RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 BTNL9Q6UXG8 535 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 NSMFQ6X4W1 530 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 TBC1D10CQ8IV04 446 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 PNMA1Q8ND90 353 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 VTI1AQ96AJ9 217 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 ZKSCAN3Q9BRR0 538 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 ZSWIM5Q9P217 1185 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 MGAMO43451 1857 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 BAZ2AQ9UIF9 1905 aaKnown RBP8.57□□□□□ -1.04
SCFD1-222ENST00000556768 B4E1Z4 1266 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 DHX16O60231 1041 aaKnown RBP8.57□□□□□ -1.04
SCFD1-222ENST00000556768 DUSP11O75319 330 aaKnown RBP8.57□□□□□ -1.04
SCFD1-222ENST00000556768 PGK1P00558 417 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 ZNF865P0CJ78 1059 aaPredicted RBP8.57□□□□□ -1.04
SCFD1-222ENST00000556768 SYN1P17600 705 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 LRRC26Q2I0M4 334 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 IFIT1BQ5T764 474 aaKnown RBP8.57□□□□□ -1.04
SCFD1-222ENST00000556768 ARMCX2Q7L311 632 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 RALYLQ86SE5 291 aaKnown RBP8.57□□□□□ -1.04
SCFD1-222ENST00000556768 CCDC144CPQ8IYA2 1237 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 PCSK9Q8NBP7 692 aaKnown RBP8.57□□□□□ -1.04
SCFD1-222ENST00000556768 FERMT2Q96AC1 680 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 A1CFQ9NQ94 594 aaKnown RBP8.57□□□□□ -1.04
SCFD1-222ENST00000556768 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.57□□□□□ -1.04
SCFD1-222ENST00000556768 ATP11BQ9Y2G3 1177 aa8.57□□□□□ -1.04
SCFD1-222ENST00000556768 FRMPD2Q68DX3 1309 aaPredicted RBP8.56□□□□□ -1.04
SCFD1-222ENST00000556768 DOCK3Q8IZD9 2030 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 A0A0C4DFX4 3053 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 PTPDC1A2A3K4 754 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 SNAI1O95863 264 aaPredicted RBP8.56□□□□□ -1.04
SCFD1-222ENST00000556768 GSPT1P15170 499 aaKnown RBP8.56□□□□□ -1.04
SCFD1-222ENST00000556768 TAL1P17542 331 aaPredicted RBP8.56□□□□□ -1.04
SCFD1-222ENST00000556768 CHMLP26374 656 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 BMP8BP34820 402 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 SNAP25P60880 206 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 ZNF543Q08ER8 600 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 CCDC144BQ3MJ40 725 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 ASPRV1Q53RT3 343 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 TTBK2Q6IQ55 1244 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 SLC39A5Q6ZMH5 540 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 GLT1D1Q96MS3 346 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 TSEN34Q9BSV6 310 aaKnown RBP8.56□□□□□ -1.04
SCFD1-222ENST00000556768 UBE2OQ9C0C9 1292 aaKnown RBP8.56□□□□□ -1.04
SCFD1-222ENST00000556768 RANBP17Q9H2T7 1088 aaKnown RBP8.56□□□□□ -1.04
SCFD1-222ENST00000556768 PCDH10Q9P2E7 1040 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 ADGRG1Q9Y653 693 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 TACC3Q9Y6A5 838 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 ZNF536O15090 1300 aa8.56□□□□□ -1.04
SCFD1-222ENST00000556768 MOXD2PA6NHM9 499 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 ZEB2O60315 1214 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 PARP1P09874 1014 aaKnown RBP8.55□□□□□ -1.04
SCFD1-222ENST00000556768 C6orf222P0C671 652 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-222ENST00000556768 SNHG28P0DPA3 235 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 NEDD4P46934 1319 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 FXR1P51114 621 aaKnown RBP eCLIP8.55□□□□□ -1.04
SCFD1-222ENST00000556768 RTP1P59025 263 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 CNTN2Q02246 1040 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 TNFAIP2Q03169 654 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 TRAF1Q13077 416 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 GNASQ5JWF2 1037 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 TYW1BQ6NUM6 668 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 CASC1Q6TDU7 716 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 FAM133AQ8N9E0 248 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 RGS22Q8NE09 1264 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 GDF15Q99988 308 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 AP5M1Q9H0R1 490 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 PRDM5Q9NQX1 630 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-222ENST00000556768 CYP39A1Q9NYL5 469 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 MYH7P12883 1935 aa8.55□□□□□ -1.04
SCFD1-222ENST00000556768 TNKSO95271 1327 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 LOC102724159A0A0B4J2E5 919 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 DCDC2CA8MYV0 355 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 MAGEA10P43363 369 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-222ENST00000556768 CLCN6P51797 869 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 BAATQ14032 418 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-222ENST00000556768 PWP2Q15269 919 aaKnown RBP8.54□□□□□ -1.04
SCFD1-222ENST00000556768 C1orf53Q5VUE5 145 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 IQSEC1Q6DN90 963 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 RNF207Q6ZRF8 634 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 CENPQQ7L2Z9 268 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-222ENST00000556768 MCF2L2Q86YR7 1114 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 ENAHQ8N8S7 591 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-222ENST00000556768 NCOA7Q8NI08 942 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 ANKS1AQ92625 1134 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 STARD7Q9NQZ5 370 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 LIMD1Q9UGP4 676 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 PHF24Q9UPV7 400 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 MROH7Q68CQ1 1323 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 WDR19Q8NEZ3 1342 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 IFIT3O14879 490 aaKnown RBP8.54□□□□□ -1.04
SCFD1-222ENST00000556768 GOLGA8HP0CJ92 632 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 CALML3P27482 149 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 ACLYP53396 1101 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 KCNA10Q16322 511 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 USH1GQ495M9 461 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 BRDTQ58F21 947 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-222ENST00000556768 MUM1L1Q5H9M0 696 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 TDHQ8IZJ6 230 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 UBA5Q9GZZ9 404 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 MAF1Q9H063 256 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms