RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 CCDC171Q6TFL3 1326 aa14.41□□□□□ -0.1
MTHFD1-207ENST00000554677 SPTBN5Q9NRC6 3674 aaKnown RBP14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 RBM47A0AV96 593 aaKnown RBP14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 GRXCR1A8MXD5 290 aa14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 CABYRO75952 493 aa14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 IGHDP01880 384 aa14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 ATXN8OSP0DMR3 200 aa14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 ACRP10323 421 aa14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 SDSP20132 328 aa14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 DNAJB2P25686 324 aa14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 ALDH5A1P51649 535 aaPredicted RBP14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 AKNAD1Q5T1N1 836 aa14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 KIAA1211Q6ZU35 1233 aa14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 ZNF365Q70YC5 407 aa14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 TET1Q8NFU7 2136 aa14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 MAFAQ8NHW3 353 aaPredicted RBP14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 VWCEQ96DN2 955 aa14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 AP5M1Q9H0R1 490 aa14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 SCN5AQ14524 2016 aa14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 UMODL1Q5DID0 1318 aa14.4□□□□□ -0.1
MTHFD1-207ENST00000554677 TRIM6-TRIM34B2RNG4 842 aa14.39□□□□□ -0.11
MTHFD1-207ENST00000554677 TLR3O15455 904 aaKnown RBP14.39□□□□□ -0.11
MTHFD1-207ENST00000554677 PBX2P40425 430 aa14.39□□□□□ -0.11
MTHFD1-207ENST00000554677 ZNF543Q08ER8 600 aa14.39□□□□□ -0.11
MTHFD1-207ENST00000554677 DUSP28Q4G0W2 176 aa14.39□□□□□ -0.11
MTHFD1-207ENST00000554677 MFSD6Q6ZSS7 791 aa14.39□□□□□ -0.11
MTHFD1-207ENST00000554677 TMEM199Q8N511 208 aa14.39□□□□□ -0.11
MTHFD1-207ENST00000554677 RILPL2Q969X0 211 aa14.39□□□□□ -0.11
MTHFD1-207ENST00000554677 TRPV6Q9H1D0 765 aa14.39□□□□□ -0.11
MTHFD1-207ENST00000554677 OSBPL3Q9H4L5 887 aa14.39□□□□□ -0.11
MTHFD1-207ENST00000554677 BAZ2BQ9UIF8 2168 aaKnown RBP14.39□□□□□ -0.11
MTHFD1-207ENST00000554677 LAMA4Q16363 1823 aa14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 REV3LO60673 3130 aa14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 LOC102724159A0A0B4J2E5 919 aa14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 B4GALT4O60513 344 aa14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 PCP11498 1178 aaKnown RBP14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 PSMC6P62333 389 aa14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 PWP2Q15269 919 aaKnown RBP14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 B4GALNT3Q6L9W6 998 aa14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 SLC30A10Q6XR72 485 aa14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 PBX4Q9BYU1 374 aa14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 WDR11Q9BZH6 1224 aa14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 ZNF576Q9H609 170 aa14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 IL23AQ9NPF7 189 aa14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 CXXC1Q9P0U4 656 aaPredicted RBP14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 MYH7BA7E2Y1 1941 aa14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 KIAA1217Q5T5P2 1943 aa14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 NEDD4P46934 1319 aa14.38□□□□□ -0.11
MTHFD1-207ENST00000554677 NCOR1O75376 2440 aa14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 PTPDC1A2A3K4 754 aa14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 ZEB2O60315 1214 aa14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 FOSL2P15408 326 aa14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 EDNRBP24530 442 aa14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 RPS6P62753 249 aaKnown RBP14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 NUCB1Q02818 461 aa14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 AAMPQ13685 434 aa14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 CHD1LQ86WJ1 897 aa14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 HERVK_113Q902F9 699 aa14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 TIFAQ96CG3 184 aa14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 ZKSCAN3Q9BRR0 538 aa14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 NOC4LQ9BVI4 516 aaKnown RBP14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 WNT8AQ9H1J5 351 aa14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 CPVLQ9H3G5 476 aa14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 HIPK3Q9H422 1215 aa14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 ADD3Q9UEY8 706 aaKnown RBP14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 WDR19Q8NEZ3 1342 aa14.37□□□□□ -0.11
MTHFD1-207ENST00000554677 GOLGA8HP0CJ92 632 aa14.36□□□□□ -0.11
MTHFD1-207ENST00000554677 CALML3P27482 149 aa14.36□□□□□ -0.11
MTHFD1-207ENST00000554677 CCL23P55773 120 aa14.36□□□□□ -0.11
MTHFD1-207ENST00000554677 RNF207Q6ZRF8 634 aa14.36□□□□□ -0.11
MTHFD1-207ENST00000554677 DGKHQ86XP1 1220 aa14.36□□□□□ -0.11
MTHFD1-207ENST00000554677 TBC1D5Q92609 795 aa14.36□□□□□ -0.11
MTHFD1-207ENST00000554677 ANKS1AQ92625 1134 aa14.36□□□□□ -0.11
MTHFD1-207ENST00000554677 SEZ6LQ9BYH1 1024 aa14.36□□□□□ -0.11
MTHFD1-207ENST00000554677 UBA5Q9GZZ9 404 aa14.36□□□□□ -0.11
MTHFD1-207ENST00000554677 ALDH8A1Q9H2A2 487 aaPredicted RBP14.36□□□□□ -0.11
MTHFD1-207ENST00000554677 RWDD1Q9H446 243 aaPredicted RBP14.36□□□□□ -0.11
MTHFD1-207ENST00000554677 FGBP02675 491 aa14.35□□□□□ -0.11
MTHFD1-207ENST00000554677 PURAQ00577 322 aaKnown RBP14.35□□□□□ -0.11
MTHFD1-207ENST00000554677 PSRC1Q6PGN9 363 aaPredicted RBP14.35□□□□□ -0.11
MTHFD1-207ENST00000554677 CWC27Q6UX04 472 aaKnown RBP14.35□□□□□ -0.11
MTHFD1-207ENST00000554677 USP38Q8NB14 1042 aa14.35□□□□□ -0.11
MTHFD1-207ENST00000554677 RGS22Q8NE09 1264 aa14.35□□□□□ -0.11
MTHFD1-207ENST00000554677 ESR2Q92731 530 aa14.35□□□□□ -0.11
MTHFD1-207ENST00000554677 COPS5Q92905 334 aa14.35□□□□□ -0.11
MTHFD1-207ENST00000554677 RNF41Q9H4P4 317 aaPredicted RBP14.35□□□□□ -0.11
MTHFD1-207ENST00000554677 ZNF213O14771 459 aa14.34□□□□□ -0.11
MTHFD1-207ENST00000554677 KDM4AO75164 1064 aa14.34□□□□□ -0.11
MTHFD1-207ENST00000554677 MFAP1P55081 439 aaKnown RBP14.34□□□□□ -0.11
MTHFD1-207ENST00000554677 GPATCH4Q5T3I0 446 aaKnown RBP14.34□□□□□ -0.11
MTHFD1-207ENST00000554677 DNERQ8NFT8 737 aa14.34□□□□□ -0.11
MTHFD1-207ENST00000554677 EXOC6Q8TAG9 804 aa14.34□□□□□ -0.11
MTHFD1-207ENST00000554677 TRMT13Q9NUP7 481 aaKnown RBP14.34□□□□□ -0.11
MTHFD1-207ENST00000554677 ZSWIM5Q9P217 1185 aa14.34□□□□□ -0.11
MTHFD1-207ENST00000554677 PNMA2Q9UL42 364 aa14.34□□□□□ -0.11
MTHFD1-207ENST00000554677 MUC3AQ02505 3323 aa14.34□□□□□ -0.11
MTHFD1-207ENST00000554677 TRANK1O15050 2925 aa14.34□□□□□ -0.11
MTHFD1-207ENST00000554677 ARIH2O95376 493 aa14.33□□□□□ -0.12
MTHFD1-207ENST00000554677 CYP2C9P11712 490 aa14.33□□□□□ -0.12
MTHFD1-207ENST00000554677 OTOP2Q7RTS6 562 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms