RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 GPR20Q99678 358 aa6.63□□□□□ -1.35
PRPF39-210ENST00000556718 GP6Q9HCN6 339 aa6.63□□□□□ -1.35
PRPF39-210ENST00000556718 FAN1Q9Y2M0 1017 aa6.63□□□□□ -1.35
PRPF39-210ENST00000556718 NOBOXO60393 691 aa6.62□□□□□ -1.35
PRPF39-210ENST00000556718 CNR2P34972 360 aa6.62□□□□□ -1.35
PRPF39-210ENST00000556718 INTS3Q68E01 1043 aaKnown RBP6.62□□□□□ -1.35
PRPF39-210ENST00000556718 CYP2R1Q6VVX0 501 aa6.62□□□□□ -1.35
PRPF39-210ENST00000556718 HS2ST1Q7LGA3 356 aa6.62□□□□□ -1.35
PRPF39-210ENST00000556718 METTL16Q86W50 562 aaKnown RBP6.62□□□□□ -1.35
PRPF39-210ENST00000556718 DHRS1Q96LJ7 313 aa6.62□□□□□ -1.35
PRPF39-210ENST00000556718 PTCHD1Q96NR3 888 aa6.62□□□□□ -1.35
PRPF39-210ENST00000556718 NT5C1AQ9BXI3 368 aa6.62□□□□□ -1.35
PRPF39-210ENST00000556718 MYRFQ9Y2G1 1151 aa6.62□□□□□ -1.35
PRPF39-210ENST00000556718 TP53P04637 393 aaPredicted RBP6.61□□□□□ -1.35
PRPF39-210ENST00000556718 NCAM1P13591 858 aa6.61□□□□□ -1.35
PRPF39-210ENST00000556718 ZYXQ15942 572 aaKnown RBP6.61□□□□□ -1.35
PRPF39-210ENST00000556718 NOL9Q5SY16 702 aaKnown RBP6.61□□□□□ -1.35
PRPF39-210ENST00000556718 CARFQ8N187 725 aa6.61□□□□□ -1.35
PRPF39-210ENST00000556718 FIBCD1Q8N539 461 aa6.61□□□□□ -1.35
PRPF39-210ENST00000556718 ALG3Q92685 438 aa6.61□□□□□ -1.35
PRPF39-210ENST00000556718 NOX5Q96PH1 765 aa6.61□□□□□ -1.35
PRPF39-210ENST00000556718 RNF38Q9H0F5 515 aa6.61□□□□□ -1.35
PRPF39-210ENST00000556718 CAPN10Q9HC96 672 aa6.61□□□□□ -1.35
PRPF39-210ENST00000556718 FBLN5Q9UBX5 448 aa6.61□□□□□ -1.35
PRPF39-210ENST00000556718 DBR1Q9UK59 544 aaKnown RBP6.61□□□□□ -1.35
PRPF39-210ENST00000556718 ZNF451Q9Y4E5 1061 aa6.61□□□□□ -1.35
PRPF39-210ENST00000556718 CD3EP07766 207 aa6.6□□□□□ -1.35
PRPF39-210ENST00000556718 GLI4P10075 376 aa6.6□□□□□ -1.35
PRPF39-210ENST00000556718 PMLP29590 882 aa6.6□□□□□ -1.35
PRPF39-210ENST00000556718 MAGEA10P43363 369 aaPredicted RBP6.6□□□□□ -1.35
PRPF39-210ENST00000556718 ZNF827Q17R98 1081 aa6.6□□□□□ -1.35
PRPF39-210ENST00000556718 ANKRD39Q53RE8 183 aa6.6□□□□□ -1.35
PRPF39-210ENST00000556718 ZNF654Q8IZM8 581 aa6.6□□□□□ -1.35
PRPF39-210ENST00000556718 LNPKQ9C0E8 428 aa6.6□□□□□ -1.35
PRPF39-210ENST00000556718 CNOT11Q9UKZ1 510 aaKnown RBP6.6□□□□□ -1.35
PRPF39-210ENST00000556718 ZNRF3Q9ULT6 936 aa6.6□□□□□ -1.35
PRPF39-210ENST00000556718 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.6□□□□□ -1.35
PRPF39-210ENST00000556718 FHOD1Q9Y613 1164 aa6.6□□□□□ -1.35
PRPF39-210ENST00000556718 CD247P20963 164 aa6.59□□□□□ -1.35
PRPF39-210ENST00000556718 NOP2P46087 812 aaKnown RBP6.59□□□□□ -1.35
PRPF39-210ENST00000556718 CORO7P57737 925 aa6.59□□□□□ -1.35
PRPF39-210ENST00000556718 ADAM17P78536 824 aa6.59□□□□□ -1.35
PRPF39-210ENST00000556718 B3GNT8Q7Z7M8 397 aa6.59□□□□□ -1.35
PRPF39-210ENST00000556718 USP48Q86UV5 1035 aa6.59□□□□□ -1.35
PRPF39-210ENST00000556718 SLC43A3Q8NBI5 491 aa6.59□□□□□ -1.35
PRPF39-210ENST00000556718 NLGN2Q8NFZ4 835 aa6.59□□□□□ -1.35
PRPF39-210ENST00000556718 NOL6Q9H6R4 1146 aaKnown RBP6.59□□□□□ -1.35
PRPF39-210ENST00000556718 SPATA6Q9NWH7 488 aaPredicted RBP6.59□□□□□ -1.35
PRPF39-210ENST00000556718 ITGB3P05106 788 aa6.58□□□□□ -1.36
PRPF39-210ENST00000556718 L1CAMP32004 1257 aa6.58□□□□□ -1.36
PRPF39-210ENST00000556718 RUFY4Q6ZNE9 571 aa6.58□□□□□ -1.36
PRPF39-210ENST00000556718 SMARCC2Q8TAQ2 1214 aa6.58□□□□□ -1.36
PRPF39-210ENST00000556718 ZDHHC15Q96MV8 337 aa6.58□□□□□ -1.36
PRPF39-210ENST00000556718 RBM15Q96T37 977 aaKnown RBP eCLIP6.58□□□□□ -1.36
PRPF39-210ENST00000556718 MCMBPQ9BTE3 642 aa6.58□□□□□ -1.36
PRPF39-210ENST00000556718 TANGO6Q9C0B7 1094 aa6.58□□□□□ -1.36
PRPF39-210ENST00000556718 PALD1Q9ULE6 856 aa6.58□□□□□ -1.36
PRPF39-210ENST00000556718 TBC1D8O95759 1140 aa6.57□□□□□ -1.36
PRPF39-210ENST00000556718 TNFRSF1AP19438 455 aa6.57□□□□□ -1.36
PRPF39-210ENST00000556718 VPS37DQ86XT2 251 aa6.57□□□□□ -1.36
PRPF39-210ENST00000556718 KIAA0825Q8IV33 1275 aa6.57□□□□□ -1.36
PRPF39-210ENST00000556718 SMARCC1Q92922 1105 aaPredicted RBP6.57□□□□□ -1.36
PRPF39-210ENST00000556718 TSPAN17Q96FV3 270 aa6.57□□□□□ -1.36
PRPF39-210ENST00000556718 SPON2Q9BUD6 331 aa6.57□□□□□ -1.36
PRPF39-210ENST00000556718 INPP5FQ9Y2H2 1132 aa6.57□□□□□ -1.36
PRPF39-210ENST00000556718 RWDD3Q9Y3V2 267 aa6.57□□□□□ -1.36
PRPF39-210ENST00000556718 AKAP8O43823 692 aaKnown RBP6.56□□□□□ -1.36
PRPF39-210ENST00000556718 PPP1R11O60927 126 aaPredicted RBP6.56□□□□□ -1.36
PRPF39-210ENST00000556718 GJA9P57773 515 aa6.56□□□□□ -1.36
PRPF39-210ENST00000556718 PPP2R5DQ14738 602 aa6.56□□□□□ -1.36
PRPF39-210ENST00000556718 UNC5AQ6ZN44 842 aa6.56□□□□□ -1.36
PRPF39-210ENST00000556718 ZNF761Q86XN6 746 aaPredicted RBP6.56□□□□□ -1.36
PRPF39-210ENST00000556718 TAB3Q8N5C8 712 aaPredicted RBP6.56□□□□□ -1.36
PRPF39-210ENST00000556718 TINF2Q9BSI4 451 aa6.56□□□□□ -1.36
PRPF39-210ENST00000556718 KRTAP3-1Q9BYR8 98 aa6.56□□□□□ -1.36
PRPF39-210ENST00000556718 ACBD3Q9H3P7 528 aa6.56□□□□□ -1.36
PRPF39-210ENST00000556718 SMPD4Q9NXE4 827 aa6.56□□□□□ -1.36
PRPF39-210ENST00000556718 SF3B6Q9Y3B4 125 aaKnown RBP6.56□□□□□ -1.36
PRPF39-210ENST00000556718 MATN3O15232 486 aa6.55□□□□□ -1.36
PRPF39-210ENST00000556718 CBFA2T2O43439 604 aa6.55□□□□□ -1.36
PRPF39-210ENST00000556718 ITGA4P13612 1032 aa6.55□□□□□ -1.36
PRPF39-210ENST00000556718 ATP2B1P20020 1258 aa6.55□□□□□ -1.36
PRPF39-210ENST00000556718 SARSP49591 514 aaKnown RBP6.55□□□□□ -1.36
PRPF39-210ENST00000556718 POU4F1Q01851 419 aa6.55□□□□□ -1.36
PRPF39-210ENST00000556718 DDX41Q9UJV9 622 aaKnown RBP6.55□□□□□ -1.36
PRPF39-210ENST00000556718 ZXDAP98168 799 aa6.54□□□□□ -1.36
PRPF39-210ENST00000556718 SMAD4Q13485 552 aaKnown RBP6.54□□□□□ -1.36
PRPF39-210ENST00000556718 ZNF394Q53GI3 561 aa6.54□□□□□ -1.36
PRPF39-210ENST00000556718 ADCY4Q8NFM4 1077 aa6.54□□□□□ -1.36
PRPF39-210ENST00000556718 ZBTB8AQ96BR9 441 aa6.54□□□□□ -1.36
PRPF39-210ENST00000556718 FERD3LQ96RJ6 166 aa6.54□□□□□ -1.36
PRPF39-210ENST00000556718 TM9SF2Q99805 663 aa6.54□□□□□ -1.36
PRPF39-210ENST00000556718 SYT3Q9BQG1 590 aa6.54□□□□□ -1.36
PRPF39-210ENST00000556718 STXBP3O00186 592 aa6.53□□□□□ -1.36
PRPF39-210ENST00000556718 DNAJA1P31689 397 aaKnown RBP6.53□□□□□ -1.36
PRPF39-210ENST00000556718 ARID5AQ03989 594 aa6.53□□□□□ -1.36
PRPF39-210ENST00000556718 RCSD1Q6JBY9 416 aa6.53□□□□□ -1.36
PRPF39-210ENST00000556718 CPNE8Q86YQ8 564 aa6.53□□□□□ -1.36
PRPF39-210ENST00000556718 LZTR1Q8N653 840 aa6.53□□□□□ -1.36
PRPF39-210ENST00000556718 DDX11Q96FC9 970 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms