RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 SLITRK4Q8IW52 837 aa6.26□□□□□ -1.41
ATXN3-220ENST00000553491 TP53INP2Q8IXH6 220 aa6.26□□□□□ -1.41
ATXN3-220ENST00000553491 STK11IPQ8N1F8 1099 aa6.26□□□□□ -1.41
ATXN3-220ENST00000553491 SEC16BQ96JE7 1060 aa6.26□□□□□ -1.41
ATXN3-220ENST00000553491 SPATA32Q96LK8 384 aa6.26□□□□□ -1.41
ATXN3-220ENST00000553491 LRRC3Q9BY71 257 aa6.26□□□□□ -1.41
ATXN3-220ENST00000553491 EFR3BQ9Y2G0 817 aa6.26□□□□□ -1.41
ATXN3-220ENST00000553491 CRB1P82279 1406 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 NFAT5O94916 1531 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 TMEM265A0A087WTH1 108 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 PRR33A8MZF0 331 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 ATP2B1P20020 1258 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 SOX9P48436 509 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 NASPP49321 788 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-220ENST00000553491 MPP2Q14168 576 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 SEZ6Q53EL9 994 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 MCATQ8IVS2 390 aaKnown RBP6.25□□□□□ -1.41
ATXN3-220ENST00000553491 DHX38Q92620 1227 aaKnown RBP6.25□□□□□ -1.41
ATXN3-220ENST00000553491 NKD1Q969G9 470 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 ACSF2Q96CM8 615 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-220ENST00000553491 TMEM87BQ96K49 555 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.25□□□□□ -1.41
ATXN3-220ENST00000553491 ADAM30Q9UKF2 790 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 MAPK8IP1Q9UQF2 711 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 THRAP3Q9Y2W1 955 aaKnown RBP6.25□□□□□ -1.41
ATXN3-220ENST00000553491 CORINQ9Y5Q5 1042 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 SNX11Q9Y5W9 270 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 COL5A2P05997 1499 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-220ENST00000553491 FAM208AQ9UK61 1670 aaKnown RBP6.25□□□□□ -1.41
ATXN3-220ENST00000553491 PEAK1Q9H792 1746 aa6.25□□□□□ -1.41
ATXN3-220ENST00000553491 CDK12Q9NYV4 1490 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-220ENST00000553491 PGRP06401 933 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 ZNF865P0CJ78 1059 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-220ENST00000553491 IL2RBP14784 551 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 ITIH2P19823 946 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 FUT4P22083 530 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 AOC3Q16853 763 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 NBPF6Q5VWK0 638 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 SLC6A19Q695T7 634 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 LETMD1Q6P1Q0 360 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 AGBL5Q8NDL9 886 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 RAPGEF4Q8WZA2 1011 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 UBXN4Q92575 508 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 SYTL4Q96C24 671 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-220ENST00000553491 NBPF4Q96M43 638 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 MIPEPQ99797 713 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 PRDM5Q9NQX1 630 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-220ENST00000553491 POLKQ9UBT6 870 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 POLR3KQ9Y2Y1 108 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-220ENST00000553491 ITGB4P16144 1822 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 RGPD1P0DJD0 1748 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 PARP4Q9UKK3 1724 aaKnown RBP6.24□□□□□ -1.41
ATXN3-220ENST00000553491 OVOS2A0A0J9YW53 1432 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 OVOS2Q6IE36 1432 aa6.24□□□□□ -1.41
ATXN3-220ENST00000553491 SMG6Q86US8 1419 aaKnown RBP6.24□□□□□ -1.41
ATXN3-220ENST00000553491 GTF2F1P35269 517 aaKnown RBP eCLIP6.23□□□□□ -1.41
ATXN3-220ENST00000553491 MTHFSP49914 203 aa6.23□□□□□ -1.41
ATXN3-220ENST00000553491 COL9A2Q14055 689 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-220ENST00000553491 CWF19L2Q2TBE0 894 aaKnown RBP6.23□□□□□ -1.41
ATXN3-220ENST00000553491 TMEM201Q5SNT2 666 aa6.23□□□□□ -1.41
ATXN3-220ENST00000553491 REC114Q7Z4M0 266 aa6.23□□□□□ -1.41
ATXN3-220ENST00000553491 DEFB132Q7Z7B7 95 aa6.23□□□□□ -1.41
ATXN3-220ENST00000553491 ZCRB1Q8TBF4 217 aaKnown RBP6.23□□□□□ -1.41
ATXN3-220ENST00000553491 PPP1R13LQ8WUF5 828 aa6.23□□□□□ -1.41
ATXN3-220ENST00000553491 HRASLS5Q96KN8 279 aa6.23□□□□□ -1.41
ATXN3-220ENST00000553491 DPH2Q9BQC3 489 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-220ENST00000553491 BRMS1Q9HCU9 246 aa6.23□□□□□ -1.41
ATXN3-220ENST00000553491 SEMA3GQ9NS98 782 aa6.23□□□□□ -1.41
ATXN3-220ENST00000553491 ADAMTS6Q9UKP5 1117 aa6.23□□□□□ -1.41
ATXN3-220ENST00000553491 U2SURPO15042 1029 aaKnown RBP6.22□□□□□ -1.41
ATXN3-220ENST00000553491 BPNT1O95861 308 aa6.22□□□□□ -1.41
ATXN3-220ENST00000553491 ITGB5P18084 799 aa6.22□□□□□ -1.41
ATXN3-220ENST00000553491 PDE4BQ07343 736 aa6.22□□□□□ -1.41
ATXN3-220ENST00000553491 ARHGAP27Q6ZUM4 889 aa6.22□□□□□ -1.41
ATXN3-220ENST00000553491 MARCH10Q8NA82 808 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-220ENST00000553491 DNAJB8Q8NHS0 232 aa6.22□□□□□ -1.41
ATXN3-220ENST00000553491 XAGE3Q8WTP9 111 aa6.22□□□□□ -1.41
ATXN3-220ENST00000553491 ARMC5Q96C12 935 aa6.22□□□□□ -1.41
ATXN3-220ENST00000553491 FMNL2Q96PY5 1086 aa6.22□□□□□ -1.41
ATXN3-220ENST00000553491 MBNL3Q9NUK0 354 aaKnown RBP6.22□□□□□ -1.41
ATXN3-220ENST00000553491 PPT2Q9UMR5 302 aa6.22□□□□□ -1.41
ATXN3-220ENST00000553491 CAPN6Q9Y6Q1 641 aa6.22□□□□□ -1.41
ATXN3-220ENST00000553491 BLMP54132 1417 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-220ENST00000553491 PITPNM2Q9BZ72 1349 aa6.22□□□□□ -1.41
ATXN3-220ENST00000553491 FLT4P35916 1363 aa6.21□□□□□ -1.41
ATXN3-220ENST00000553491 THSD7AQ9UPZ6 1657 aa6.21□□□□□ -1.42
ATXN3-220ENST00000553491 BTBD11A6QL63 1104 aa6.21□□□□□ -1.42
ATXN3-220ENST00000553491 UPK3BL1B0FP48 263 aa6.21□□□□□ -1.42
ATXN3-220ENST00000553491 UPK3BL2E5RIL1 263 aa6.21□□□□□ -1.42
ATXN3-220ENST00000553491 MCM4P33991 863 aa6.21□□□□□ -1.42
ATXN3-220ENST00000553491 CLCQ05315 142 aa6.21□□□□□ -1.42
ATXN3-220ENST00000553491 EIF4A2Q14240 407 aaKnown RBP6.21□□□□□ -1.42
ATXN3-220ENST00000553491 ZNF792Q3KQV3 632 aa6.21□□□□□ -1.42
ATXN3-220ENST00000553491 SFRP5Q5T4F7 317 aa6.21□□□□□ -1.42
ATXN3-220ENST00000553491 CDH24Q86UP0 819 aa6.21□□□□□ -1.42
ATXN3-220ENST00000553491 CFAP53Q96M91 514 aa6.21□□□□□ -1.42
ATXN3-220ENST00000553491 DNAJC2Q99543 621 aaKnown RBP6.21□□□□□ -1.42
ATXN3-220ENST00000553491 ST14Q9Y5Y6 855 aa6.21□□□□□ -1.42
ATXN3-220ENST00000553491 LRRC37A3O60309 1634 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms