RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TANC1Q9C0D5 1861 aa16.97■□□□□ 0.31
CHMP4BP1-201ENST00000556017 ALDH5A1P51649 535 aaPredicted RBP16.97■□□□□ 0.31
CHMP4BP1-201ENST00000556017 CCL23P55773 120 aa16.97■□□□□ 0.31
CHMP4BP1-201ENST00000556017 PPP4R3BQ5MIZ7 849 aa16.97■□□□□ 0.31
CHMP4BP1-201ENST00000556017 SLC30A10Q6XR72 485 aa16.97■□□□□ 0.31
CHMP4BP1-201ENST00000556017 NOL8Q76FK4 1167 aaKnown RBP16.97■□□□□ 0.31
CHMP4BP1-201ENST00000556017 OTOP2Q7RTS6 562 aa16.97■□□□□ 0.31
CHMP4BP1-201ENST00000556017 AP5M1Q9H0R1 490 aa16.97■□□□□ 0.31
CHMP4BP1-201ENST00000556017 ALDH8A1Q9H2A2 487 aaPredicted RBP16.97■□□□□ 0.31
CHMP4BP1-201ENST00000556017 HELLSQ9NRZ9 838 aa16.97■□□□□ 0.31
CHMP4BP1-201ENST00000556017 TCP11L1Q9NUJ3 509 aa16.97■□□□□ 0.31
CHMP4BP1-201ENST00000556017 LAMA4Q16363 1823 aa16.97■□□□□ 0.31
CHMP4BP1-201ENST00000556017 FRMPD2Q68DX3 1309 aaPredicted RBP16.96■□□□□ 0.31
CHMP4BP1-201ENST00000556017 SNHG28P0DPA3 235 aa16.96■□□□□ 0.31
CHMP4BP1-201ENST00000556017 HSPD1P10809 573 aaKnown RBP16.96■□□□□ 0.31
CHMP4BP1-201ENST00000556017 PDHBP11177 359 aa16.96■□□□□ 0.31
CHMP4BP1-201ENST00000556017 PURAQ00577 322 aaKnown RBP16.96■□□□□ 0.31
CHMP4BP1-201ENST00000556017 CCDC96Q2M329 555 aa16.96■□□□□ 0.31
CHMP4BP1-201ENST00000556017 SYDE2Q5VT97 1194 aa16.96■□□□□ 0.31
CHMP4BP1-201ENST00000556017 KIAA1211Q6ZU35 1233 aa16.96■□□□□ 0.31
CHMP4BP1-201ENST00000556017 EVI5LQ96CN4 794 aa16.96■□□□□ 0.31
CHMP4BP1-201ENST00000556017 SCLYQ96I15 445 aa16.96■□□□□ 0.31
CHMP4BP1-201ENST00000556017 NKX2-4Q9H2Z4 354 aa16.96■□□□□ 0.31
CHMP4BP1-201ENST00000556017 TRIP12Q14669 1992 aaPredicted RBP16.96■□□□□ 0.31
CHMP4BP1-201ENST00000556017 ZMYM6O95789 1325 aa16.96■□□□□ 0.3
CHMP4BP1-201ENST00000556017 FGBP02675 491 aa16.95■□□□□ 0.3
CHMP4BP1-201ENST00000556017 TOP1P11387 765 aaKnown RBP16.95■□□□□ 0.3
CHMP4BP1-201ENST00000556017 EDNRBP24530 442 aa16.95■□□□□ 0.3
CHMP4BP1-201ENST00000556017 AKNAD1Q5T1N1 836 aa16.95■□□□□ 0.3
CHMP4BP1-201ENST00000556017 ANKRD45Q5TZF3 282 aa16.95■□□□□ 0.3
CHMP4BP1-201ENST00000556017 WDR11Q9BZH6 1224 aa16.95■□□□□ 0.3
CHMP4BP1-201ENST00000556017 GPCPD1Q9NPB8 672 aa16.95■□□□□ 0.3
CHMP4BP1-201ENST00000556017 TRMT13Q9NUP7 481 aaKnown RBP16.95■□□□□ 0.3
CHMP4BP1-201ENST00000556017 KIAA1217Q5T5P2 1943 aa16.95■□□□□ 0.3
CHMP4BP1-201ENST00000556017 LOC102724159A0A0B4J2E5 919 aa16.94■□□□□ 0.3
CHMP4BP1-201ENST00000556017 RBAK-RBAKDNI3L0D1 243 aa16.94■□□□□ 0.3
CHMP4BP1-201ENST00000556017 CYP2C9P11712 490 aa16.94■□□□□ 0.3
CHMP4BP1-201ENST00000556017 MYOGP15173 224 aa16.94■□□□□ 0.3
CHMP4BP1-201ENST00000556017 RABGGTBP53611 331 aa16.94■□□□□ 0.3
CHMP4BP1-201ENST00000556017 RRP1P56182 461 aaKnown RBP16.94■□□□□ 0.3
CHMP4BP1-201ENST00000556017 ZNF543Q08ER8 600 aa16.94■□□□□ 0.3
CHMP4BP1-201ENST00000556017 NMIQ13287 307 aaPredicted RBP16.94■□□□□ 0.3
CHMP4BP1-201ENST00000556017 PWP2Q15269 919 aaKnown RBP16.94■□□□□ 0.3
CHMP4BP1-201ENST00000556017 TJAP1Q5JTD0 557 aa16.94■□□□□ 0.3
CHMP4BP1-201ENST00000556017 TBC1D10CQ8IV04 446 aa16.94■□□□□ 0.3
CHMP4BP1-201ENST00000556017 PPP1R13LQ8WUF5 828 aa16.94■□□□□ 0.3
CHMP4BP1-201ENST00000556017 SEZ6LQ9BYH1 1024 aa16.94■□□□□ 0.3
CHMP4BP1-201ENST00000556017 PRRC2BQ5JSZ5 2229 aaKnown RBP16.94■□□□□ 0.3
CHMP4BP1-201ENST00000556017 HAND2P61296 217 aa16.93■□□□□ 0.3
CHMP4BP1-201ENST00000556017 TTLL4Q14679 1199 aa16.93■□□□□ 0.3
CHMP4BP1-201ENST00000556017 MCMDC2Q4G0Z9 681 aa16.93■□□□□ 0.3
CHMP4BP1-201ENST00000556017 COPS5Q92905 334 aa16.93■□□□□ 0.3
CHMP4BP1-201ENST00000556017 CRBNQ96SW2 442 aa16.93■□□□□ 0.3
CHMP4BP1-201ENST00000556017 MYH6P13533 1939 aa16.93■□□□□ 0.3
CHMP4BP1-201ENST00000556017 TCF20Q9UGU0 1960 aaKnown RBP16.92■□□□□ 0.3
CHMP4BP1-201ENST00000556017 ZEB2O60315 1214 aa16.92■□□□□ 0.3
CHMP4BP1-201ENST00000556017 ARIH2O95376 493 aa16.92■□□□□ 0.3
CHMP4BP1-201ENST00000556017 RPS6P62753 249 aaKnown RBP16.92■□□□□ 0.3
CHMP4BP1-201ENST00000556017 HDAC1Q13547 482 aaPredicted RBP16.92■□□□□ 0.3
CHMP4BP1-201ENST00000556017 RAB30Q15771 203 aa16.92■□□□□ 0.3
CHMP4BP1-201ENST00000556017 RRP12Q5JTH9 1297 aaKnown RBP16.92■□□□□ 0.3
CHMP4BP1-201ENST00000556017 PPM1EQ8WY54 764 aa16.92■□□□□ 0.3
CHMP4BP1-201ENST00000556017 SYMPKQ92797 1274 aaKnown RBP16.92■□□□□ 0.3
CHMP4BP1-201ENST00000556017 CTAGE1Q96RT6 745 aa16.92■□□□□ 0.3
CHMP4BP1-201ENST00000556017 GAS2L1Q99501 681 aaPredicted RBP16.92■□□□□ 0.3
CHMP4BP1-201ENST00000556017 CPVLQ9H3G5 476 aa16.92■□□□□ 0.3
CHMP4BP1-201ENST00000556017 ADD3Q9UEY8 706 aaKnown RBP16.92■□□□□ 0.3
CHMP4BP1-201ENST00000556017 TNKSO95271 1327 aa16.92■□□□□ 0.3
CHMP4BP1-201ENST00000556017 WDR19Q8NEZ3 1342 aa16.92■□□□□ 0.3
CHMP4BP1-201ENST00000556017 PTPDC1A2A3K4 754 aa16.91■□□□□ 0.3
CHMP4BP1-201ENST00000556017 A6NJR5 290 aa16.91■□□□□ 0.3
CHMP4BP1-201ENST00000556017 ARHGEF15O94989 841 aa16.91■□□□□ 0.3
CHMP4BP1-201ENST00000556017 NBPF20Q3BBV1 942 aa16.91■□□□□ 0.3
CHMP4BP1-201ENST00000556017 TICAM2Q86XR7 235 aa16.91■□□□□ 0.3
CHMP4BP1-201ENST00000556017 TBC1D5Q92609 795 aa16.91■□□□□ 0.3
CHMP4BP1-201ENST00000556017 MSRAQ9UJ68 235 aa16.91■□□□□ 0.3
CHMP4BP1-201ENST00000556017 NEDD4P46934 1319 aa16.91■□□□□ 0.3
CHMP4BP1-201ENST00000556017 CALML3P27482 149 aa16.9■□□□□ 0.3
CHMP4BP1-201ENST00000556017 GPNMBQ14956 572 aa16.9■□□□□ 0.3
CHMP4BP1-201ENST00000556017 RNF207Q6ZRF8 634 aa16.9■□□□□ 0.3
CHMP4BP1-201ENST00000556017 TTC14Q96N46 770 aa16.9■□□□□ 0.3
CHMP4BP1-201ENST00000556017 POLR3EQ9NVU0 708 aa16.9■□□□□ 0.3
CHMP4BP1-201ENST00000556017 CCDC171Q6TFL3 1326 aa16.9■□□□□ 0.3
CHMP4BP1-201ENST00000556017 MYL3P08590 195 aa16.89■□□□□ 0.29
CHMP4BP1-201ENST00000556017 CCDC85BQ15834 202 aaPredicted RBP16.89■□□□□ 0.29
CHMP4BP1-201ENST00000556017 CCDC62Q6P9F0 684 aa16.89■□□□□ 0.29
CHMP4BP1-201ENST00000556017 OR6J1Q8NGC5 347 aa16.89■□□□□ 0.29
CHMP4BP1-201ENST00000556017 ATXN2LQ8WWM7 1075 aaKnown RBP16.89■□□□□ 0.29
CHMP4BP1-201ENST00000556017 ASB2Q96Q27 587 aa16.89■□□□□ 0.29
CHMP4BP1-201ENST00000556017 MTG1Q9BT17 334 aaPredicted RBP16.89■□□□□ 0.29
CHMP4BP1-201ENST00000556017 SLC28A3Q9HAS3 691 aa16.89■□□□□ 0.29
CHMP4BP1-201ENST00000556017 TOMM22Q9NS69 142 aa16.89■□□□□ 0.29
CHMP4BP1-201ENST00000556017 COL20A1Q9P218 1284 aa16.89■□□□□ 0.29
CHMP4BP1-201ENST00000556017 PCDHA11Q9Y5I1 949 aa16.89■□□□□ 0.29
CHMP4BP1-201ENST00000556017 SLC4A7Q9Y6M7 1214 aa16.89■□□□□ 0.29
CHMP4BP1-201ENST00000556017 MYH7BA7E2Y1 1941 aa16.89■□□□□ 0.29
CHMP4BP1-201ENST00000556017 EPOPA6NHQ4 379 aa16.88■□□□□ 0.29
CHMP4BP1-201ENST00000556017 GOLGA8HP0CJ92 632 aa16.88■□□□□ 0.29
CHMP4BP1-201ENST00000556017 CPT1AP50416 773 aa16.88■□□□□ 0.29
CHMP4BP1-201ENST00000556017 RPUSD2Q8IZ73 545 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms