RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 STRIP1Q5VSL9 837 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 NAA16Q6N069 864 aaPredicted RBP5.96□□□□□ -1.46
VTI1B-202ENST00000553619 DZIP1Q86YF9 867 aaKnown RBP5.96□□□□□ -1.46
VTI1B-202ENST00000553619 NIM1KQ8IY84 436 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 IL22RA1Q8N6P7 574 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 MAGEB6Q8N7X4 407 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 MAP4K1Q92918 833 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 CLP1Q92989 425 aaKnown RBP5.96□□□□□ -1.46
VTI1B-202ENST00000553619 EDC3Q96F86 508 aaKnown RBP5.96□□□□□ -1.46
VTI1B-202ENST00000553619 SPACA7Q96KW9 195 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 NACAP1Q9BZK3 213 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 TRIM33Q9UPN9 1127 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 LRRC37AA6NMS7 1700 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 CCDC171Q6TFL3 1326 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 MYO3BQ8WXR4 1341 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 ZNF532Q9HCE3 1301 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 IRS2Q9Y4H2 1338 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 WTIPA6NIX2 430 aaPredicted RBP5.95□□□□□ -1.46
VTI1B-202ENST00000553619 PATL2C9JE40 543 aaKnown RBP5.95□□□□□ -1.46
VTI1B-202ENST00000553619 TNFRSF10BO14763 440 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 ECE2O60344 883 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 APPP05067 770 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 PDE6AP16499 860 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 PCSK2P16519 638 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 SOX18P35713 384 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 IARSP41252 1262 aaKnown RBP5.95□□□□□ -1.46
VTI1B-202ENST00000553619 HDLBPQ00341 1268 aaKnown RBP5.95□□□□□ -1.46
VTI1B-202ENST00000553619 BECN1Q14457 450 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 KRT32Q14532 448 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 TNIP1Q15025 636 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 AOC3Q16853 763 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 MFSD14BQ5SR56 506 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 PI16Q6UXB8 463 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 PRR23CQ6ZRP0 262 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 CAPN12Q6ZSI9 719 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 FAM227BQ96M60 508 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 TBC1D32Q96NH3 1257 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 TAOK3Q9H2K8 898 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 AKTIPQ9H8T0 292 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 PIH1D3Q9NQM4 214 aaKnown RBP5.95□□□□□ -1.46
VTI1B-202ENST00000553619 HDAC9Q9UKV0 1011 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 LTBP3Q9NS15 1303 aa5.95□□□□□ -1.46
VTI1B-202ENST00000553619 COL11A2P13942 1736 aaPredicted RBP5.94□□□□□ -1.46
VTI1B-202ENST00000553619 A0A0D9SFI3 127 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 F8W735 103 aaPredicted RBP5.94□□□□□ -1.46
VTI1B-202ENST00000553619 GPAA1O43292 621 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 GRIN3BO60391 1043 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 HSPD1P10809 573 aaKnown RBP5.94□□□□□ -1.46
VTI1B-202ENST00000553619 KLRK1P26718 216 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 HSPA4P34932 840 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 EIF6P56537 245 aaKnown RBP5.94□□□□□ -1.46
VTI1B-202ENST00000553619 MECOMQ03112 1051 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 NAA30Q147X3 362 aaPredicted RBP5.94□□□□□ -1.46
VTI1B-202ENST00000553619 SETDB1Q15047 1291 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 RABEP1Q15276 862 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 ALX1Q15699 326 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 IMMTQ16891 758 aaKnown RBP5.94□□□□□ -1.46
VTI1B-202ENST00000553619 GIMAP6Q6P9H5 292 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 HHIPL2Q6UWX4 724 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 OLFM4Q6UX06 510 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 ARHGAP27Q6ZUM4 889 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 AMOTL1Q8IY63 956 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 OSBP2Q969R2 916 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 NSUN4Q96CB9 384 aaKnown RBP5.94□□□□□ -1.46
VTI1B-202ENST00000553619 GPR101Q96P66 508 aaPredicted RBP5.94□□□□□ -1.46
VTI1B-202ENST00000553619 STRBPQ96SI9 672 aaKnown RBP5.94□□□□□ -1.46
VTI1B-202ENST00000553619 SYT17Q9BSW7 474 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 CRNKL1Q9BZJ0 848 aaKnown RBP5.94□□□□□ -1.46
VTI1B-202ENST00000553619 LSG1Q9H089 658 aaKnown RBP5.94□□□□□ -1.46
VTI1B-202ENST00000553619 PUS7LQ9H0K6 701 aaKnown RBP5.94□□□□□ -1.46
VTI1B-202ENST00000553619 DBNDD1Q9H9R9 158 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 ZNRF3Q9ULT6 936 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 MTMR7Q9Y216 660 aa5.94□□□□□ -1.46
VTI1B-202ENST00000553619 DUOX1Q9NRD9 1551 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 DOCK2Q92608 1830 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 TCRBV5S4A2TA0A5A2 114 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 ZNF213O14771 459 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 RPLP1P05386 114 aaKnown RBP5.93□□□□□ -1.46
VTI1B-202ENST00000553619 SLC3A2P08195 630 aaKnown RBP5.93□□□□□ -1.46
VTI1B-202ENST00000553619 VIL1P09327 827 aaKnown RBP5.93□□□□□ -1.46
VTI1B-202ENST00000553619 HMGB1P09429 215 aaKnown RBP5.93□□□□□ -1.46
VTI1B-202ENST00000553619 PRDX5P30044 214 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 MCM2P49736 904 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 NT5C2P49902 561 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 TRDNQ13061 729 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 NECTIN1Q15223 517 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 COL13A1Q5TAT6 717 aaPredicted RBP5.93□□□□□ -1.46
VTI1B-202ENST00000553619 TTC39BQ5VTQ0 682 aaPredicted RBP5.93□□□□□ -1.46
VTI1B-202ENST00000553619 CIAPIN1Q6FI81 312 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 IFNL3Q8IZI9 196 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 CACTIN-AS1Q8N1I8 211 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 AGGF1Q8N302 714 aaeCLIP5.93□□□□□ -1.46
VTI1B-202ENST00000553619 AGBL3Q8NEM8 1001 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 TEKT1Q969V4 418 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 CHMP4CQ96CF2 233 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 SEC62Q99442 399 aaKnown RBP5.93□□□□□ -1.46
VTI1B-202ENST00000553619 TM6SF1Q9BZW5 370 aa5.93□□□□□ -1.46
VTI1B-202ENST00000553619 MRPL18Q9H0U6 180 aaKnown RBP5.93□□□□□ -1.46
VTI1B-202ENST00000553619 SRA1Q9HD15 236 aaKnown RBP5.93□□□□□ -1.46
VTI1B-202ENST00000553619 ATP8A2Q9NTI2 1148 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms