RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 ATP6V1DQ9Y5K8 247 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 FAM205CA6NFA0 338 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 SPDYE3A6NKU9 549 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 ATP2A1O14983 1001 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 ERCC3P19447 782 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 TM4SF4P48230 202 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 CRHR2Q13324 411 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 NPY5RQ15761 445 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 NOM1Q5C9Z4 860 aaKnown RBP11.17□□□□□ -0.62
CHD8-204ENST00000553622 POTEEQ6S8J3 1075 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 RNF207Q6ZRF8 634 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 KRT25Q7Z3Z0 450 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 BRAPQ7Z569 592 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 RIOX2Q8IUF8 465 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 RGS22Q8NE09 1264 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 CLEC4DQ8WXI8 215 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 TBC1D5Q92609 795 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 CHAMP1Q96JM3 812 aa11.17□□□□□ -0.62
CHD8-204ENST00000553622 NOL7Q9UMY1 257 aaKnown RBP11.17□□□□□ -0.62
CHD8-204ENST00000553622 ZSWIM8A7E2V4 1837 aa11.16□□□□□ -0.62
CHD8-204ENST00000553622 OPLAHO14841 1288 aa11.16□□□□□ -0.62
CHD8-204ENST00000553622 SLC25A27O95847 323 aa11.16□□□□□ -0.62
CHD8-204ENST00000553622 ALDH1A1P00352 501 aa11.16□□□□□ -0.62
CHD8-204ENST00000553622 U2AF2P26368 475 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHD8-204ENST00000553622 COPB2P35606 906 aa11.16□□□□□ -0.62
CHD8-204ENST00000553622 C1QTNF8P60827 252 aa11.16□□□□□ -0.62
CHD8-204ENST00000553622 CEBPZQ03701 1054 aaKnown RBP11.16□□□□□ -0.62
CHD8-204ENST00000553622 DNM1Q05193 864 aaKnown RBP11.16□□□□□ -0.62
CHD8-204ENST00000553622 BAATQ14032 418 aaPredicted RBP11.16□□□□□ -0.62
CHD8-204ENST00000553622 NONOQ15233 471 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHD8-204ENST00000553622 INF2Q27J81 1249 aa11.16□□□□□ -0.62
CHD8-204ENST00000553622 Q3C1V9 767 aa11.16□□□□□ -0.62
CHD8-204ENST00000553622 SLC30A10Q6XR72 485 aa11.16□□□□□ -0.62
CHD8-204ENST00000553622 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
CHD8-204ENST00000553622 ANKRD35Q8N283 1001 aa11.16□□□□□ -0.62
CHD8-204ENST00000553622 CHST13Q8NET6 341 aa11.16□□□□□ -0.62
CHD8-204ENST00000553622 ZNF396Q96N95 335 aaPredicted RBP11.16□□□□□ -0.62
CHD8-204ENST00000553622 EHMT1Q9H9B1 1298 aa11.16□□□□□ -0.62
CHD8-204ENST00000553622 FBXO40Q9UH90 709 aa11.16□□□□□ -0.62
CHD8-204ENST00000553622 DOCK5Q9H7D0 1870 aa11.15□□□□□ -0.62
CHD8-204ENST00000553622 MEIS2O14770 477 aa11.15□□□□□ -0.62
CHD8-204ENST00000553622 HSPA6P17066 643 aa11.15□□□□□ -0.62
CHD8-204ENST00000553622 RPS6P62753 249 aaKnown RBP11.15□□□□□ -0.62
CHD8-204ENST00000553622 FAM110CQ1W6H9 321 aa11.15□□□□□ -0.62
CHD8-204ENST00000553622 TPRNQ4KMQ1 711 aa11.15□□□□□ -0.62
CHD8-204ENST00000553622 EARS2Q5JPH6 523 aaKnown RBP11.15□□□□□ -0.62
CHD8-204ENST00000553622 MYSM1Q5VVJ2 828 aa11.15□□□□□ -0.62
CHD8-204ENST00000553622 TNFRSF25Q93038 417 aa11.15□□□□□ -0.62
CHD8-204ENST00000553622 MMP19Q99542 508 aa11.15□□□□□ -0.62
CHD8-204ENST00000553622 ANO3Q9BYT9 981 aa11.15□□□□□ -0.62
CHD8-204ENST00000553622 PORCNQ9H237 461 aa11.15□□□□□ -0.62
CHD8-204ENST00000553622 MROH8Q9H579 483 aa11.15□□□□□ -0.62
CHD8-204ENST00000553622 EFCC1Q9HA90 598 aa11.15□□□□□ -0.62
CHD8-204ENST00000553622 TFIP11Q9UBB9 837 aaKnown RBP11.15□□□□□ -0.62
CHD8-204ENST00000553622 IVNS1ABPQ9Y6Y0 642 aa11.15□□□□□ -0.62
CHD8-204ENST00000553622 THSD7BQ9C0I4 1608 aa11.15□□□□□ -0.62
CHD8-204ENST00000553622 ADGRA2Q96PE1 1338 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 M0R2N6 131 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 PIK3CDO00329 1044 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 FIBPO43427 364 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 CA12O43570 354 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 TLR2O60603 784 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 TBC1D8O95759 1140 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 FOSP01100 380 aaPredicted RBP11.14□□□□□ -0.63
CHD8-204ENST00000553622 MAP2K2P36507 400 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 CLK2P49760 499 aaKnown RBP11.14□□□□□ -0.63
CHD8-204ENST00000553622 HSD17B4P51659 736 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 UBXN2AP68543 259 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 KRT85P78386 507 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 AP3B2Q13367 1082 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 NBR1Q14596 966 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 KCTD2Q14681 263 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 LETM2Q2VYF4 491 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 TTC38Q5R3I4 469 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 TBCKQ8TEA7 893 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 GBP4Q96PP9 640 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 FTOQ9C0B1 505 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHD8-204ENST00000553622 R3HDMLQ9H3Y0 253 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 A1CFQ9NQ94 594 aaKnown RBP11.14□□□□□ -0.63
CHD8-204ENST00000553622 MORF4L1Q9UBU8 362 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 CNPY2Q9Y2B0 182 aa11.14□□□□□ -0.63
CHD8-204ENST00000553622 PFASO15067 1338 aa11.13□□□□□ -0.63
CHD8-204ENST00000553622 TRPA1O75762 1119 aa11.13□□□□□ -0.63
CHD8-204ENST00000553622 BAG4O95429 457 aaKnown RBP11.13□□□□□ -0.63
CHD8-204ENST00000553622 FCER1AP12319 257 aa11.13□□□□□ -0.63
CHD8-204ENST00000553622 EIF2AK2P19525 551 aaKnown RBP11.13□□□□□ -0.63
CHD8-204ENST00000553622 MCM7P33993 719 aa11.13□□□□□ -0.63
CHD8-204ENST00000553622 ZNF76P36508 570 aa11.13□□□□□ -0.63
CHD8-204ENST00000553622 STK38Q15208 465 aa11.13□□□□□ -0.63
CHD8-204ENST00000553622 ZNF174Q15697 407 aa11.13□□□□□ -0.63
CHD8-204ENST00000553622 RILPL1Q5EBL4 403 aa11.13□□□□□ -0.63
CHD8-204ENST00000553622 ARHGEF16Q5VV41 709 aa11.13□□□□□ -0.63
CHD8-204ENST00000553622 MCTP2Q6DN12 878 aa11.13□□□□□ -0.63
CHD8-204ENST00000553622 NEK8Q86SG6 692 aa11.13□□□□□ -0.63
CHD8-204ENST00000553622 SHCBP1Q8NEM2 672 aa11.13□□□□□ -0.63
CHD8-204ENST00000553622 SYTL5Q8TDW5 730 aaPredicted RBP11.13□□□□□ -0.63
CHD8-204ENST00000553622 PURBQ96QR8 312 aaKnown RBP11.13□□□□□ -0.63
CHD8-204ENST00000553622 GDPD2Q9HCC8 539 aa11.13□□□□□ -0.63
CHD8-204ENST00000553622 CYP39A1Q9NYL5 469 aa11.13□□□□□ -0.63
CHD8-204ENST00000553622 COL20A1Q9P218 1284 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms