RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 TAPT1Q6NXT6 567 aa28.52■■■□□ 2.16
PRKCH-216ENST00000555542 MORC4Q8TE76 937 aa28.52■■■□□ 2.16
PRKCH-216ENST00000555542 TMEM39AQ9NV64 488 aa28.52■■■□□ 2.16
PRKCH-216ENST00000555542 GNEQ9Y223 722 aaKnown RBP28.52■■■□□ 2.16
PRKCH-216ENST00000555542 MROH7Q68CQ1 1323 aa28.51■■■□□ 2.15
PRKCH-216ENST00000555542 TRIM43BA6NCK2 446 aa28.51■■■□□ 2.15
PRKCH-216ENST00000555542 B4DLN1 442 aa28.51■■■□□ 2.15
PRKCH-216ENST00000555542 E7EWF7 191 aa28.51■■■□□ 2.15
PRKCH-216ENST00000555542 DYNC1LI2O43237 492 aaPredicted RBP28.51■■■□□ 2.15
PRKCH-216ENST00000555542 ZEB2O60315 1214 aa28.51■■■□□ 2.15
PRKCH-216ENST00000555542 MRPL12P52815 198 aaKnown RBP28.51■■■□□ 2.15
PRKCH-216ENST00000555542 QRICH1Q2TAL8 776 aa28.51■■■□□ 2.15
PRKCH-216ENST00000555542 CENPQQ7L2Z9 268 aaPredicted RBP28.51■■■□□ 2.15
PRKCH-216ENST00000555542 TRIM43Q96BQ3 446 aaPredicted RBP28.51■■■□□ 2.15
PRKCH-216ENST00000555542 A0A0U1RQG5 324 aaPredicted RBP28.5■■■□□ 2.15
PRKCH-216ENST00000555542 RAG1P15918 1043 aa28.5■■■□□ 2.15
PRKCH-216ENST00000555542 FSCN1Q16658 493 aaKnown RBP28.5■■■□□ 2.15
PRKCH-216ENST00000555542 FBXO11Q86XK2 927 aa28.5■■■□□ 2.15
PRKCH-216ENST00000555542 DNERQ8NFT8 737 aa28.5■■■□□ 2.15
PRKCH-216ENST00000555542 RBM8AQ9Y5S9 174 aaKnown RBP28.5■■■□□ 2.15
PRKCH-216ENST00000555542 KLRF2D3W0D1 207 aa28.49■■■□□ 2.15
PRKCH-216ENST00000555542 WTAPQ15007 396 aa28.49■■■□□ 2.15
PRKCH-216ENST00000555542 CHST3Q7LGC8 479 aa28.49■■■□□ 2.15
PRKCH-216ENST00000555542 ANKRD33Q7Z3H0 272 aa28.49■■■□□ 2.15
PRKCH-216ENST00000555542 MCF2L2Q86YR7 1114 aa28.49■■■□□ 2.15
PRKCH-216ENST00000555542 STAG2Q8N3U4 1231 aa28.49■■■□□ 2.15
PRKCH-216ENST00000555542 MAP4K1Q92918 833 aa28.49■■■□□ 2.15
PRKCH-216ENST00000555542 TOX2Q96NM4 488 aa28.49■■■□□ 2.15
PRKCH-216ENST00000555542 JMJD4Q9H9V9 463 aa28.49■■■□□ 2.15
PRKCH-216ENST00000555542 CTAGE5O15320 804 aa28.48■■■□□ 2.15
PRKCH-216ENST00000555542 PTGS1P23219 599 aa28.48■■■□□ 2.15
PRKCH-216ENST00000555542 CXCL17Q6UXB2 119 aa28.48■■■□□ 2.15
PRKCH-216ENST00000555542 RGS22Q8NE09 1264 aa28.48■■■□□ 2.15
PRKCH-216ENST00000555542 WDR11Q9BZH6 1224 aa28.48■■■□□ 2.15
PRKCH-216ENST00000555542 MRPL11Q9Y3B7 192 aaKnown RBP28.48■■■□□ 2.15
PRKCH-216ENST00000555542 Q9Y3F1 56 aa28.48■■■□□ 2.15
PRKCH-216ENST00000555542 TAF6LQ9Y6J9 622 aa28.48■■■□□ 2.15
PRKCH-216ENST00000555542 NKX3-2P78367 333 aa28.47■■■□□ 2.15
PRKCH-216ENST00000555542 FAAP100Q0VG06 881 aa28.47■■■□□ 2.15
PRKCH-216ENST00000555542 TMEM67Q5HYA8 995 aa28.47■■■□□ 2.15
PRKCH-216ENST00000555542 ARVCFO00192 962 aa28.46■■■□□ 2.15
PRKCH-216ENST00000555542 KIAA0355O15063 1070 aa28.46■■■□□ 2.15
PRKCH-216ENST00000555542 TLR3O15455 904 aaKnown RBP28.46■■■□□ 2.15
PRKCH-216ENST00000555542 DUSP28Q4G0W2 176 aa28.46■■■□□ 2.15
PRKCH-216ENST00000555542 TMEM63BQ5T3F8 832 aa28.46■■■□□ 2.15
PRKCH-216ENST00000555542 STOX1Q6ZVD7 989 aa28.46■■■□□ 2.15
PRKCH-216ENST00000555542 AMNQ9BXJ7 453 aa28.46■■■□□ 2.15
PRKCH-216ENST00000555542 MAD2L2Q9UI95 211 aa28.46■■■□□ 2.15
PRKCH-216ENST00000555542 CABYRO75952 493 aa28.45■■■□□ 2.14
PRKCH-216ENST00000555542 ESYT1Q9BSJ8 1104 aa28.45■■■□□ 2.14
PRKCH-216ENST00000555542 ITGB8P26012 769 aa28.44■■■□□ 2.14
PRKCH-216ENST00000555542 GRM4Q14833 912 aa28.44■■■□□ 2.14
PRKCH-216ENST00000555542 PPP2R5BQ15173 497 aa28.44■■■□□ 2.14
PRKCH-216ENST00000555542 CATIPQ7Z7H3 387 aa28.44■■■□□ 2.14
PRKCH-216ENST00000555542 HOMER1Q86YM7 354 aa28.44■■■□□ 2.14
PRKCH-216ENST00000555542 OR6J1Q8NGC5 347 aa28.44■■■□□ 2.14
PRKCH-216ENST00000555542 TBC1D5Q92609 795 aa28.44■■■□□ 2.14
PRKCH-216ENST00000555542 MAF1Q9H063 256 aa28.44■■■□□ 2.14
PRKCH-216ENST00000555542 PALM3A6NDB9 673 aaPredicted RBP28.43■■■□□ 2.14
PRKCH-216ENST00000555542 CDK7P50613 346 aa28.43■■■□□ 2.14
PRKCH-216ENST00000555542 SHHQ15465 462 aa28.43■■■□□ 2.14
PRKCH-216ENST00000555542 GPR153Q6NV75 609 aa28.43■■■□□ 2.14
PRKCH-216ENST00000555542 CASC1Q6TDU7 716 aa28.43■■■□□ 2.14
PRKCH-216ENST00000555542 SKAP1Q86WV1 359 aa28.43■■■□□ 2.14
PRKCH-216ENST00000555542 SYTL5Q8TDW5 730 aaPredicted RBP28.43■■■□□ 2.14
PRKCH-216ENST00000555542 SCFD2Q8WU76 684 aa28.43■■■□□ 2.14
PRKCH-216ENST00000555542 SENP2Q9HC62 589 aa28.43■■■□□ 2.14
PRKCH-216ENST00000555542 ANO2Q9NQ90 1003 aa28.43■■■□□ 2.14
PRKCH-216ENST00000555542 SZT2Q5T011 3432 aa28.43■■■□□ 2.14
PRKCH-216ENST00000555542 ZBTB5O15062 677 aa28.42■■■□□ 2.14
PRKCH-216ENST00000555542 CFBP00751 764 aa28.42■■■□□ 2.14
PRKCH-216ENST00000555542 EDNRBP24530 442 aa28.42■■■□□ 2.14
PRKCH-216ENST00000555542 CPT1AP50416 773 aa28.42■■■□□ 2.14
PRKCH-216ENST00000555542 FPGSQ05932 587 aa28.42■■■□□ 2.14
PRKCH-216ENST00000555542 NSUN6Q8TEA1 469 aaKnown RBP28.42■■■□□ 2.14
PRKCH-216ENST00000555542 TAAR1Q96RJ0 339 aa28.42■■■□□ 2.14
PRKCH-216ENST00000555542 LAMA3Q16787 3333 aa28.41■■■□□ 2.14
PRKCH-216ENST00000555542 RBM47A0AV96 593 aaKnown RBP28.41■■■□□ 2.14
PRKCH-216ENST00000555542 ITGA7Q13683 1181 aa28.41■■■□□ 2.14
PRKCH-216ENST00000555542 BRDTQ58F21 947 aaPredicted RBP28.41■■■□□ 2.14
PRKCH-216ENST00000555542 BMP2KLQ5H9B9 411 aa28.41■■■□□ 2.14
PRKCH-216ENST00000555542 C9orf50Q5SZB4 431 aa28.41■■■□□ 2.14
PRKCH-216ENST00000555542 MB21D2Q8IYB1 491 aaPredicted RBP28.41■■■□□ 2.14
PRKCH-216ENST00000555542 RMDN3Q96TC7 470 aa28.41■■■□□ 2.14
PRKCH-216ENST00000555542 LSG1Q9H089 658 aaKnown RBP28.41■■■□□ 2.14
PRKCH-216ENST00000555542 GPHNQ9NQX3 736 aaPredicted RBP28.41■■■□□ 2.14
PRKCH-216ENST00000555542 PCDHA1Q9Y5I3 950 aa28.41■■■□□ 2.14
PRKCH-216ENST00000555542 NKRFO15226 690 aaKnown RBP eCLIP28.4■■■□□ 2.14
PRKCH-216ENST00000555542 TXNP10599 105 aaKnown RBP28.4■■■□□ 2.14
PRKCH-216ENST00000555542 ANTXR2P58335 489 aa28.4■■■□□ 2.14
PRKCH-216ENST00000555542 TTLL4Q14679 1199 aa28.4■■■□□ 2.14
PRKCH-216ENST00000555542 ARHGEF16Q5VV41 709 aa28.4■■■□□ 2.14
PRKCH-216ENST00000555542 FAM126BQ8IXS8 530 aa28.4■■■□□ 2.14
PRKCH-216ENST00000555542 DEFB123Q8N688 67 aa28.4■■■□□ 2.14
PRKCH-216ENST00000555542 POLR3EQ9NVU0 708 aa28.4■■■□□ 2.14
PRKCH-216ENST00000555542 TBX21Q9UL17 535 aa28.4■■■□□ 2.14
PRKCH-216ENST00000555542 TIMP1P01033 207 aa28.39■■■□□ 2.14
PRKCH-216ENST00000555542 MYL3P08590 195 aa28.39■■■□□ 2.14
PRKCH-216ENST00000555542 PSMC6P62333 389 aa28.39■■■□□ 2.14
PRKCH-216ENST00000555542 TRAF1Q13077 416 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms