIF1A-209ENST00000556827 TBC1D8O95759 1140 aa7.74□□□□□ -1.17
HIF1A-209ENST00000556827 CDR1P51861 262 aa7.74□□□□□ -1.17
HIF1A-209ENST00000556827 RPTNQ6XPR3 784 aa7.74□□□□□ -1.17
HIF1A-209ENST00000556827 TTLL10Q6ZVT0 673 aa7.74□□□□□ -1.17
HIF1A-209ENST00000556827 ADAT2Q7Z6V5 191 aaKnown RBP7.74□□□□□ -1.17
HIF1A-209ENST00000556827 PTCHD1Q96NR3 888 aa7.74□□□□□ -1.17
HIF1A-209ENST00000556827 DIS3Q9Y2L1 958 aaKnown RBP7.74□□□□□ -1.17
HIF1A-209ENST00000556827 R3HCC1Q9Y3T6 440 aaKnown RBP7.74□□□□□ -1.17
HIF1A-209ENST00000556827 MSL3P1P0C860 447 aa7.73□□□□□ -1.17
HIF1A-209ENST00000556827 BMP7P18075 431 aa7.73□□□□□ -1.17
HIF1A-209ENST00000556827 MVKQ03426 396 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms