RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 FBXO24O75426 580 aa6.49□□□□□ -1.37
ATXN3-228ENST00000554592 HMOX1P09601 288 aa6.49□□□□□ -1.37
ATXN3-228ENST00000554592 SPINK2P20155 84 aa6.49□□□□□ -1.37
ATXN3-228ENST00000554592 HOXA10P31260 410 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-228ENST00000554592 ZNF76P36508 570 aa6.49□□□□□ -1.37
ATXN3-228ENST00000554592 EPS15P42566 896 aa6.49□□□□□ -1.37
ATXN3-228ENST00000554592 ID3Q02535 119 aa6.49□□□□□ -1.37
ATXN3-228ENST00000554592 RAD51AP2Q09MP3 1159 aa6.49□□□□□ -1.37
ATXN3-228ENST00000554592 TEFQ10587 303 aa6.49□□□□□ -1.37
ATXN3-228ENST00000554592 OLFM4Q6UX06 510 aa6.49□□□□□ -1.37
ATXN3-228ENST00000554592 SAPCD2Q86UD0 394 aa6.49□□□□□ -1.37
ATXN3-228ENST00000554592 NT5DC4Q86YG4 428 aa6.49□□□□□ -1.37
ATXN3-228ENST00000554592 GRIN3AQ8TCU5 1115 aa6.49□□□□□ -1.37
ATXN3-228ENST00000554592 GNAT3A8MTJ3 354 aa6.48□□□□□ -1.37
ATXN3-228ENST00000554592 CELF2O95319 508 aaKnown RBP6.48□□□□□ -1.37
ATXN3-228ENST00000554592 SLFN14P0C7P3 912 aa6.48□□□□□ -1.37
ATXN3-228ENST00000554592 RAB6AP20340 208 aa6.48□□□□□ -1.37
ATXN3-228ENST00000554592 ERCC5P28715 1186 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-228ENST00000554592 ST13P50502 369 aaKnown RBP6.48□□□□□ -1.37
ATXN3-228ENST00000554592 ZC3H12AQ5D1E8 599 aaKnown RBP6.48□□□□□ -1.37
ATXN3-228ENST00000554592 DTX1Q86Y01 620 aa6.48□□□□□ -1.37
ATXN3-228ENST00000554592 KRTAP1-3Q8IUG1 177 aa6.48□□□□□ -1.37
ATXN3-228ENST00000554592 FBXL6Q8N531 539 aa6.48□□□□□ -1.37
ATXN3-228ENST00000554592 IL17REQ8NFR9 667 aa6.48□□□□□ -1.37
ATXN3-228ENST00000554592 GPBAR1Q8TDU6 330 aa6.48□□□□□ -1.37
ATXN3-228ENST00000554592 KCNB2Q92953 911 aa6.48□□□□□ -1.37
ATXN3-228ENST00000554592 YIPF2Q9BWQ6 316 aa6.48□□□□□ -1.37
ATXN3-228ENST00000554592 EMILIN2Q9BXX0 1053 aa6.48□□□□□ -1.37
ATXN3-228ENST00000554592 CEP44Q9C0F1 390 aa6.48□□□□□ -1.37
ATXN3-228ENST00000554592 ADARB2Q9NS39 739 aaKnown RBP6.48□□□□□ -1.37
ATXN3-228ENST00000554592 NIP7Q9Y221 180 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATXN3-228ENST00000554592 KNSTRNQ9Y448 316 aa6.48□□□□□ -1.37
ATXN3-228ENST00000554592 ADAMTS7Q9UKP4 1686 aa6.48□□□□□ -1.37
ATXN3-228ENST00000554592 NRXN2Q9P2S2 1712 aa6.47□□□□□ -1.37
ATXN3-228ENST00000554592 DIAPH1O60610 1272 aaKnown RBP6.47□□□□□ -1.37
ATXN3-228ENST00000554592 CELA3AP09093 270 aa6.47□□□□□ -1.37
ATXN3-228ENST00000554592 NOGQ13253 232 aa6.47□□□□□ -1.37
ATXN3-228ENST00000554592 MAP7Q14244 749 aa6.47□□□□□ -1.37
ATXN3-228ENST00000554592 CIAPIN1Q6FI81 312 aa6.47□□□□□ -1.37
ATXN3-228ENST00000554592 TBC1D32Q96NH3 1257 aa6.47□□□□□ -1.37
ATXN3-228ENST00000554592 VPS33BQ9H267 617 aa6.47□□□□□ -1.37
ATXN3-228ENST00000554592 PGAP2Q9UHJ9 254 aa6.47□□□□□ -1.37
ATXN3-228ENST00000554592 USP16Q9Y5T5 823 aa6.47□□□□□ -1.37
ATXN3-228ENST00000554592 FAM170BA6NMN3 283 aa6.46□□□□□ -1.38
ATXN3-228ENST00000554592 BTBD11A6QL63 1104 aa6.46□□□□□ -1.38
ATXN3-228ENST00000554592 NEFMP07197 916 aa6.46□□□□□ -1.38
ATXN3-228ENST00000554592 SNRPA1P09661 255 aaKnown RBP6.46□□□□□ -1.38
ATXN3-228ENST00000554592 RING1Q06587 406 aa6.46□□□□□ -1.38
ATXN3-228ENST00000554592 TJP1Q07157 1748 aa6.46□□□□□ -1.38
ATXN3-228ENST00000554592 CPSF6Q16630 551 aaKnown RBP eCLIP6.46□□□□□ -1.38
ATXN3-228ENST00000554592 MSMPQ1L6U9 139 aa6.46□□□□□ -1.38
ATXN3-228ENST00000554592 CRY2Q49AN0 593 aa6.46□□□□□ -1.38
ATXN3-228ENST00000554592 CDC37L1Q7L3B6 337 aa6.46□□□□□ -1.38
ATXN3-228ENST00000554592 NIM1KQ8IY84 436 aa6.46□□□□□ -1.38
ATXN3-228ENST00000554592 TMX4Q9H1E5 349 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-228ENST00000554592 ATXN3LQ9H3M9 355 aa6.46□□□□□ -1.38
ATXN3-228ENST00000554592 PCMTD2Q9NV79 361 aa6.46□□□□□ -1.38
ATXN3-228ENST00000554592 GPRC5DQ9NZD1 345 aa6.46□□□□□ -1.38
ATXN3-228ENST00000554592 TTF2Q9UNY4 1162 aaKnown RBP6.46□□□□□ -1.38
ATXN3-228ENST00000554592 ANKRD26Q9UPS8 1709 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 KCNQ3O43525 872 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 FOSL1P15407 271 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 NTF4P34130 210 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 SOX10P56693 466 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 ERVK-24P63145 666 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 TTLL4Q14679 1199 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 ZNF394Q53GI3 561 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 SCARA3Q6AZY7 606 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 SV2BQ7L1I2 683 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 RPGRQ92834 1020 aaKnown RBP6.45□□□□□ -1.38
ATXN3-228ENST00000554592 RBM17Q96I25 401 aaKnown RBP6.45□□□□□ -1.38
ATXN3-228ENST00000554592 CRAMP1Q96RY5 1269 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 GLIS2Q9BZE0 524 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-228ENST00000554592 NYXQ9GZU5 481 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 SAGE1Q9NXZ1 904 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 GGT7Q9UJ14 662 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 ZNRF3Q9ULT6 936 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 DAGLAQ9Y4D2 1042 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 MRC1P22897 1456 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 SCN4AP35499 1836 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 KIF20BQ96Q89 1820 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 TIAM2Q8IVF5 1701 aa6.45□□□□□ -1.38
ATXN3-228ENST00000554592 PPIP5K2O43314 1243 aa6.44□□□□□ -1.38
ATXN3-228ENST00000554592 GRIK1P39086 918 aa6.44□□□□□ -1.38
ATXN3-228ENST00000554592 PIP4K2AP48426 406 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-228ENST00000554592 HUNKP57058 714 aa6.44□□□□□ -1.38
ATXN3-228ENST00000554592 PTPN11Q06124 597 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-228ENST00000554592 CXCL9Q07325 125 aa6.44□□□□□ -1.38
ATXN3-228ENST00000554592 CCDC85BQ15834 202 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-228ENST00000554592 HLFQ16534 295 aa6.44□□□□□ -1.38
ATXN3-228ENST00000554592 PCNX4Q63HM2 1172 aa6.44□□□□□ -1.38
ATXN3-228ENST00000554592 OGFOD3Q6PK18 319 aa6.44□□□□□ -1.38
ATXN3-228ENST00000554592 HS2ST1Q7LGA3 356 aa6.44□□□□□ -1.38
ATXN3-228ENST00000554592 ERMP1Q7Z2K6 904 aa6.44□□□□□ -1.38
ATXN3-228ENST00000554592 SMYD4Q8IYR2 804 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-228ENST00000554592 SUPT20HQ8NEM7 779 aa6.44□□□□□ -1.38
ATXN3-228ENST00000554592 NOC4LQ9BVI4 516 aaKnown RBP6.44□□□□□ -1.38
ATXN3-228ENST00000554592 OSBPL1AQ9BXW6 950 aa6.44□□□□□ -1.38
ATXN3-228ENST00000554592 TGIF2Q9GZN2 237 aa6.44□□□□□ -1.38
ATXN3-228ENST00000554592 ZNF408Q9H9D4 720 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms