RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 DGKHQ86XP1 1220 aa23.16■■□□□ 1.3
PRKCH-219ENST00000555906 TTYH1Q9H313 450 aaPredicted RBP23.16■■□□□ 1.3
PRKCH-219ENST00000555906 SEMA6BQ9H3T3 888 aa23.16■■□□□ 1.3
PRKCH-219ENST00000555906 DLL1O00548 723 aa23.15■■□□□ 1.3
PRKCH-219ENST00000555906 DYNC1LI2O43237 492 aaPredicted RBP23.15■■□□□ 1.3
PRKCH-219ENST00000555906 PTGS1P23219 599 aa23.15■■□□□ 1.3
PRKCH-219ENST00000555906 DUSP28Q4G0W2 176 aa23.15■■□□□ 1.3
PRKCH-219ENST00000555906 CCDC178Q5BJE1 867 aa23.15■■□□□ 1.3
PRKCH-219ENST00000555906 IQCA1Q86XH1 822 aa23.15■■□□□ 1.3
PRKCH-219ENST00000555906 CDX2Q99626 313 aaPredicted RBP23.15■■□□□ 1.3
PRKCH-219ENST00000555906 DSCC1Q9BVC3 393 aa23.15■■□□□ 1.3
PRKCH-219ENST00000555906 SCN10AQ9Y5Y9 1956 aa23.14■■□□□ 1.3
PRKCH-219ENST00000555906 ITGA7Q13683 1181 aa23.14■■□□□ 1.29
PRKCH-219ENST00000555906 RNF207Q6ZRF8 634 aa23.14■■□□□ 1.29
PRKCH-219ENST00000555906 KIAA1211Q6ZU35 1233 aa23.14■■□□□ 1.29
PRKCH-219ENST00000555906 TMEM199Q8N511 208 aa23.14■■□□□ 1.29
PRKCH-219ENST00000555906 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.14■■□□□ 1.29
PRKCH-219ENST00000555906 ZKSCAN3Q9BRR0 538 aa23.14■■□□□ 1.29
PRKCH-219ENST00000555906 PPP1R12CQ9BZL4 782 aa23.14■■□□□ 1.29
PRKCH-219ENST00000555906 RBM47A0AV96 593 aaKnown RBP23.13■■□□□ 1.29
PRKCH-219ENST00000555906 KDM4AO75164 1064 aa23.13■■□□□ 1.29
PRKCH-219ENST00000555906 CALML3P27482 149 aa23.13■■□□□ 1.29
PRKCH-219ENST00000555906 PSRC1Q6PGN9 363 aaPredicted RBP23.13■■□□□ 1.29
PRKCH-219ENST00000555906 PNMA1Q8ND90 353 aa23.13■■□□□ 1.29
PRKCH-219ENST00000555906 MPHOSPH6Q99547 160 aaKnown RBP23.13■■□□□ 1.29
PRKCH-219ENST00000555906 GRIN2DO15399 1336 aa23.12■■□□□ 1.29
PRKCH-219ENST00000555906 CSF2RAP15509 400 aa23.12■■□□□ 1.29
PRKCH-219ENST00000555906 EDNRBP24530 442 aa23.12■■□□□ 1.29
PRKCH-219ENST00000555906 RPS6P62753 249 aaKnown RBP23.12■■□□□ 1.29
PRKCH-219ENST00000555906 TMEM63BQ5T3F8 832 aa23.12■■□□□ 1.29
PRKCH-219ENST00000555906 DNERQ8NFT8 737 aa23.12■■□□□ 1.29
PRKCH-219ENST00000555906 ANKS1AQ92625 1134 aa23.12■■□□□ 1.29
PRKCH-219ENST00000555906 WDR11Q9BZH6 1224 aa23.12■■□□□ 1.29
PRKCH-219ENST00000555906 KIAA1217Q5T5P2 1943 aa23.12■■□□□ 1.29
PRKCH-219ENST00000555906 GBF1Q92538 1859 aa23.11■■□□□ 1.29
PRKCH-219ENST00000555906 TANC1Q9C0D5 1861 aa23.11■■□□□ 1.29
PRKCH-219ENST00000555906 PRUNE2Q8WUY3 3088 aa23.11■■□□□ 1.29
PRKCH-219ENST00000555906 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.11■■□□□ 1.29
PRKCH-219ENST00000555906 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.11■■□□□ 1.29
PRKCH-219ENST00000555906 GOLGA8HP0CJ92 632 aa23.11■■□□□ 1.29
PRKCH-219ENST00000555906 DNAJB2P25686 324 aa23.11■■□□□ 1.29
PRKCH-219ENST00000555906 IMMTQ16891 758 aaKnown RBP23.11■■□□□ 1.29
PRKCH-219ENST00000555906 TMEM240Q5SV17 173 aa23.11■■□□□ 1.29
PRKCH-219ENST00000555906 RASIP1Q5U651 963 aa23.11■■□□□ 1.29
PRKCH-219ENST00000555906 MAF1Q9H063 256 aa23.11■■□□□ 1.29
PRKCH-219ENST00000555906 KAT14Q9H8E8 782 aa23.11■■□□□ 1.29
PRKCH-219ENST00000555906 B4E1Z4 1266 aa23.1■■□□□ 1.29
PRKCH-219ENST00000555906 CPT1AP50416 773 aa23.1■■□□□ 1.29
PRKCH-219ENST00000555906 PDE4DQ08499 809 aa23.1■■□□□ 1.29
PRKCH-219ENST00000555906 CDC37Q16543 378 aaPredicted RBP23.1■■□□□ 1.29
PRKCH-219ENST00000555906 ASPRV1Q53RT3 343 aa23.1■■□□□ 1.29
PRKCH-219ENST00000555906 C16orf59Q7L2K0 433 aa23.1■■□□□ 1.29
PRKCH-219ENST00000555906 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.1■■□□□ 1.29
PRKCH-219ENST00000555906 ENAHQ8N8S7 591 aaPredicted RBP23.1■■□□□ 1.29
PRKCH-219ENST00000555906 ZSCAN10Q96SZ4 725 aaPredicted RBP23.1■■□□□ 1.29
PRKCH-219ENST00000555906 HIPK3Q9H422 1215 aa23.1■■□□□ 1.29
PRKCH-219ENST00000555906 POLR3EQ9NVU0 708 aa23.1■■□□□ 1.29
PRKCH-219ENST00000555906 CTNNA3Q9UI47 895 aa23.1■■□□□ 1.29
PRKCH-219ENST00000555906 TNKSO95271 1327 aa23.09■■□□□ 1.29
PRKCH-219ENST00000555906 NKRFO15226 690 aaKnown RBP eCLIP23.09■■□□□ 1.29
PRKCH-219ENST00000555906 B4GALT4O60513 344 aa23.09■■□□□ 1.29
PRKCH-219ENST00000555906 CYP2C18P33260 490 aa23.09■■□□□ 1.29
PRKCH-219ENST00000555906 PPP2R5BQ15173 497 aa23.09■■□□□ 1.29
PRKCH-219ENST00000555906 USH1GQ495M9 461 aa23.09■■□□□ 1.29
PRKCH-219ENST00000555906 RGS22Q8NE09 1264 aa23.09■■□□□ 1.29
PRKCH-219ENST00000555906 MYLIPQ8WY64 445 aa23.09■■□□□ 1.29
PRKCH-219ENST00000555906 KRT23Q9C075 422 aa23.09■■□□□ 1.29
PRKCH-219ENST00000555906 CNNM2Q9H8M5 875 aa23.09■■□□□ 1.29
PRKCH-219ENST00000555906 IL23AQ9NPF7 189 aa23.09■■□□□ 1.29
PRKCH-219ENST00000555906 ABCB11O95342 1321 aa23.08■■□□□ 1.29
PRKCH-219ENST00000555906 RAD50Q92878 1312 aa23.08■■□□□ 1.29
PRKCH-219ENST00000555906 B4DLN1 442 aa23.08■■□□□ 1.29
PRKCH-219ENST00000555906 MRPL12P52815 198 aaKnown RBP23.08■■□□□ 1.29
PRKCH-219ENST00000555906 PSMC6P62333 389 aa23.08■■□□□ 1.29
PRKCH-219ENST00000555906 OR6J1Q8NGC5 347 aa23.08■■□□□ 1.29
PRKCH-219ENST00000555906 MAFAQ8NHW3 353 aaPredicted RBP23.08■■□□□ 1.29
PRKCH-219ENST00000555906 SCFD2Q8WU76 684 aa23.08■■□□□ 1.29
PRKCH-219ENST00000555906 NOC4LQ9BVI4 516 aaKnown RBP23.08■■□□□ 1.29
PRKCH-219ENST00000555906 UBA5Q9GZZ9 404 aa23.08■■□□□ 1.29
PRKCH-219ENST00000555906 CPVLQ9H3G5 476 aa23.08■■□□□ 1.29
PRKCH-219ENST00000555906 FOSL2P15408 326 aa23.07■■□□□ 1.28
PRKCH-219ENST00000555906 PURAQ00577 322 aaKnown RBP23.07■■□□□ 1.28
PRKCH-219ENST00000555906 ALDH8A1Q9H2A2 487 aaPredicted RBP23.07■■□□□ 1.28
PRKCH-219ENST00000555906 ZSWIM5Q9P217 1185 aa23.07■■□□□ 1.28
PRKCH-219ENST00000555906 UMODL1Q5DID0 1318 aa23.07■■□□□ 1.28
PRKCH-219ENST00000555906 VCANP13611 3396 aa23.06■■□□□ 1.28
PRKCH-219ENST00000555906 CHD9Q3L8U1 2897 aa23.06■■□□□ 1.28
PRKCH-219ENST00000555906 ACRP10323 421 aa23.06■■□□□ 1.28
PRKCH-219ENST00000555906 BRDTQ58F21 947 aaPredicted RBP23.06■■□□□ 1.28
PRKCH-219ENST00000555906 ZNF365Q70YC5 407 aa23.06■■□□□ 1.28
PRKCH-219ENST00000555906 ADGRF4Q8IZF3 695 aa23.06■■□□□ 1.28
PRKCH-219ENST00000555906 TIFAQ96CG3 184 aa23.06■■□□□ 1.28
PRKCH-219ENST00000555906 UBAC1Q9BSL1 405 aa23.06■■□□□ 1.28
PRKCH-219ENST00000555906 TRPV6Q9H1D0 765 aa23.06■■□□□ 1.28
PRKCH-219ENST00000555906 IL25Q9H293 177 aa23.06■■□□□ 1.28
PRKCH-219ENST00000555906 MTIF3Q9H2K0 278 aaKnown RBP23.06■■□□□ 1.28
PRKCH-219ENST00000555906 PARP1P09874 1014 aaKnown RBP23.05■■□□□ 1.28
PRKCH-219ENST00000555906 GSPT1P15170 499 aaKnown RBP23.05■■□□□ 1.28
PRKCH-219ENST00000555906 HERVK_113Q902F9 699 aa23.05■■□□□ 1.28
PRKCH-219ENST00000555906 MTG1Q9BT17 334 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms