RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 ERCC3P19447 782 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 RWDD2BP57060 319 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 NNTQ13423 1086 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 PPP2R5BQ15173 497 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 SNCBQ16143 134 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 IL17AQ16552 155 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 AKNAD1Q5T1N1 836 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 ALS2CLQ60I27 953 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 CCDC121Q6ZUS5 278 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 ANKLE2Q86XL3 938 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 CCDC170Q8IYT3 715 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 IFNL3Q8IZI9 196 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 JAKMIP2Q96AA8 810 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 CABP5Q9NP86 173 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 FAM205CA6NFA0 338 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 GSG1L2A8MUP6 293 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 N4BP3O15049 544 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 PCCAP05165 728 aaPredicted RBP9.5□□□□□ -0.89
MARK3-210ENST00000556463 CCT6AP40227 531 aaKnown RBP9.5□□□□□ -0.89
MARK3-210ENST00000556463 DNA2P51530 1060 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 SPATS2Q86XZ4 545 aaKnown RBP9.5□□□□□ -0.89
MARK3-210ENST00000556463 FAXDC2Q96IV6 333 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 KRT23Q9C075 422 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 GUCA1BQ9UMX6 200 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.5□□□□□ -0.89
MARK3-210ENST00000556463 TNS3Q68CZ2 1445 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 GOLGA6BA6NDN3 693 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 TRIM75PA6NK02 468 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 SMIM24O75264 130 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 TATP17735 454 aaPredicted RBP9.5□□□□□ -0.89
MARK3-210ENST00000556463 GPTP24298 496 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 TBC1D8BQ0IIM8 1120 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 PAK1Q13153 545 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 RTN1Q16799 776 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 CCDC40Q4G0X9 1142 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 ESCO1Q5FWF5 840 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 FIGNQ5HY92 759 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 CD302Q8IX05 232 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 ADSSL1Q8N142 457 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 FANCBQ8NB91 859 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 NUP88Q99567 741 aaPredicted RBP9.5□□□□□ -0.89
MARK3-210ENST00000556463 RMI1Q9H9A7 625 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 PNPLA7Q6ZV29 1317 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 hCG_2014768A0A024R1R8 64 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 BACH1O14867 736 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 SNUPNO95149 360 aaKnown RBP9.49□□□□□ -0.89
MARK3-210ENST00000556463 SRGNP10124 158 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 FGFR2P21802 821 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 EEF1GP26641 437 aaKnown RBP9.49□□□□□ -0.89
MARK3-210ENST00000556463 HPDP32754 393 aaPredicted RBP9.49□□□□□ -0.89
MARK3-210ENST00000556463 AFMP43652 599 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 KRT83P78385 493 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 SND1Q7KZF4 910 aaKnown RBP eCLIP9.49□□□□□ -0.89
MARK3-210ENST00000556463 TMTC2Q8N394 836 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 C4orf32Q8N8J7 132 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 TBC1D22AQ8WUA7 517 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 RAPGEF4Q8WZA2 1011 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 SNX12Q9UMY4 172 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 A0A1W2PQJ5 194 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 IFIT3O14879 490 aaKnown RBP9.49□□□□□ -0.89
MARK3-210ENST00000556463 ZNF263O14978 683 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 CLTAP09496 248 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 KCNA1Q09470 495 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 TCIRG1Q13488 830 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 ODF2Q5BJF6 829 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 KLHL10Q6JEL2 608 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 ZSCAN29Q8IWY8 852 aaPredicted RBP9.49□□□□□ -0.89
MARK3-210ENST00000556463 TRIM22Q8IYM9 498 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 TTLL11Q8NHH1 800 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 THAP9Q9H5L6 903 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 PPANQ9NQ55 473 aaKnown RBP9.49□□□□□ -0.89
MARK3-210ENST00000556463 DUOX1Q9NRD9 1551 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 ZNF185O15231 689 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 PRPF3O43395 683 aaKnown RBP9.49□□□□□ -0.89
MARK3-210ENST00000556463 PARP1P09874 1014 aaKnown RBP9.49□□□□□ -0.89
MARK3-210ENST00000556463 CCDC57Q2TAC2 916 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 MSL1Q68DK7 614 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 CAPRIN2Q6IMN6 1127 aaKnown RBP9.49□□□□□ -0.89
MARK3-210ENST00000556463 EMBQ6PCB8 327 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 MICALCLQ6ZW33 695 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 KIAA0825Q8IV33 1275 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 IQCKQ8N0W5 287 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 MREGQ8N565 214 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 HDAC7Q8WUI4 952 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 NELFBQ8WX92 580 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 PYM1Q9BRP8 204 aaKnown RBP9.49□□□□□ -0.89
MARK3-210ENST00000556463 VPS16Q9H269 839 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 TAB2Q9NYJ8 693 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 ANAPC4Q9UJX5 808 aa9.49□□□□□ -0.89
MARK3-210ENST00000556463 KLRC4O43908 158 aa9.48□□□□□ -0.89
MARK3-210ENST00000556463 A1BGP04217 495 aa9.48□□□□□ -0.89
MARK3-210ENST00000556463 PRCPP42785 496 aa9.48□□□□□ -0.89
MARK3-210ENST00000556463 DBN1Q16643 649 aa9.48□□□□□ -0.89
MARK3-210ENST00000556463 CCDC122Q5T0U0 273 aa9.48□□□□□ -0.89
MARK3-210ENST00000556463 C6orf89Q6UWU4 347 aa9.48□□□□□ -0.89
MARK3-210ENST00000556463 KDM7AQ6ZMT4 941 aa9.48□□□□□ -0.89
MARK3-210ENST00000556463 ARMC9Q7Z3E5 817 aa9.48□□□□□ -0.89
MARK3-210ENST00000556463 TSEN2Q8NCE0 465 aaKnown RBP9.48□□□□□ -0.89
MARK3-210ENST00000556463 TCP11Q8WWU5 503 aa9.48□□□□□ -0.89
MARK3-210ENST00000556463 RRP36Q96EU6 259 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms