RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PCDHA1Q9Y5I3 950 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 NPHP4O75161 1426 aaPredicted RBP11.72□□□□□ -0.53
ACTN1-216ENST00000556083 RPN1P04843 607 aaKnown RBP11.71□□□□□ -0.53
ACTN1-216ENST00000556083 ALAS1P13196 640 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 CHRNDQ07001 517 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 AP3B2Q13367 1082 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 USH1GQ495M9 461 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 FAM102BQ5T8I3 360 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 CCDC170Q8IYT3 715 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 ZNF594Q96JF6 807 aaPredicted RBP11.71□□□□□ -0.53
ACTN1-216ENST00000556083 FAM167AQ96KS9 214 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 CARD6Q9BX69 1037 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 TESPA1A2RU30 521 aaPredicted RBP11.71□□□□□ -0.53
ACTN1-216ENST00000556083 A6NJR5 290 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 LDHAP00338 332 aaKnown RBP11.71□□□□□ -0.53
ACTN1-216ENST00000556083 ADAM9Q13443 819 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 EXOC3L4Q17RC7 722 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 ARHGEF25Q86VW2 580 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 NEK9Q8TD19 979 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 LMBRD1Q9NUN5 540 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 BAG5Q9UL15 447 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 CEP170Q5SW79 1584 aa11.71□□□□□ -0.53
ACTN1-216ENST00000556083 MYO1FO00160 1098 aa11.71□□□□□ -0.54
ACTN1-216ENST00000556083 FMNL1O95466 1100 aaPredicted RBP11.71□□□□□ -0.54
ACTN1-216ENST00000556083 PRR16Q569H4 304 aa11.71□□□□□ -0.54
ACTN1-216ENST00000556083 U2AF1L4Q8WU68 220 aaKnown RBP11.71□□□□□ -0.54
ACTN1-216ENST00000556083 EPSTI1Q96J88 318 aa11.71□□□□□ -0.54
ACTN1-216ENST00000556083 INO80BQ9C086 356 aaPredicted RBP11.71□□□□□ -0.54
ACTN1-216ENST00000556083 VPS37BQ9H9H4 285 aa11.71□□□□□ -0.54
ACTN1-216ENST00000556083 TTI1O43156 1089 aa11.71□□□□□ -0.54
ACTN1-216ENST00000556083 HSPA2P54652 639 aa11.71□□□□□ -0.54
ACTN1-216ENST00000556083 GRM1Q13255 1194 aa11.71□□□□□ -0.54
ACTN1-216ENST00000556083 CCDC93Q567U6 631 aa11.71□□□□□ -0.54
ACTN1-216ENST00000556083 RAB44Q7Z6P3 723 aaPredicted RBP11.71□□□□□ -0.54
ACTN1-216ENST00000556083 PHKBQ93100 1093 aa11.71□□□□□ -0.54
ACTN1-216ENST00000556083 DDX41Q9UJV9 622 aaKnown RBP11.71□□□□□ -0.54
ACTN1-216ENST00000556083 PCK1P35558 622 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 SPOUT1Q5T280 376 aaKnown RBP11.7□□□□□ -0.54
ACTN1-216ENST00000556083 PPP1R18Q6NYC8 613 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 ARMCX2Q7L311 632 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 DGKHQ86XP1 1220 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 RNF10Q8N5U6 811 aaKnown RBP11.7□□□□□ -0.54
ACTN1-216ENST00000556083 SAMD9Q5K651 1589 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-216ENST00000556083 KRIT1O00522 736 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 PPEF1O14829 653 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-216ENST00000556083 WDR46O15213 610 aaKnown RBP11.7□□□□□ -0.54
ACTN1-216ENST00000556083 S100BP04271 92 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-216ENST00000556083 IFNAR1P17181 557 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 BFSP1Q12934 665 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 MAN2A1Q16706 1144 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 FAM71BQ8TC56 605 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 LARP4BQ92615 738 aaKnown RBP11.7□□□□□ -0.54
ACTN1-216ENST00000556083 MED10Q9BTT4 135 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 COA1Q9GZY4 146 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 PPANQ9NQ55 473 aaKnown RBP11.7□□□□□ -0.54
ACTN1-216ENST00000556083 SYNMO15061 1565 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 NELFCDQ8IXH7 590 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 NDUFAF2Q8N183 169 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 FNBP4Q8N3X1 1017 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-216ENST00000556083 FAM96AQ9H5X1 160 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 PI4KBQ9UBF8 816 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 SERPINB13Q9UIV8 391 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 SLC8A2Q9UPR5 921 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 USTQ9Y2C2 406 aa11.7□□□□□ -0.54
ACTN1-216ENST00000556083 TTC37Q6PGP7 1564 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 TBC1D8O95759 1140 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 FGAP02671 866 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 ATF2P15336 505 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 STMN1P16949 149 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 ABI1Q8IZP0 508 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 EAF2Q96CJ1 260 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-216ENST00000556083 PBKQ96KB5 322 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 SLF1Q9BQI6 1058 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 THEGQ9P2T0 379 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 GCC2Q8IWJ2 1684 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 KDM5CP41229 1560 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 CCND2P30279 289 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 EP400NLQ6ZTU2 488 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 IL17REQ8NFR9 667 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 TCP11Q8WWU5 503 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 GINS2Q9Y248 185 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 IPO5O00410 1097 aaKnown RBP11.69□□□□□ -0.54
ACTN1-216ENST00000556083 MGEA5O60502 916 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 SETSIPP0DME0 302 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 HPDP32754 393 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-216ENST00000556083 CTNNA1P35221 906 aaKnown RBP11.69□□□□□ -0.54
ACTN1-216ENST00000556083 LRRC63Q05C16 580 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 ME3Q16798 604 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 LRCH2Q5VUJ6 765 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 KRT39Q6A163 491 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 TYW1BQ6NUM6 668 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 RABGGTAQ92696 567 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 SDCCAG3Q96C92 435 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 FAM207AQ9NSI2 230 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-216ENST00000556083 ANAPC5Q9UJX4 755 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 KCNJ14Q9UNX9 436 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 ZNF131P52739 623 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 MTX1Q13505 466 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 XPO4Q9C0E2 1151 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms