RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 VAV1P15498 845 aa6.5□□□□□ -1.37
FCF1-204ENST00000553673 GTF2F1P35269 517 aaKnown RBP eCLIP6.5□□□□□ -1.37
FCF1-204ENST00000553673 NR1I3Q14994 352 aa6.5□□□□□ -1.37
FCF1-204ENST00000553673 UBXN11Q5T124 520 aa6.5□□□□□ -1.37
FCF1-204ENST00000553673 ZFYVE27Q5T4F4 411 aa6.5□□□□□ -1.37
FCF1-204ENST00000553673 SOGA3Q5TF21 947 aa6.5□□□□□ -1.37
FCF1-204ENST00000553673 TMEM192Q8IY95 271 aa6.5□□□□□ -1.37
FCF1-204ENST00000553673 TMEM52Q8NDY8 209 aa6.5□□□□□ -1.37
FCF1-204ENST00000553673 GPR20Q99678 358 aa6.5□□□□□ -1.37
FCF1-204ENST00000553673 FBXL21Q9UKT6 434 aa6.5□□□□□ -1.37
FCF1-204ENST00000553673 ZNF214Q9UL59 606 aaPredicted RBP6.5□□□□□ -1.37
FCF1-204ENST00000553673 PCDHB12Q9Y5F1 795 aa6.5□□□□□ -1.37
FCF1-204ENST00000553673 A0A1B0GTL3 188 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 A0A1W2PQ27 194 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 A0A1W2PQ64 194 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 A0A1W2PQC6 194 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 A0A1W2PQD8 194 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 FAM86C2PA6NEL3 165 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 MSL3P1P0C860 447 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 MVKQ03426 396 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 ZYXQ15942 572 aaKnown RBP6.49□□□□□ -1.37
FCF1-204ENST00000553673 VWA3BQ502W6 1294 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 NBPF6Q5VWK0 638 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 ANKS3Q6ZW76 656 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 NBPF4Q96M43 638 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 SPATA25Q9BR10 227 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 USP40Q9NVE5 1235 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 SUSD2Q9UGT4 822 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 PLA2G2DQ9UNK4 145 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 MYRFQ9Y2G1 1151 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 HCFC2Q9Y5Z7 792 aa6.49□□□□□ -1.37
FCF1-204ENST00000553673 PLA2G1BP04054 148 aaKnown RBP6.48□□□□□ -1.37
FCF1-204ENST00000553673 SLC7A5Q01650 507 aa6.48□□□□□ -1.37
FCF1-204ENST00000553673 TARBP2Q15633 366 aaKnown RBP6.48□□□□□ -1.37
FCF1-204ENST00000553673 FXNQ16595 210 aa6.48□□□□□ -1.37
FCF1-204ENST00000553673 GNPTABQ3T906 1256 aa6.48□□□□□ -1.37
FCF1-204ENST00000553673 NT5DC1Q5TFE4 455 aa6.48□□□□□ -1.37
FCF1-204ENST00000553673 LIPIQ6XZB0 460 aa6.48□□□□□ -1.37
FCF1-204ENST00000553673 FERMT3Q86UX7 667 aa6.48□□□□□ -1.37
FCF1-204ENST00000553673 CCDC144CPQ8IYA2 1237 aa6.48□□□□□ -1.37
FCF1-204ENST00000553673 NAT16Q8N8M0 369 aa6.48□□□□□ -1.37
FCF1-204ENST00000553673 FNIP1Q8TF40 1166 aa6.48□□□□□ -1.37
FCF1-204ENST00000553673 LTBP3Q9NS15 1303 aa6.48□□□□□ -1.37
FCF1-204ENST00000553673 U2SURPO15042 1029 aaKnown RBP6.47□□□□□ -1.37
FCF1-204ENST00000553673 DBHP09172 617 aa6.47□□□□□ -1.37
FCF1-204ENST00000553673 FBLN1P23142 703 aa6.47□□□□□ -1.37
FCF1-204ENST00000553673 RBL2Q08999 1139 aa6.47□□□□□ -1.37
FCF1-204ENST00000553673 AUHQ13825 339 aaKnown RBP6.47□□□□□ -1.37
FCF1-204ENST00000553673 NCAPHQ15003 741 aa6.47□□□□□ -1.37
FCF1-204ENST00000553673 RTP2Q5QGT7 225 aa6.47□□□□□ -1.37
FCF1-204ENST00000553673 VHLLQ6RSH7 139 aa6.47□□□□□ -1.37
FCF1-204ENST00000553673 UBXN4Q92575 508 aa6.47□□□□□ -1.37
FCF1-204ENST00000553673 TRIM55Q9BYV6 548 aa6.47□□□□□ -1.37
FCF1-204ENST00000553673 CNOT11Q9UKZ1 510 aaKnown RBP6.47□□□□□ -1.37
FCF1-204ENST00000553673 PALD1Q9ULE6 856 aa6.47□□□□□ -1.37
FCF1-204ENST00000553673 PMF1-BGLAPU3KQ54 211 aa6.47□□□□□ -1.37
FCF1-204ENST00000553673 FOXO4P98177 505 aa6.46□□□□□ -1.38
FCF1-204ENST00000553673 ZNF827Q17R98 1081 aa6.46□□□□□ -1.38
FCF1-204ENST00000553673 ANKRD39Q53RE8 183 aa6.46□□□□□ -1.38
FCF1-204ENST00000553673 LARP1BQ659C4 914 aaKnown RBP6.46□□□□□ -1.38
FCF1-204ENST00000553673 PAQR3Q6TCH7 311 aa6.46□□□□□ -1.38
FCF1-204ENST00000553673 JAMLQ86YT9 394 aa6.46□□□□□ -1.38
FCF1-204ENST00000553673 C7orf61Q8IZ16 206 aa6.46□□□□□ -1.38
FCF1-204ENST00000553673 DSCC1Q9BVC3 393 aa6.46□□□□□ -1.38
FCF1-204ENST00000553673 PRR13Q9NZ81 148 aa6.46□□□□□ -1.38
FCF1-204ENST00000553673 C9IYK1 514 aa6.45□□□□□ -1.38
FCF1-204ENST00000553673 KLF4O43474 513 aa6.45□□□□□ -1.38
FCF1-204ENST00000553673 CYBBP04839 570 aa6.45□□□□□ -1.38
FCF1-204ENST00000553673 GSNP06396 782 aa6.45□□□□□ -1.38
FCF1-204ENST00000553673 GSTM1P09488 218 aa6.45□□□□□ -1.38
FCF1-204ENST00000553673 NAT2P11245 290 aa6.45□□□□□ -1.38
FCF1-204ENST00000553673 ATF2P15336 505 aa6.45□□□□□ -1.38
FCF1-204ENST00000553673 RAB33AQ14088 237 aa6.45□□□□□ -1.38
FCF1-204ENST00000553673 TCEAL1Q15170 157 aa6.45□□□□□ -1.38
FCF1-204ENST00000553673 HLA-DQA1Q5Y7H0 255 aa6.45□□□□□ -1.38
FCF1-204ENST00000553673 ZNF526Q8TF50 670 aaPredicted RBP6.45□□□□□ -1.38
FCF1-204ENST00000553673 HNRNPLLQ8WVV9 542 aaKnown RBP6.45□□□□□ -1.38
FCF1-204ENST00000553673 FAN1Q9Y2M0 1017 aa6.45□□□□□ -1.38
FCF1-204ENST00000553673 A0A1W2PQJ5 194 aa6.44□□□□□ -1.38
FCF1-204ENST00000553673 SRGAP3O43295 1099 aa6.44□□□□□ -1.38
FCF1-204ENST00000553673 DDAH1O94760 285 aa6.44□□□□□ -1.38
FCF1-204ENST00000553673 TP53P04637 393 aaPredicted RBP6.44□□□□□ -1.38
FCF1-204ENST00000553673 HTRA3P83110 453 aa6.44□□□□□ -1.38
FCF1-204ENST00000553673 TDRD10Q5VZ19 366 aaKnown RBP6.44□□□□□ -1.38
FCF1-204ENST00000553673 BICRALQ6AI39 1079 aa6.44□□□□□ -1.38
FCF1-204ENST00000553673 KIAA1211LQ6NV74 962 aa6.44□□□□□ -1.38
FCF1-204ENST00000553673 SAPCD2Q86UD0 394 aa6.44□□□□□ -1.38
FCF1-204ENST00000553673 PPFIBP1Q86W92 1011 aa6.44□□□□□ -1.38
FCF1-204ENST00000553673 SLC12A9Q9BXP2 914 aa6.44□□□□□ -1.38
FCF1-204ENST00000553673 PCDHB10Q9UN67 800 aa6.44□□□□□ -1.38
FCF1-204ENST00000553673 MC3RP41968 323 aa6.43□□□□□ -1.38
FCF1-204ENST00000553673 ZNF143P52747 638 aaPredicted RBP6.43□□□□□ -1.38
FCF1-204ENST00000553673 PRR5P85299 388 aa6.43□□□□□ -1.38
FCF1-204ENST00000553673 AXDND1Q5T1B0 1012 aaPredicted RBP6.43□□□□□ -1.38
FCF1-204ENST00000553673 HEATR6Q6AI08 1181 aaKnown RBP6.43□□□□□ -1.38
FCF1-204ENST00000553673 C6orf15Q6UXA7 325 aaPredicted RBP6.43□□□□□ -1.38
FCF1-204ENST00000553673 FAM178BQ8IXR5 827 aa6.43□□□□□ -1.38
FCF1-204ENST00000553673 DDX1Q92499 740 aaKnown RBP6.43□□□□□ -1.38
FCF1-204ENST00000553673 HAUS7Q99871 368 aa6.43□□□□□ -1.38
FCF1-204ENST00000553673 GBP3Q9H0R5 595 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms