RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	ZKSCAN2	Q63HK3	967 aa		5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	FTSJ3	Q8IY81	847 aa	Known RBP	5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	FAM43A	Q8N2R8	423 aa		5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	MXD3	Q9BW11	206 aa		5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	ZC3H12C	Q9C0D7	883 aa	Known RBP	5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	TTYH1	Q9H313	450 aa	Predicted RBP	5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	ELP3	Q9H9T3	547 aa		5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	SRRD	Q9UH36	339 aa		5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	DMGDH	Q9UI17	866 aa	Known RBP	5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	TNN	Q9UQP3	1299 aa		5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	MYPN	Q86TC9	1320 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	COL2A1	P02458	1487 aa	Predicted RBP	5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	TAF5L	O75529	589 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	UFL1	O94874	794 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	GHRH	P01286	108 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	UBTFL1	P0CB47	393 aa	Predicted RBP	5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	INPP5B	P32019	993 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	PSMC4	P43686	418 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	ARSD	P51689	593 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	FOXO4	P98177	505 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	SETDB1	Q15047	1291 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	EPHA10	Q5JZY3	1008 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	LDHAL6A	Q6ZMR3	332 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	TMC4	Q7Z404	712 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	NECAB2	Q7Z6G3	386 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	ITPRIP	Q8IWB1	547 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	TRIM42	Q8IWZ5	723 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	AGBL3	Q8NEM8	1001 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	UTP4	Q969X6	686 aa	Known RBP	5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	SUCLG2	Q96I99	432 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	NSUN5	Q96P11	429 aa	Known RBP	5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	EYA3	Q99504	573 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	USP44	Q9H0E7	712 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	EPHX3	Q9H6B9	360 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	RCAN3	Q9UKA8	241 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	USP20	Q9Y2K6	914 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	COL4A1	P02462	1669 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994		A0A1B0GUL6	1792 aa		5.78	□□□□□ -1.48
ATXN3-231	ENST00000554994	KIF16B	Q96L93	1317 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	HMX2	A2RU54	273 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	WNT10B	O00744	389 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	NRL	P54845	237 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	PRMT2	P55345	433 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	JAG1	P78504	1218 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	PRKCZ	Q05513	592 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	ATF7IP	Q6VMQ6	1270 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994		Q6ZS46	218 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	ACAD11	Q709F0	780 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	ARMC10	Q8N2F6	343 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	STAG2	Q8N3U4	1231 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	OPTN	Q96CV9	577 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	ASB2	Q96Q27	587 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	GML	Q99445	158 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	HINFP	Q9BQA5	517 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	ANKRD2	Q9GZV1	360 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	SIL1	Q9H173	461 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	BICC1	Q9H694	974 aa	Known RBP	5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	C7orf69	Q9H7B7	122 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	CPA4	Q9UI42	421 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	MINPP1	Q9UNW1	487 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	HDAC5	Q9UQL6	1122 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	LRRFIP2	Q9Y608	721 aa	Known RBP	5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	LRRC37A	A6NMS7	1700 aa		5.77	□□□□□ -1.49
ATXN3-231	ENST00000554994	LAMB1	P07942	1786 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	TLR2	O60603	784 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	FRAT2	O75474	233 aa	Predicted RBP	5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	WISP1	O95388	367 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	CSF1R	P07333	972 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	GNAI3	P08754	354 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	TRIM27	P14373	513 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	ATP2B4	P23634	1241 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	CASP7	P55210	303 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	CHRND	Q07001	517 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	TMEM31	Q5JXX7	168 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	DTX1	Q86Y01	620 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	PLEKHM2	Q8IWE5	1019 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	TMEM57	Q8N5G2	664 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	KLHDC4	Q8TBB5	520 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	TBC1D16	Q8TBP0	767 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	PANK1	Q8TE04	598 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	ARHGAP45	Q92619	1136 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	PLA2G12B	Q9BX93	195 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	CEP41	Q9BYV8	373 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	PUS3	Q9BZE2	481 aa	Known RBP	5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	RBSN	Q9H1K0	784 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	BSDC1	Q9NW68	430 aa	Predicted RBP	5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	ADGRE2	Q9UHX3	823 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	GABRQ	Q9UN88	632 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	TRIM33	Q9UPN9	1127 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	COG6	Q9Y2V7	657 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	MYO5A	Q9Y4I1	1855 aa	Known RBP	5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	PSME4	Q14997	1843 aa		5.76	□□□□□ -1.49
ATXN3-231	ENST00000554994	XDH	P47989	1333 aa		5.75	□□□□□ -1.49
ATXN3-231	ENST00000554994	LINC01387	J3KSC0	135 aa		5.75	□□□□□ -1.49
ATXN3-231	ENST00000554994	SNAP23	O00161	211 aa		5.75	□□□□□ -1.49
ATXN3-231	ENST00000554994	GNAI2	P04899	355 aa		5.75	□□□□□ -1.49
ATXN3-231	ENST00000554994	PSAP	P07602	524 aa		5.75	□□□□□ -1.49
ATXN3-231	ENST00000554994	CDC25B	P30305	580 aa		5.75	□□□□□ -1.49

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