RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 CREBRFQ8IUR6 639 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 PIM2Q9P1W9 311 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 ZBTB5O15062 677 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 CDC25BP30305 580 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 NAALADL2Q58DX5 795 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 LRRC8AQ8IWT6 810 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 ZNF397Q8NF99 534 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-212ENST00000554467 GMLQ99445 158 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 PSMD1Q99460 953 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 MYO3BQ8WXR4 1341 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 TXLNAP40222 546 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 CDC37Q16543 378 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-212ENST00000554467 KIAA1755Q5JYT7 1200 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 GPATCH4Q5T3I0 446 aaKnown RBP13.17□□□□□ -0.3
SHMT2-212ENST00000554467 TMEM179Q6ZVK1 233 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 SPATA20Q8TB22 786 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 DISC1Q9NRI5 854 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 BCS1LQ9Y276 419 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 PAXBP1Q9Y5B6 917 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 PCDHA1Q9Y5I3 950 aa13.17□□□□□ -0.3
SHMT2-212ENST00000554467 PSDA5PKW4 1024 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-212ENST00000554467 SKILP12757 684 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 RRAGBQ5VZM2 374 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 PSTPIP2Q9H939 334 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 ZNRF3Q9ULT6 936 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 GDAQ9Y2T3 454 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 SMCHD1A6NHR9 2005 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 POTEMA6NI47 508 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 SMARCA1P28370 1054 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 RAD51AP2Q09MP3 1159 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 MLKLQ8NB16 471 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 CTNND2Q9UQB3 1225 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 ENTPD3O75355 529 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 PLCG1P19174 1290 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 ELF2Q15723 593 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 EEF2KMTQ96G04 330 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 NYAP2Q9P242 653 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 HDAC9Q9UKV0 1011 aa13.16□□□□□ -0.3
SHMT2-212ENST00000554467 IRX3P78415 501 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-212ENST00000554467 DALRD3Q5D0E6 543 aaKnown RBP13.15□□□□□ -0.3
SHMT2-212ENST00000554467 INTS13Q9NVM9 706 aa13.15□□□□□ -0.3
SHMT2-212ENST00000554467 CNTNAP1P78357 1384 aa13.15□□□□□ -0.3
SHMT2-212ENST00000554467 ASTN2O75129 1339 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-212ENST00000554467 CALCRLQ16602 461 aa13.15□□□□□ -0.3
SHMT2-212ENST00000554467 CABP7Q86V35 215 aa13.15□□□□□ -0.3
SHMT2-212ENST00000554467 CUL5Q93034 780 aa13.15□□□□□ -0.3
SHMT2-212ENST00000554467 GLIS2Q9BZE0 524 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-212ENST00000554467 RASSF7Q02833 373 aa13.14□□□□□ -0.31
SHMT2-212ENST00000554467 ARMCX5Q6P1M9 558 aa13.14□□□□□ -0.31
SHMT2-212ENST00000554467 ELOA2Q8IYF1 753 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-212ENST00000554467 FBXO41Q8TF61 875 aa13.14□□□□□ -0.31
SHMT2-212ENST00000554467 CCDC34Q96HJ3 373 aa13.14□□□□□ -0.31
SHMT2-212ENST00000554467 RIC8AQ9NPQ8 531 aa13.14□□□□□ -0.31
SHMT2-212ENST00000554467 PPP1R3GB7ZBB8 358 aa13.14□□□□□ -0.31
SHMT2-212ENST00000554467 CEP135Q66GS9 1140 aa13.14□□□□□ -0.31
SHMT2-212ENST00000554467 HPS3Q969F9 1004 aa13.14□□□□□ -0.31
SHMT2-212ENST00000554467 MKL1Q969V6 931 aa13.14□□□□□ -0.31
SHMT2-212ENST00000554467 P2RX7Q99572 595 aaKnown RBP13.14□□□□□ -0.31
SHMT2-212ENST00000554467 GREB1LQ9C091 1923 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-212ENST00000554467 ESYT2A0FGR8 921 aa13.14□□□□□ -0.31
SHMT2-212ENST00000554467 RPN1P04843 607 aaKnown RBP13.14□□□□□ -0.31
SHMT2-212ENST00000554467 HOXA13P31271 388 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-212ENST00000554467 SLC16A10Q8TF71 515 aa13.14□□□□□ -0.31
SHMT2-212ENST00000554467 NUDT12Q9BQG2 462 aa13.14□□□□□ -0.31
SHMT2-212ENST00000554467 TAOK3Q9H2K8 898 aa13.14□□□□□ -0.31
SHMT2-212ENST00000554467 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-212ENST00000554467 GJA3Q9Y6H8 435 aa13.14□□□□□ -0.31
SHMT2-212ENST00000554467 SYNRGQ9UMZ2 1314 aa13.14□□□□□ -0.31
SHMT2-212ENST00000554467 ATRNL1Q5VV63 1379 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 WNT10BO00744 389 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 SPDYE2Q495Y8 402 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 FHOD1Q9Y613 1164 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 NFKBIEO00221 500 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 GTPBP6O43824 516 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-212ENST00000554467 POLD1P28340 1107 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 DGKZQ13574 1117 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 FAM83BQ5T0W9 1011 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 LRRN4CLQ8ND94 238 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 DCAF4Q8WV16 495 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 JDP2Q8WYK2 163 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 GSDMAQ96QA5 445 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 MMTAG2Q9BU76 263 aaKnown RBP13.13□□□□□ -0.31
SHMT2-212ENST00000554467 MARCH6O60337 910 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 CHRM1P11229 460 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-212ENST00000554467 BMP3P12645 472 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 CCZ1BP86790 482 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 CCZ1P86791 482 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-212ENST00000554467 SAMD7Q7Z3H4 446 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 TRIML1Q8N9V2 468 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 FAM151AQ8WW52 585 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 DACH1Q9UI36 760 aa13.13□□□□□ -0.31
SHMT2-212ENST00000554467 TRIM49BA6NDI0 452 aa13.12□□□□□ -0.31
SHMT2-212ENST00000554467 MRPL12P52815 198 aaKnown RBP13.12□□□□□ -0.31
SHMT2-212ENST00000554467 CCDC174Q6PII3 467 aa13.12□□□□□ -0.31
SHMT2-212ENST00000554467 ENOX1Q8TC92 643 aaKnown RBP13.12□□□□□ -0.31
SHMT2-212ENST00000554467 MTMR8Q96EF0 704 aa13.12□□□□□ -0.31
SHMT2-212ENST00000554467 FZD1Q9UP38 647 aa13.12□□□□□ -0.31
SHMT2-212ENST00000554467 PTPN14Q15678 1187 aa13.12□□□□□ -0.31
SHMT2-212ENST00000554467 SYDE2Q5VT97 1194 aa13.12□□□□□ -0.31
SHMT2-212ENST00000554467 CIAPIN1Q6FI81 312 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms