RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 PCDHB13Q9Y5F0 798 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 KDM3AQ9Y4C1 1321 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 CHMP2AO43633 222 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 FTCDO95954 541 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 DESP17661 470 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 USP14P54578 494 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 LRRC41Q15345 812 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 ALX1Q15699 326 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 TMTC3Q6ZXV5 915 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 INTS8Q75QN2 995 aaKnown RBP16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 PCDHA12Q9UN75 941 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 NBPF26B4DH59 902 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 SNAP23O00161 211 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 RGS16O15492 202 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 UFL1O94874 794 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 ABCB4P21439 1286 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 ADAM9Q13443 819 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 NBPF10Q6P3W6 841 aaKnown RBP16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 RAD9BQ6WBX8 426 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 NBPF15Q8N660 670 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 MROH1Q8NDA8 1641 aa16.54■□□□□ 0.24
ARHGEF40-207ENST00000556399 GLT8D2Q9H1C3 349 aa16.54■□□□□ 0.24
ARHGEF40-207ENST00000556399 HPS5Q9UPZ3 1129 aa16.54■□□□□ 0.24
ARHGEF40-207ENST00000556399 ATP2A1O14983 1001 aa16.54■□□□□ 0.24
ARHGEF40-207ENST00000556399 PDIA6Q15084 440 aa16.54■□□□□ 0.24
ARHGEF40-207ENST00000556399 EMBQ6PCB8 327 aa16.54■□□□□ 0.24
ARHGEF40-207ENST00000556399 TRIM7Q9C029 511 aa16.54■□□□□ 0.24
ARHGEF40-207ENST00000556399 STIM2Q9P246 746 aa16.54■□□□□ 0.24
ARHGEF40-207ENST00000556399 STAT1P42224 750 aa16.54■□□□□ 0.24
ARHGEF40-207ENST00000556399 HLFQ16534 295 aa16.54■□□□□ 0.24
ARHGEF40-207ENST00000556399 TADA2BQ86TJ2 420 aa16.54■□□□□ 0.24
ARHGEF40-207ENST00000556399 SMCR8Q8TEV9 937 aaPredicted RBP16.54■□□□□ 0.24
ARHGEF40-207ENST00000556399 NDST4Q9H3R1 872 aa16.54■□□□□ 0.24
ARHGEF40-207ENST00000556399 RNF14Q9UBS8 474 aa16.54■□□□□ 0.24
ARHGEF40-207ENST00000556399 FRMPD2Q68DX3 1309 aaPredicted RBP16.54■□□□□ 0.24
ARHGEF40-207ENST00000556399 ANO9A1A5B4 782 aa16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 RIMBP2O15034 1052 aa16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 E2F4Q16254 413 aa16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 CCDC105Q8IYK2 499 aa16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 H2AFZP0C0S5 128 aa16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 H2AFVQ71UI9 128 aa16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 RASGRP2Q7LDG7 609 aa16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 IL6STP40189 918 aaPredicted RBP16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 ATP11AP98196 1134 aa16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 PLCB3Q01970 1234 aa16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 C6orf163Q5TEZ5 329 aa16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 SRLQ86TD4 932 aa16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 ZBTB16Q05516 673 aa16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 PPP4R3AQ6IN85 833 aa16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 IL17RAQ96F46 866 aa16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 ASIC3Q9UHC3 531 aa16.53■□□□□ 0.24
ARHGEF40-207ENST00000556399 GNPATO15228 680 aa16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 TBC1D8O95759 1140 aa16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 ATP1A1P05023 1023 aaKnown RBP16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 ARHGAP44Q17R89 818 aa16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 ADAT2Q7Z6V5 191 aaKnown RBP16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 MYCT1Q8N699 235 aa16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 IGDCC4Q8TDY8 1250 aa16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 NGLY1Q96IV0 654 aa16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 WDR17Q8IZU2 1322 aa16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 GSG1L2A8MUP6 293 aa16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 FXR1P51114 621 aaKnown RBP eCLIP16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 RCAN1P53805 252 aa16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 ENAHQ8N8S7 591 aaPredicted RBP16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 ZC3H12CQ9C0D7 883 aaKnown RBP16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 PPP1R1BQ9UD71 204 aaPredicted RBP16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 ADD3Q9UEY8 706 aaKnown RBP16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 NR1D1P20393 614 aa16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 PDCLQ13371 301 aa16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 CLUL1Q15846 466 aa16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 ICE2Q659A1 982 aa16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 CARD10Q9BWT7 1032 aa16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 NFU1Q9UMS0 254 aa16.52■□□□□ 0.24
ARHGEF40-207ENST00000556399 ISCA1Q9BUE6 129 aa16.52■□□□□ 0.23
ARHGEF40-207ENST00000556399 TRIM66O15016 1216 aa16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 NAA35Q5VZE5 725 aa16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 USP49Q70CQ1 688 aa16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 TBCKQ8TEA7 893 aa16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 COG1Q8WTW3 980 aa16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 SENP2Q9HC62 589 aa16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 DDX25Q9UHL0 483 aaKnown RBP16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 FAM169AQ9Y6X4 670 aa16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 MGARPQ8TDB4 240 aa16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 ZBTB21Q9ULJ3 1066 aa16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 FKBP3Q00688 224 aaKnown RBP16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 IQCGQ9H095 443 aaKnown RBP16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 RIC8AQ9NPQ8 531 aa16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 MTA3Q9BTC8 594 aa16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 ITSN1Q15811 1721 aa16.51■□□□□ 0.23
ARHGEF40-207ENST00000556399 EXOC3O60645 756 aa16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 SLC1A4P43007 532 aa16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 CHP1Q99653 195 aa16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 FAM205CA6NFA0 338 aa16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 ALDH3A1P30838 453 aa16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 MLXIPQ9HAP2 919 aa16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 LIMA1Q9UHB6 759 aaKnown RBP16.5■□□□□ 0.23
ARHGEF40-207ENST00000556399 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms