RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 RGS2P41220 211 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 MAP2K5Q13163 448 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 GRB14Q14449 540 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 CCL14Q16627 93 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 SLC9C1Q4G0N8 1177 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 FBXO46Q6PJ61 603 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-213ENST00000555386 HEATR3Q7Z4Q2 680 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 TNS4Q8IZW8 715 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 GPKOWQ92917 476 aaPredicted RBP eCLIP11.36□□□□□ -0.59
PSEN1-213ENST00000555386 SPZ1Q9BXG8 430 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 AMNQ9BXJ7 453 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 SLC26A6Q9BXS9 759 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 ALDH8A1Q9H2A2 487 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-213ENST00000555386 GJD2Q9UKL4 321 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 PCDHA1Q9Y5I3 950 aa11.36□□□□□ -0.59
PSEN1-213ENST00000555386 CNTNAP5Q8WYK1 1306 aa11.35□□□□□ -0.59
PSEN1-213ENST00000555386 KIAA0100Q14667 2235 aaKnown RBP11.35□□□□□ -0.59
PSEN1-213ENST00000555386 STRNO43815 780 aa11.35□□□□□ -0.59
PSEN1-213ENST00000555386 AKAP17AQ02040 695 aaKnown RBP11.35□□□□□ -0.59
PSEN1-213ENST00000555386 CNTN2Q02246 1040 aa11.35□□□□□ -0.59
PSEN1-213ENST00000555386 MORN1Q5T089 497 aa11.35□□□□□ -0.59
PSEN1-213ENST00000555386 FBXL16Q8N461 479 aa11.35□□□□□ -0.59
PSEN1-213ENST00000555386 CHST13Q8NET6 341 aa11.35□□□□□ -0.59
PSEN1-213ENST00000555386 NPLOC4Q8TAT6 608 aa11.35□□□□□ -0.59
PSEN1-213ENST00000555386 SOCS4Q8WXH5 440 aa11.35□□□□□ -0.59
PSEN1-213ENST00000555386 TBC1D5Q92609 795 aa11.35□□□□□ -0.59
PSEN1-213ENST00000555386 ZNF274Q96GC6 653 aaPredicted RBP11.35□□□□□ -0.59
PSEN1-213ENST00000555386 PURBQ96QR8 312 aaKnown RBP11.35□□□□□ -0.59
PSEN1-213ENST00000555386 A1CFQ9NQ94 594 aaKnown RBP11.35□□□□□ -0.59
PSEN1-213ENST00000555386 FBXO40Q9UH90 709 aa11.35□□□□□ -0.59
PSEN1-213ENST00000555386 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
PSEN1-213ENST00000555386 PRPF40AO75400 957 aaKnown RBP11.34□□□□□ -0.59
PSEN1-213ENST00000555386 CFBP00751 764 aa11.34□□□□□ -0.59
PSEN1-213ENST00000555386 GRK4P32298 578 aa11.34□□□□□ -0.59
PSEN1-213ENST00000555386 SCRN1Q12765 414 aa11.34□□□□□ -0.59
PSEN1-213ENST00000555386 TRIM32Q13049 653 aa11.34□□□□□ -0.59
PSEN1-213ENST00000555386 BAATQ14032 418 aaPredicted RBP11.34□□□□□ -0.59
PSEN1-213ENST00000555386 PKN2Q16513 984 aaKnown RBP11.34□□□□□ -0.59
PSEN1-213ENST00000555386 ME3Q16798 604 aa11.34□□□□□ -0.59
PSEN1-213ENST00000555386 TKFCQ3LXA3 575 aa11.34□□□□□ -0.59
PSEN1-213ENST00000555386 SLC30A10Q6XR72 485 aa11.34□□□□□ -0.59
PSEN1-213ENST00000555386 GAS2L3Q86XJ1 694 aa11.34□□□□□ -0.59
PSEN1-213ENST00000555386 CLEC4DQ8WXI8 215 aa11.34□□□□□ -0.59
PSEN1-213ENST00000555386 MTMR8Q96EF0 704 aa11.34□□□□□ -0.59
PSEN1-213ENST00000555386 MRPL11Q9Y3B7 192 aaKnown RBP11.34□□□□□ -0.59
PSEN1-213ENST00000555386 ATP6V1DQ9Y5K8 247 aa11.34□□□□□ -0.59
PSEN1-213ENST00000555386 RBBP6Q7Z6E9 1792 aaKnown RBP11.34□□□□□ -0.59
PSEN1-213ENST00000555386 ABCB11O95342 1321 aa11.34□□□□□ -0.59
PSEN1-213ENST00000555386 FOSBP53539 338 aa11.33□□□□□ -0.6
PSEN1-213ENST00000555386 PRMT2P55345 433 aa11.33□□□□□ -0.6
PSEN1-213ENST00000555386 EVCP57679 992 aa11.33□□□□□ -0.6
PSEN1-213ENST00000555386 CPLX2Q6PUV4 134 aaKnown RBP11.33□□□□□ -0.6
PSEN1-213ENST00000555386 RNF207Q6ZRF8 634 aa11.33□□□□□ -0.6
PSEN1-213ENST00000555386 CCDC83Q8IWF9 413 aa11.33□□□□□ -0.6
PSEN1-213ENST00000555386 TMEM87AQ8NBN3 555 aa11.33□□□□□ -0.6
PSEN1-213ENST00000555386 APBA2Q99767 749 aa11.33□□□□□ -0.6
PSEN1-213ENST00000555386 CYP39A1Q9NYL5 469 aa11.33□□□□□ -0.6
PSEN1-213ENST00000555386 FLRT1Q9NZU1 646 aa11.33□□□□□ -0.6
PSEN1-213ENST00000555386 LCTP09848 1927 aa11.33□□□□□ -0.6
PSEN1-213ENST00000555386 PFKFB2O60825 505 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 HOXA13P31271 388 aaPredicted RBP11.32□□□□□ -0.6
PSEN1-213ENST00000555386 CYP2C19P33261 490 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 RCAN1P53805 252 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 RPS6P62753 249 aaKnown RBP11.32□□□□□ -0.6
PSEN1-213ENST00000555386 SSRP1Q08945 709 aaKnown RBP11.32□□□□□ -0.6
PSEN1-213ENST00000555386 FUT2Q10981 343 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 PPP2R5BQ15173 497 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 ZSCAN23Q3MJ62 389 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 CAVIN1Q6NZI2 390 aaKnown RBP11.32□□□□□ -0.6
PSEN1-213ENST00000555386 FCHSD1Q86WN1 690 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 TRIB2Q92519 343 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 USP6NLQ92738 828 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 SYAP1Q96A49 352 aaPredicted RBP11.32□□□□□ -0.6
PSEN1-213ENST00000555386 PANK2Q9BZ23 570 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 SLC5A4Q9NY91 659 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 PNMA2Q9UL42 364 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 SMC3Q9UQE7 1217 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 PFASO15067 1338 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 INHAP05111 366 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 IFNAR1P17181 557 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 NCLP19338 710 aaKnown RBP11.32□□□□□ -0.6
PSEN1-213ENST00000555386 SMARCA1P28370 1054 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 NAPAP54920 295 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 IRF5Q13568 498 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 NTRK3Q16288 839 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 PRAMEF19Q5SWL8 479 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 WWC2Q6AWC2 1192 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 TRIM22Q8IYM9 498 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 ABRAQ8N0Z2 381 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 SLAIN1Q8ND83 568 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 GPT2Q8TD30 523 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 ANP32BQ92688 251 aaKnown RBP11.32□□□□□ -0.6
PSEN1-213ENST00000555386 GTF3C6Q969F1 213 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 MAML3Q96JK9 1138 aa11.32□□□□□ -0.6
PSEN1-213ENST00000555386 ZNF236Q9UL36 1845 aa11.31□□□□□ -0.6
PSEN1-213ENST00000555386 NID2Q14112 1375 aa11.31□□□□□ -0.6
PSEN1-213ENST00000555386 SOWAHBA6NEL2 793 aa11.31□□□□□ -0.6
PSEN1-213ENST00000555386 CCDC85CA6NKD9 419 aa11.31□□□□□ -0.6
PSEN1-213ENST00000555386 OPLAHO14841 1288 aa11.31□□□□□ -0.6
PSEN1-213ENST00000555386 STX6O43752 255 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms