RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 PTGS1P23219 599 aa14.62□□□□□ -0.07
SIX1-202ENST00000553535 TMEM63BQ5T3F8 832 aa14.62□□□□□ -0.07
SIX1-202ENST00000553535 CXCL17Q6UXB2 119 aa14.62□□□□□ -0.07
SIX1-202ENST00000553535 C16orf59Q7L2K0 433 aa14.62□□□□□ -0.07
SIX1-202ENST00000553535 EEPD1Q7L9B9 569 aa14.62□□□□□ -0.07
SIX1-202ENST00000553535 TLK2Q86UE8 772 aa14.62□□□□□ -0.07
SIX1-202ENST00000553535 TBC1D10CQ8IV04 446 aa14.62□□□□□ -0.07
SIX1-202ENST00000553535 AP5M1Q9H0R1 490 aa14.62□□□□□ -0.07
SIX1-202ENST00000553535 VTA1Q9NP79 307 aa14.62□□□□□ -0.07
SIX1-202ENST00000553535 NFIBO00712 420 aa14.61□□□□□ -0.07
SIX1-202ENST00000553535 CABYRO75952 493 aa14.61□□□□□ -0.07
SIX1-202ENST00000553535 MFAP1P55081 439 aaKnown RBP14.61□□□□□ -0.07
SIX1-202ENST00000553535 ZNF543Q08ER8 600 aa14.61□□□□□ -0.07
SIX1-202ENST00000553535 FSCN1Q16658 493 aaKnown RBP14.61□□□□□ -0.07
SIX1-202ENST00000553535 FBXO16Q8IX29 292 aaPredicted RBP14.61□□□□□ -0.07
SIX1-202ENST00000553535 CLEC4DQ8WXI8 215 aa14.61□□□□□ -0.07
SIX1-202ENST00000553535 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.61□□□□□ -0.07
SIX1-202ENST00000553535 RNF41Q9H4P4 317 aaPredicted RBP14.61□□□□□ -0.07
SIX1-202ENST00000553535 GRIN2DO15399 1336 aa14.61□□□□□ -0.07
SIX1-202ENST00000553535 LOC102724159A0A0B4J2E5 919 aa14.6□□□□□ -0.07
SIX1-202ENST00000553535 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.6□□□□□ -0.07
SIX1-202ENST00000553535 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.6□□□□□ -0.07
SIX1-202ENST00000553535 PWP2Q15269 919 aaKnown RBP14.6□□□□□ -0.07
SIX1-202ENST00000553535 KIAA1211Q6ZU35 1233 aa14.6□□□□□ -0.07
SIX1-202ENST00000553535 ADD3Q9UEY8 706 aaKnown RBP14.6□□□□□ -0.07
SIX1-202ENST00000553535 PNMA2Q9UL42 364 aa14.6□□□□□ -0.07
SIX1-202ENST00000553535 RBM47A0AV96 593 aaKnown RBP14.6□□□□□ -0.07
SIX1-202ENST00000553535 ZNF213O14771 459 aa14.6□□□□□ -0.07
SIX1-202ENST00000553535 TLR3O15455 904 aaKnown RBP14.6□□□□□ -0.07
SIX1-202ENST00000553535 ALDH5A1P51649 535 aaPredicted RBP14.6□□□□□ -0.07
SIX1-202ENST00000553535 PPIGQ13427 754 aaKnown RBP eCLIP14.6□□□□□ -0.07
SIX1-202ENST00000553535 ITGA7Q13683 1181 aa14.6□□□□□ -0.07
SIX1-202ENST00000553535 DUSP28Q4G0W2 176 aa14.6□□□□□ -0.07
SIX1-202ENST00000553535 TMEM240Q5SV17 173 aa14.6□□□□□ -0.07
SIX1-202ENST00000553535 DGKHQ86XP1 1220 aa14.6□□□□□ -0.07
SIX1-202ENST00000553535 EXOC6Q8TAG9 804 aa14.6□□□□□ -0.07
SIX1-202ENST00000553535 ESR2Q92731 530 aa14.6□□□□□ -0.07
SIX1-202ENST00000553535 SEZ6LQ9BYH1 1024 aa14.6□□□□□ -0.07
SIX1-202ENST00000553535 NEDD4P46934 1319 aa14.59□□□□□ -0.07
SIX1-202ENST00000553535 TMEM265A0A087WTH1 108 aa14.59□□□□□ -0.07
SIX1-202ENST00000553535 PTPDC1A2A3K4 754 aa14.59□□□□□ -0.07
SIX1-202ENST00000553535 ZEB2O60315 1214 aa14.59□□□□□ -0.07
SIX1-202ENST00000553535 CSF2RAP15509 400 aa14.59□□□□□ -0.07
SIX1-202ENST00000553535 RASIP1Q5U651 963 aa14.59□□□□□ -0.07
SIX1-202ENST00000553535 CWC27Q6UX04 472 aaKnown RBP14.59□□□□□ -0.07
SIX1-202ENST00000553535 TMEM199Q8N511 208 aa14.59□□□□□ -0.07
SIX1-202ENST00000553535 ANKS1AQ92625 1134 aa14.59□□□□□ -0.07
SIX1-202ENST00000553535 YTHDC1Q96MU7 727 aaKnown RBP14.59□□□□□ -0.07
SIX1-202ENST00000553535 ZKSCAN3Q9BRR0 538 aa14.59□□□□□ -0.07
SIX1-202ENST00000553535 PPP1R12CQ9BZL4 782 aa14.59□□□□□ -0.07
SIX1-202ENST00000553535 WDR19Q8NEZ3 1342 aa14.58□□□□□ -0.08
SIX1-202ENST00000553535 CYP2C18P33260 490 aa14.58□□□□□ -0.08
SIX1-202ENST00000553535 NT5C2P49902 561 aa14.58□□□□□ -0.08
SIX1-202ENST00000553535 GPATCH4Q5T3I0 446 aaKnown RBP14.58□□□□□ -0.08
SIX1-202ENST00000553535 SLC30A10Q6XR72 485 aa14.58□□□□□ -0.08
SIX1-202ENST00000553535 RNF207Q6ZRF8 634 aa14.58□□□□□ -0.08
SIX1-202ENST00000553535 MYLIPQ8WY64 445 aa14.58□□□□□ -0.08
SIX1-202ENST00000553535 LAMA4Q16363 1823 aa14.57□□□□□ -0.08
SIX1-202ENST00000553535 GOLGA8HP0CJ92 632 aa14.57□□□□□ -0.08
SIX1-202ENST00000553535 CALML3P27482 149 aa14.57□□□□□ -0.08
SIX1-202ENST00000553535 RPS6P62753 249 aaKnown RBP14.57□□□□□ -0.08
SIX1-202ENST00000553535 CCDC178Q5BJE1 867 aa14.57□□□□□ -0.08
SIX1-202ENST00000553535 ZNF365Q70YC5 407 aa14.57□□□□□ -0.08
SIX1-202ENST00000553535 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.57□□□□□ -0.08
SIX1-202ENST00000553535 DSCC1Q9BVC3 393 aa14.57□□□□□ -0.08
SIX1-202ENST00000553535 WDR11Q9BZH6 1224 aa14.57□□□□□ -0.08
SIX1-202ENST00000553535 UBA5Q9GZZ9 404 aa14.57□□□□□ -0.08
SIX1-202ENST00000553535 DIAPH3Q9NSV4 1193 aa14.57□□□□□ -0.08
SIX1-202ENST00000553535 HIP1O00291 1037 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 KDM4AO75164 1064 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 ACRP10323 421 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 EDNRBP24530 442 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 DNAJB2P25686 324 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 PSMC6P62333 389 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 RGS22Q8NE09 1264 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 DNERQ8NFT8 737 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 TRPV6Q9H1D0 765 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 CPVLQ9H3G5 476 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 IL23AQ9NPF7 189 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 ZSWIM5Q9P217 1185 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 CHD9Q3L8U1 2897 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 B4GALT4O60513 344 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 IQCA1Q86XH1 822 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 PNMA1Q8ND90 353 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 MAFAQ8NHW3 353 aaPredicted RBP14.56□□□□□ -0.08
SIX1-202ENST00000553535 NOC4LQ9BVI4 516 aaKnown RBP14.56□□□□□ -0.08
SIX1-202ENST00000553535 HIPK3Q9H422 1215 aa14.56□□□□□ -0.08
SIX1-202ENST00000553535 UMODL1Q5DID0 1318 aa14.55□□□□□ -0.08
SIX1-202ENST00000553535 VCANP13611 3396 aa14.55□□□□□ -0.08
SIX1-202ENST00000553535 B4E1Z4 1266 aa14.55□□□□□ -0.08
SIX1-202ENST00000553535 PURAQ00577 322 aaKnown RBP14.55□□□□□ -0.08
SIX1-202ENST00000553535 PDE4DQ08499 809 aa14.55□□□□□ -0.08
SIX1-202ENST00000553535 GRIN2CQ14957 1233 aa14.55□□□□□ -0.08
SIX1-202ENST00000553535 PSRC1Q6PGN9 363 aaPredicted RBP14.55□□□□□ -0.08
SIX1-202ENST00000553535 HERVK_113Q902F9 699 aa14.55□□□□□ -0.08
SIX1-202ENST00000553535 TBC1D5Q92609 795 aa14.55□□□□□ -0.08
SIX1-202ENST00000553535 ZSCAN10Q96SZ4 725 aaPredicted RBP14.55□□□□□ -0.08
SIX1-202ENST00000553535 MAF1Q9H063 256 aa14.55□□□□□ -0.08
SIX1-202ENST00000553535 ZNF576Q9H609 170 aa14.55□□□□□ -0.08
SIX1-202ENST00000553535 POLR3EQ9NVU0 708 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms