RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 MCMBPQ9BTE3 642 aa7.4□□□□□ -1.22
PCNX4-212ENST00000556360 DDX41Q9UJV9 622 aaKnown RBP7.4□□□□□ -1.22
PCNX4-212ENST00000556360 SLC12A7Q9Y666 1083 aa7.4□□□□□ -1.22
PCNX4-212ENST00000556360 PRICKLE3O43900 615 aaPredicted RBP7.39□□□□□ -1.23
PCNX4-212ENST00000556360 NETO2Q8NC67 525 aa7.39□□□□□ -1.23
PCNX4-212ENST00000556360 RNF34Q969K3 372 aa7.39□□□□□ -1.23
PCNX4-212ENST00000556360 SOX9P48436 509 aa7.38□□□□□ -1.23
PCNX4-212ENST00000556360 FBXW10Q5XX13 1052 aa7.38□□□□□ -1.23
PCNX4-212ENST00000556360 CPA5Q8WXQ8 436 aa7.38□□□□□ -1.23
PCNX4-212ENST00000556360 PHAXQ9H814 394 aaKnown RBP7.38□□□□□ -1.23
PCNX4-212ENST00000556360 FAM86C1Q9NVL1 165 aa7.38□□□□□ -1.23
PCNX4-212ENST00000556360 FBLN5Q9UBX5 448 aa7.38□□□□□ -1.23
PCNX4-212ENST00000556360 A0A1B0GTL3 188 aa7.37□□□□□ -1.23
PCNX4-212ENST00000556360 MC3RP41968 323 aa7.37□□□□□ -1.23
PCNX4-212ENST00000556360 RBM10P98175 930 aaKnown RBP7.37□□□□□ -1.23
PCNX4-212ENST00000556360 PLP2Q04941 152 aa7.37□□□□□ -1.23
PCNX4-212ENST00000556360 GRB10Q13322 594 aa7.37□□□□□ -1.23
PCNX4-212ENST00000556360 GGNQ86UU5 652 aa7.37□□□□□ -1.23
PCNX4-212ENST00000556360 ZNF526Q8TF50 670 aaPredicted RBP7.37□□□□□ -1.23
PCNX4-212ENST00000556360 ALG3Q92685 438 aa7.37□□□□□ -1.23
PCNX4-212ENST00000556360 SPATA32Q96LK8 384 aa7.37□□□□□ -1.23
PCNX4-212ENST00000556360 SPATA25Q9BR10 227 aa7.37□□□□□ -1.23
PCNX4-212ENST00000556360 MTA3Q9BTC8 594 aa7.37□□□□□ -1.23
PCNX4-212ENST00000556360 BDH2Q9BUT1 245 aa7.37□□□□□ -1.23
PCNX4-212ENST00000556360 FAN1Q9Y2M0 1017 aa7.37□□□□□ -1.23
PCNX4-212ENST00000556360 PMLP29590 882 aa7.36□□□□□ -1.23
PCNX4-212ENST00000556360 GIPRP48546 466 aa7.36□□□□□ -1.23
PCNX4-212ENST00000556360 SLC9A5Q14940 896 aa7.36□□□□□ -1.23
PCNX4-212ENST00000556360 NT5DC1Q5TFE4 455 aa7.36□□□□□ -1.23
PCNX4-212ENST00000556360 CABP7Q86V35 215 aa7.36□□□□□ -1.23
PCNX4-212ENST00000556360 ADGRG2Q8IZP9 1017 aa7.36□□□□□ -1.23
PCNX4-212ENST00000556360 ARHGEF39Q8N4T4 335 aa7.36□□□□□ -1.23
PCNX4-212ENST00000556360 PEX11GQ96HA9 241 aa7.36□□□□□ -1.23
PCNX4-212ENST00000556360 RCC1LQ96I51 464 aaKnown RBP7.36□□□□□ -1.23
PCNX4-212ENST00000556360 GBP3Q9H0R5 595 aa7.36□□□□□ -1.23
PCNX4-212ENST00000556360 GINM1Q9NU53 330 aa7.36□□□□□ -1.23
PCNX4-212ENST00000556360 DBR1Q9UK59 544 aaKnown RBP7.36□□□□□ -1.23
PCNX4-212ENST00000556360 NOBOXO60393 691 aa7.35□□□□□ -1.23
PCNX4-212ENST00000556360 PPP2R5DQ14738 602 aa7.35□□□□□ -1.23
PCNX4-212ENST00000556360 TMCO4Q5TGY1 634 aa7.35□□□□□ -1.23
PCNX4-212ENST00000556360 LZTR1Q8N653 840 aa7.35□□□□□ -1.23
PCNX4-212ENST00000556360 OR6P1Q8NGX9 317 aa7.35□□□□□ -1.23
PCNX4-212ENST00000556360 RASGRP4Q8TDF6 673 aa7.35□□□□□ -1.23
PCNX4-212ENST00000556360 CGGBP1Q9UFW8 167 aaPredicted RBP7.35□□□□□ -1.23
PCNX4-212ENST00000556360 BACE2Q9Y5Z0 518 aa7.35□□□□□ -1.23
PCNX4-212ENST00000556360 A0A1W2PQH9 124 aa7.34□□□□□ -1.23
PCNX4-212ENST00000556360 STXBP3O00186 592 aa7.34□□□□□ -1.23
PCNX4-212ENST00000556360 PPP1R11O60927 126 aaPredicted RBP7.34□□□□□ -1.23
PCNX4-212ENST00000556360 VAMP1P23763 118 aa7.34□□□□□ -1.23
PCNX4-212ENST00000556360 GNPTABQ3T906 1256 aa7.34□□□□□ -1.23
PCNX4-212ENST00000556360 HEATR6Q6AI08 1181 aaKnown RBP7.34□□□□□ -1.23
PCNX4-212ENST00000556360 CCDC81Q6ZN84 652 aa7.34□□□□□ -1.23
PCNX4-212ENST00000556360 CARFQ8N187 725 aa7.34□□□□□ -1.23
PCNX4-212ENST00000556360 ADCY4Q8NFM4 1077 aa7.34□□□□□ -1.23
PCNX4-212ENST00000556360 KLHL6Q8WZ60 621 aa7.34□□□□□ -1.23
PCNX4-212ENST00000556360 USP40Q9NVE5 1235 aa7.34□□□□□ -1.23
PCNX4-212ENST00000556360 NUDT5Q9UKK9 219 aa7.34□□□□□ -1.23
PCNX4-212ENST00000556360 TRBV23OR9-2A0A075B6M9 112 aa7.33□□□□□ -1.24
PCNX4-212ENST00000556360 ZBTB7AO95365 584 aa7.33□□□□□ -1.24
PCNX4-212ENST00000556360 EPHX1P07099 455 aa7.33□□□□□ -1.24
PCNX4-212ENST00000556360 SLC7A5Q01650 507 aa7.33□□□□□ -1.24
PCNX4-212ENST00000556360 CACNB2Q08289 660 aaPredicted RBP7.33□□□□□ -1.24
PCNX4-212ENST00000556360 PAK2Q13177 524 aa7.33□□□□□ -1.24
PCNX4-212ENST00000556360 ZNF654Q8IZM8 581 aa7.33□□□□□ -1.24
PCNX4-212ENST00000556360 CRBNQ96SW2 442 aa7.33□□□□□ -1.24
PCNX4-212ENST00000556360 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.33□□□□□ -1.24
PCNX4-212ENST00000556360 RWDD3Q9Y3V2 267 aa7.33□□□□□ -1.24
PCNX4-212ENST00000556360 PPM1BO75688 479 aa7.32□□□□□ -1.24
PCNX4-212ENST00000556360 RECKO95980 971 aa7.32□□□□□ -1.24
PCNX4-212ENST00000556360 SEPHS1P49903 392 aa7.32□□□□□ -1.24
PCNX4-212ENST00000556360 EIF6P56537 245 aaKnown RBP7.32□□□□□ -1.24
PCNX4-212ENST00000556360 AMPD2Q01433 879 aa7.32□□□□□ -1.24
PCNX4-212ENST00000556360 UBXN11Q5T124 520 aa7.32□□□□□ -1.24
PCNX4-212ENST00000556360 HHIPL2Q6UWX4 724 aa7.32□□□□□ -1.24
PCNX4-212ENST00000556360 ZNF513Q8N8E2 541 aaPredicted RBP7.32□□□□□ -1.24
PCNX4-212ENST00000556360 SMARCC2Q8TAQ2 1214 aa7.32□□□□□ -1.24
PCNX4-212ENST00000556360 NOX5Q96PH1 765 aa7.32□□□□□ -1.24
PCNX4-212ENST00000556360 LNPKQ9C0E8 428 aa7.32□□□□□ -1.24
PCNX4-212ENST00000556360 BCAS3Q9H6U6 928 aa7.32□□□□□ -1.24
PCNX4-212ENST00000556360 RXFP1Q9HBX9 757 aa7.32□□□□□ -1.24
PCNX4-212ENST00000556360 C2orf71A6NGG8 1288 aa7.31□□□□□ -1.24
PCNX4-212ENST00000556360 VAMP4O75379 141 aa7.31□□□□□ -1.24
PCNX4-212ENST00000556360 WWC2Q6AWC2 1192 aa7.31□□□□□ -1.24
PCNX4-212ENST00000556360 METTL16Q86W50 562 aaKnown RBP7.31□□□□□ -1.24
PCNX4-212ENST00000556360 LINC00482Q8N8I6 264 aa7.31□□□□□ -1.24
PCNX4-212ENST00000556360 SPATA6Q9NWH7 488 aaPredicted RBP7.31□□□□□ -1.24
PCNX4-212ENST00000556360 EFR3BQ9Y2G0 817 aa7.31□□□□□ -1.24
PCNX4-212ENST00000556360 K7ESM1 405 aa7.3□□□□□ -1.24
PCNX4-212ENST00000556360 SCAMP3O14828 347 aaKnown RBP7.3□□□□□ -1.24
PCNX4-212ENST00000556360 PAMP19021 973 aa7.3□□□□□ -1.24
PCNX4-212ENST00000556360 DPY19L1Q2PZI1 675 aa7.3□□□□□ -1.24
PCNX4-212ENST00000556360 ZXDCQ2QGD7 858 aaPredicted RBP7.3□□□□□ -1.24
PCNX4-212ENST00000556360 FGD4Q96M96 766 aa7.3□□□□□ -1.24
PCNX4-212ENST00000556360 NTMQ9P121 344 aa7.3□□□□□ -1.24
PCNX4-212ENST00000556360 GULP1Q9UBP9 304 aa7.3□□□□□ -1.24
PCNX4-212ENST00000556360 PCDHB10Q9UN67 800 aa7.3□□□□□ -1.24
PCNX4-212ENST00000556360 DUSP10Q9Y6W6 482 aa7.3□□□□□ -1.24
PCNX4-212ENST00000556360 GJA8P48165 433 aa7.29□□□□□ -1.24
PCNX4-212ENST00000556360 CASP7P55210 303 aa7.29□□□□□ -1.24
PCNX4-212ENST00000556360 GJA9P57773 515 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms