RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	SRBD1	Q8N5C6	995 aa	Known RBP	13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	RASSF4	Q9H2L5	321 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	KCNK9	Q9NPC2	374 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	RWDD2A	Q9UIY3	292 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	SPATA31A5	Q5VU36	1347 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	SPATA31A7	Q8IWB4	1347 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	RXRB	P28702	533 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	TROAP	Q12815	778 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	GRAP	Q13588	217 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	TUBB2A	Q13885	445 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	NEK11	Q8NG66	645 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	SPATA20	Q8TB22	786 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	GRAPL	Q8TC17	118 aa	Predicted RBP	13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	TUBB2B	Q9BVA1	445 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	FAM53C	Q9NYF3	392 aa		13.63	□□□□□ -0.23
TMPO-212	ENST00000556029	SLC1A4	P43007	532 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	CKAP4	Q07065	602 aa	Known RBP	13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	TTC31	Q49AM3	519 aa	Predicted RBP	13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	INTS5	Q6P9B9	1019 aa	Known RBP	13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	PTF1A	Q7RTS3	328 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	TBC1D22A	Q8WUA7	517 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	TEKT1	Q969V4	418 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	FAM84B	Q96KN1	310 aa	Predicted RBP	13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	NID2	Q14112	1375 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	CCDC151	A5D8V7	595 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	CCNT1	O60563	726 aa	Known RBP	13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	NTSR2	O95665	410 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	TBC1D8	O95759	1140 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	GNA11	P29992	359 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	TRAPPC10	P48553	1259 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	VAV2	P52735	878 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	PTPRO	Q16827	1216 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	BLID	Q8IZY5	108 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	CCDC155	Q8N6L0	562 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	RIOK1	Q9BRS2	568 aa	Known RBP	13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	CLRN2	A0PK11	232 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	NDUFAB1	O14561	156 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	GYPC	P04921	128 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	PDE6B	P35913	854 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	RAPGEF1	Q13905	1077 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	CDKAL1	Q5VV42	579 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	CCDC121	Q6ZUS5	278 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	HDX	Q7Z353	690 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	EHBP1	Q8NDI1	1231 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	LEMD3	Q9Y2U8	911 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	UBR2	Q8IWV8	1755 aa		13.62	□□□□□ -0.23
TMPO-212	ENST00000556029	MYH7	P12883	1935 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	TCP10L2	B9ZVM9	353 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	KLRF2	D3W0D1	207 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	TBCA	O75347	108 aa	Known RBP	13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	POLD1	P28340	1107 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	TBC1D8B	Q0IIM8	1120 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	TNIP1	Q15025	636 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	CFAP58	Q5T655	872 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	RSRC2	Q7L4I2	434 aa	Known RBP	13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	GDA	Q9Y2T3	454 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	IKBKG	Q9Y6K9	419 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	WTIP	A6NIX2	430 aa	Predicted RBP	13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	WNT7A	O00755	349 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	NAA25	Q14CX7	972 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	TCP11X2	Q5H9J9	407 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	RASGRP2	Q7LDG7	609 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	FAM114A1	Q8IWE2	563 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	ABHD10	Q9NUJ1	306 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	BIN2	Q9UBW5	565 aa	Predicted RBP	13.61	□□□□□ -0.23
TMPO-212	ENST00000556029		A0A0U1RQJ8	604 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	TUBB4B	P68371	445 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	SP4	Q02446	784 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	RAD51AP2	Q09MP3	1159 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	VPS72	Q15906	364 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	TXNRD1	Q16881	649 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	SH3RF1	Q7Z6J0	888 aa		13.61	□□□□□ -0.23
TMPO-212	ENST00000556029	LONP1	P36776	959 aa	Known RBP	13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	AKAP11	Q9UKA4	1901 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	FAM196B	A6NMK8	535 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	EEF2	P13639	858 aa	Known RBP	13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	KLRK1	P26718	216 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	CYP2C19	P33261	490 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	INF2	Q27J81	1249 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	TCHP	Q9BT92	498 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	ZBTB21	Q9ULJ3	1066 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	BCS1L	Q9Y276	419 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	CNTNAP5	Q8WYK1	1306 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	SPDYE3	A6NKU9	549 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	RAD17	O75943	681 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	SASH3	O75995	380 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	ACTN2	P35609	894 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	PFKFB3	Q16875	520 aa	Predicted RBP	13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	CPXCR1	Q8N123	301 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	COMMD10	Q9Y6G5	202 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.6	□□□□□ -0.23
TMPO-212	ENST00000556029		H7C1D1	291 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	KIF4A	O95239	1232 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	DES	P17661	470 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	CCDC174	Q6PII3	467 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms