RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 MEIS2O14770 477 aa16.4■□□□□ 0.22
SHOX2-206ENST00000554685 YEATS4O95619 227 aa16.4■□□□□ 0.22
SHOX2-206ENST00000554685 CFBP00751 764 aa16.4■□□□□ 0.22
SHOX2-206ENST00000554685 UBE2SQ16763 222 aa16.4■□□□□ 0.22
SHOX2-206ENST00000554685 JAKMIP3Q5VZ66 844 aa16.4■□□□□ 0.22
SHOX2-206ENST00000554685 FAM173BQ6P4H8 233 aa16.4■□□□□ 0.22
SHOX2-206ENST00000554685 FAM43AQ8N2R8 423 aa16.4■□□□□ 0.22
SHOX2-206ENST00000554685 RASGRP4Q8TDF6 673 aa16.4■□□□□ 0.22
SHOX2-206ENST00000554685 CLEC4DQ8WXI8 215 aa16.4■□□□□ 0.22
SHOX2-206ENST00000554685 PAGR1Q9BTK6 254 aa16.4■□□□□ 0.22
SHOX2-206ENST00000554685 HOMER2Q9NSB8 354 aa16.4■□□□□ 0.22
SHOX2-206ENST00000554685 POLR3EQ9NVU0 708 aa16.4■□□□□ 0.22
SHOX2-206ENST00000554685 BTBD7Q9P203 1132 aa16.4■□□□□ 0.22
SHOX2-206ENST00000554685 OPLAHO14841 1288 aa16.39■□□□□ 0.21
SHOX2-206ENST00000554685 HSD17B4P51659 736 aa16.39■□□□□ 0.21
SHOX2-206ENST00000554685 ORC2Q13416 577 aaPredicted RBP16.39■□□□□ 0.21
SHOX2-206ENST00000554685 ANO1Q5XXA6 986 aa16.39■□□□□ 0.21
SHOX2-206ENST00000554685 USP17L6PQ6QN14 398 aa16.39■□□□□ 0.21
SHOX2-206ENST00000554685 NEK8Q86SG6 692 aa16.39■□□□□ 0.21
SHOX2-206ENST00000554685 SHCBP1Q8NEM2 672 aa16.39■□□□□ 0.21
SHOX2-206ENST00000554685 PTPN18Q99952 460 aa16.39■□□□□ 0.21
SHOX2-206ENST00000554685 RTEL1Q9NZ71 1219 aa16.39■□□□□ 0.21
SHOX2-206ENST00000554685 FIBPO43427 364 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 ALDH1A1P00352 501 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 CYP2C8P10632 490 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 TM4SF4P48230 202 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 NASPP49321 788 aaPredicted RBP16.38■□□□□ 0.21
SHOX2-206ENST00000554685 ERVK-9P63128 1117 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 ERVK-24P63145 666 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 TTC38Q5R3I4 469 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 CYP4F22Q6NT55 531 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 RNF207Q6ZRF8 634 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 IFNL1Q8IU54 200 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 GPRC5AQ8NFJ5 357 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 CAPNS2Q96L46 248 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 SPATA32Q96LK8 384 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 USP28Q96RU2 1077 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 ANO3Q9BYT9 981 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 MROH8Q9H579 483 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 TMEM260Q9NX78 707 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 RBPJLQ9UBG7 517 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 MORF4L1Q9UBU8 362 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 CNPY2Q9Y2B0 182 aa16.38■□□□□ 0.21
SHOX2-206ENST00000554685 NFIBO00712 420 aa16.37■□□□□ 0.21
SHOX2-206ENST00000554685 CNMDO75829 334 aa16.37■□□□□ 0.21
SHOX2-206ENST00000554685 GCFC2P16383 781 aaKnown RBP16.37■□□□□ 0.21
SHOX2-206ENST00000554685 TAL1P17542 331 aaPredicted RBP16.37■□□□□ 0.21
SHOX2-206ENST00000554685 MCM4P33991 863 aa16.37■□□□□ 0.21
SHOX2-206ENST00000554685 STK38Q15208 465 aa16.37■□□□□ 0.21
SHOX2-206ENST00000554685 TAF1CQ15572 869 aaPredicted RBP16.37■□□□□ 0.21
SHOX2-206ENST00000554685 INF2Q27J81 1249 aa16.37■□□□□ 0.21
SHOX2-206ENST00000554685 MUM1L1Q5H9M0 696 aa16.37■□□□□ 0.21
SHOX2-206ENST00000554685 EARS2Q5JPH6 523 aaKnown RBP16.37■□□□□ 0.21
SHOX2-206ENST00000554685 NSMFQ6X4W1 530 aa16.37■□□□□ 0.21
SHOX2-206ENST00000554685 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.37■□□□□ 0.21
SHOX2-206ENST00000554685 NCAPG2Q86XI2 1143 aa16.37■□□□□ 0.21
SHOX2-206ENST00000554685 JMYQ8N9B5 988 aa16.37■□□□□ 0.21
SHOX2-206ENST00000554685 TMEM87AQ8NBN3 555 aa16.37■□□□□ 0.21
SHOX2-206ENST00000554685 KCNG4Q8TDN1 519 aa16.37■□□□□ 0.21
SHOX2-206ENST00000554685 TBCKQ8TEA7 893 aa16.37■□□□□ 0.21
SHOX2-206ENST00000554685 MOV10L1Q9BXT6 1211 aaKnown RBP16.37■□□□□ 0.21
SHOX2-206ENST00000554685 TFIP11Q9UBB9 837 aaKnown RBP16.37■□□□□ 0.21
SHOX2-206ENST00000554685 RIPK3Q9Y572 518 aa16.37■□□□□ 0.21
SHOX2-206ENST00000554685 MORC2Q9Y6X9 1032 aaPredicted RBP16.37■□□□□ 0.21
SHOX2-206ENST00000554685 PFASO15067 1338 aa16.37■□□□□ 0.21
SHOX2-206ENST00000554685 ELP1O95163 1332 aa16.37■□□□□ 0.21
SHOX2-206ENST00000554685 FAM205CA6NFA0 338 aa16.36■□□□□ 0.21
SHOX2-206ENST00000554685 IGF2BP3O00425 579 aaKnown RBP eCLIP16.36■□□□□ 0.21
SHOX2-206ENST00000554685 ADAMTS3O15072 1205 aa16.36■□□□□ 0.21
SHOX2-206ENST00000554685 HOXA13P31271 388 aaPredicted RBP16.36■□□□□ 0.21
SHOX2-206ENST00000554685 SREBF1P36956 1147 aa16.36■□□□□ 0.21
SHOX2-206ENST00000554685 TOB1P50616 345 aaPredicted RBP16.36■□□□□ 0.21
SHOX2-206ENST00000554685 USP11P51784 963 aa16.36■□□□□ 0.21
SHOX2-206ENST00000554685 GRM1Q13255 1194 aa16.36■□□□□ 0.21
SHOX2-206ENST00000554685 SF3A1Q15459 793 aaKnown RBP16.36■□□□□ 0.21
SHOX2-206ENST00000554685 FAM110CQ1W6H9 321 aa16.36■□□□□ 0.21
SHOX2-206ENST00000554685 FCHSD1Q86WN1 690 aa16.36■□□□□ 0.21
SHOX2-206ENST00000554685 CCAR1Q8IX12 1150 aaKnown RBP16.36■□□□□ 0.21
SHOX2-206ENST00000554685 LEO1Q8WVC0 666 aaPredicted RBP16.36■□□□□ 0.21
SHOX2-206ENST00000554685 ZFYVE28Q9HCC9 887 aa16.36■□□□□ 0.21
SHOX2-206ENST00000554685 RCOR1Q9UKL0 485 aa16.36■□□□□ 0.21
SHOX2-206ENST00000554685 ATP2B1P20020 1258 aa16.35■□□□□ 0.21
SHOX2-206ENST00000554685 RPS6P62753 249 aaKnown RBP16.35■□□□□ 0.21
SHOX2-206ENST00000554685 LETM2Q2VYF4 491 aa16.35■□□□□ 0.21
SHOX2-206ENST00000554685 NOM1Q5C9Z4 860 aaKnown RBP16.35■□□□□ 0.21
SHOX2-206ENST00000554685 POTEEQ6S8J3 1075 aa16.35■□□□□ 0.21
SHOX2-206ENST00000554685 MOXD1Q6UVY6 613 aa16.35■□□□□ 0.21
SHOX2-206ENST00000554685 ANKRD13CQ8N6S4 541 aa16.35■□□□□ 0.21
SHOX2-206ENST00000554685 LINC00301Q8NCQ3 95 aa16.35■□□□□ 0.21
SHOX2-206ENST00000554685 SYTL5Q8TDW5 730 aaPredicted RBP16.35■□□□□ 0.21
SHOX2-206ENST00000554685 TXNRD2Q9NNW7 524 aa16.35■□□□□ 0.21
SHOX2-206ENST00000554685 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.35■□□□□ 0.21
SHOX2-206ENST00000554685 CLIC4Q9Y696 253 aa16.35■□□□□ 0.21
SHOX2-206ENST00000554685 COL11A1P12107 1806 aaPredicted RBP16.35■□□□□ 0.21
SHOX2-206ENST00000554685 MYH15Q9Y2K3 1946 aa16.35■□□□□ 0.21
SHOX2-206ENST00000554685 RBBP6Q7Z6E9 1792 aaKnown RBP16.34■□□□□ 0.21
SHOX2-206ENST00000554685 LAD1O00515 517 aa16.34■□□□□ 0.21
SHOX2-206ENST00000554685 SPTLC2O15270 562 aa16.34■□□□□ 0.21
SHOX2-206ENST00000554685 PPP6R2O75170 966 aa16.34■□□□□ 0.21
SHOX2-206ENST00000554685 ERCC3P19447 782 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms