RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 TTC14Q96N46 770 aa11.05□□□□□ -0.64
CHD8-203ENST00000553283 WDR11Q9BZH6 1224 aa11.05□□□□□ -0.64
CHD8-203ENST00000553283 MTIF3Q9H2K0 278 aaKnown RBP11.05□□□□□ -0.64
CHD8-203ENST00000553283 CXXC1Q9P0U4 656 aaPredicted RBP11.05□□□□□ -0.64
CHD8-203ENST00000553283 MSRAQ9UJ68 235 aa11.05□□□□□ -0.64
CHD8-203ENST00000553283 UMODL1Q5DID0 1318 aa11.05□□□□□ -0.64
CHD8-203ENST00000553283 FRMPD2Q68DX3 1309 aaPredicted RBP11.05□□□□□ -0.64
CHD8-203ENST00000553283 PTPDC1A2A3K4 754 aa11.04□□□□□ -0.64
CHD8-203ENST00000553283 PDHBP11177 359 aa11.04□□□□□ -0.64
CHD8-203ENST00000553283 AKNAD1Q5T1N1 836 aa11.04□□□□□ -0.64
CHD8-203ENST00000553283 RNF207Q6ZRF8 634 aa11.04□□□□□ -0.64
CHD8-203ENST00000553283 OTOP2Q7RTS6 562 aa11.04□□□□□ -0.64
CHD8-203ENST00000553283 RPUSD2Q8IZ73 545 aaKnown RBP11.04□□□□□ -0.64
CHD8-203ENST00000553283 CLEC4DQ8WXI8 215 aa11.04□□□□□ -0.64
CHD8-203ENST00000553283 CRBNQ96SW2 442 aa11.04□□□□□ -0.64
CHD8-203ENST00000553283 GAS2L1Q99501 681 aaPredicted RBP11.04□□□□□ -0.64
CHD8-203ENST00000553283 WNT8AQ9H1J5 351 aa11.04□□□□□ -0.64
CHD8-203ENST00000553283 ALDH8A1Q9H2A2 487 aaPredicted RBP11.04□□□□□ -0.64
CHD8-203ENST00000553283 PRDM12Q9H4Q4 367 aa11.04□□□□□ -0.64
CHD8-203ENST00000553283 POLR3EQ9NVU0 708 aa11.04□□□□□ -0.64
CHD8-203ENST00000553283 ZMYM6O95789 1325 aa11.04□□□□□ -0.64
CHD8-203ENST00000553283 SUPT20HL2P0C7V6 817 aa11.03□□□□□ -0.64
CHD8-203ENST00000553283 SNHG28P0DPA3 235 aa11.03□□□□□ -0.64
CHD8-203ENST00000553283 PCP11498 1178 aaKnown RBP11.03□□□□□ -0.64
CHD8-203ENST00000553283 CALML3P27482 149 aa11.03□□□□□ -0.64
CHD8-203ENST00000553283 CPT1AP50416 773 aa11.03□□□□□ -0.64
CHD8-203ENST00000553283 HAND2P61296 217 aa11.03□□□□□ -0.64
CHD8-203ENST00000553283 PURAQ00577 322 aaKnown RBP11.03□□□□□ -0.64
CHD8-203ENST00000553283 ZNF543Q08ER8 600 aa11.03□□□□□ -0.64
CHD8-203ENST00000553283 NMIQ13287 307 aaPredicted RBP11.03□□□□□ -0.64
CHD8-203ENST00000553283 MFSD6Q6ZSS7 791 aa11.03□□□□□ -0.64
CHD8-203ENST00000553283 ZNF589Q86UQ0 364 aaPredicted RBP11.03□□□□□ -0.64
CHD8-203ENST00000553283 SLC28A3Q9HAS3 691 aa11.03□□□□□ -0.64
CHD8-203ENST00000553283 PRUNE2Q8WUY3 3088 aa11.03□□□□□ -0.64
CHD8-203ENST00000553283 MYO9BQ13459 2157 aa11.03□□□□□ -0.64
CHD8-203ENST00000553283 B4DLN1 442 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 NKRFO15226 690 aaKnown RBP eCLIP11.02□□□□□ -0.65
CHD8-203ENST00000553283 MYL3P08590 195 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 EDNRBP24530 442 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 MRPL12P52815 198 aaKnown RBP11.02□□□□□ -0.65
CHD8-203ENST00000553283 RPS6P62753 249 aaKnown RBP11.02□□□□□ -0.65
CHD8-203ENST00000553283 PDE4DQ08499 809 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 ADGRE1Q14246 886 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 BRDTQ58F21 947 aaPredicted RBP11.02□□□□□ -0.65
CHD8-203ENST00000553283 TJAP1Q5JTD0 557 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 SLC30A10Q6XR72 485 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 DGKHQ86XP1 1220 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 RGS22Q8NE09 1264 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 DNERQ8NFT8 737 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 OR6J1Q8NGC5 347 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 PPM1EQ8WY54 764 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 VWCEQ96DN2 955 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 SCLYQ96I15 445 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 MPHOSPH6Q99547 160 aaKnown RBP11.02□□□□□ -0.65
CHD8-203ENST00000553283 MTG1Q9BT17 334 aaPredicted RBP11.02□□□□□ -0.65
CHD8-203ENST00000553283 NKX2-4Q9H2Z4 354 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 RNF41Q9H4P4 317 aaPredicted RBP11.02□□□□□ -0.65
CHD8-203ENST00000553283 PRDM6Q9NQX0 595 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 GPHNQ9NQX3 736 aaPredicted RBP11.02□□□□□ -0.65
CHD8-203ENST00000553283 TRMT13Q9NUP7 481 aaKnown RBP11.02□□□□□ -0.65
CHD8-203ENST00000553283 YBX2Q9Y2T7 364 aaKnown RBP11.02□□□□□ -0.65
CHD8-203ENST00000553283 SLC4A7Q9Y6M7 1214 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 CCDC171Q6TFL3 1326 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 WDR19Q8NEZ3 1342 aa11.02□□□□□ -0.65
CHD8-203ENST00000553283 CHD9Q3L8U1 2897 aa11.01□□□□□ -0.65
CHD8-203ENST00000553283 A6NJR5 290 aa11.01□□□□□ -0.65
CHD8-203ENST00000553283 TRIM6-TRIM34B2RNG4 842 aa11.01□□□□□ -0.65
CHD8-203ENST00000553283 KPNA6O60684 536 aa11.01□□□□□ -0.65
CHD8-203ENST00000553283 CYP2C9P11712 490 aa11.01□□□□□ -0.65
CHD8-203ENST00000553283 MFAP1P55081 439 aaKnown RBP11.01□□□□□ -0.65
CHD8-203ENST00000553283 PPP2R5BQ15173 497 aa11.01□□□□□ -0.65
CHD8-203ENST00000553283 NBPF20Q3BBV1 942 aa11.01□□□□□ -0.65
CHD8-203ENST00000553283 GPATCH4Q5T3I0 446 aaKnown RBP11.01□□□□□ -0.65
CHD8-203ENST00000553283 TBC1D10CQ8IV04 446 aa11.01□□□□□ -0.65
CHD8-203ENST00000553283 SCFD2Q8WU76 684 aa11.01□□□□□ -0.65
CHD8-203ENST00000553283 ESR2Q92731 530 aa11.01□□□□□ -0.65
CHD8-203ENST00000553283 RILPL2Q969X0 211 aa11.01□□□□□ -0.65
CHD8-203ENST00000553283 MAF1Q9H063 256 aa11.01□□□□□ -0.65
CHD8-203ENST00000553283 CDH23Q9H251 3354 aa11.01□□□□□ -0.65
CHD8-203ENST00000553283 TNKSO95271 1327 aa11.01□□□□□ -0.65
CHD8-203ENST00000553283 EYSQ5T1H1 3165 aa11□□□□□ -0.65
CHD8-203ENST00000553283 VCANP13611 3396 aa11□□□□□ -0.65
CHD8-203ENST00000553283 PFKMP08237 780 aa11□□□□□ -0.65
CHD8-203ENST00000553283 GOLGA8HP0CJ92 632 aa11□□□□□ -0.65
CHD8-203ENST00000553283 TXNP10599 105 aaKnown RBP11□□□□□ -0.65
CHD8-203ENST00000553283 SDSP20132 328 aa11□□□□□ -0.65
CHD8-203ENST00000553283 IGFBP4P22692 258 aa11□□□□□ -0.65
CHD8-203ENST00000553283 NT5C2P49902 561 aa11□□□□□ -0.65
CHD8-203ENST00000553283 RABGGTBP53611 331 aa11□□□□□ -0.65
CHD8-203ENST00000553283 AAMPQ13685 434 aa11□□□□□ -0.65
CHD8-203ENST00000553283 CCDC178Q5BJE1 867 aa11□□□□□ -0.65
CHD8-203ENST00000553283 NFRKBQ6P4R8 1299 aa11□□□□□ -0.65
CHD8-203ENST00000553283 ATXN2LQ8WWM7 1075 aaKnown RBP11□□□□□ -0.65
CHD8-203ENST00000553283 ANKS1AQ92625 1134 aa11□□□□□ -0.65
CHD8-203ENST00000553283 COPS5Q92905 334 aa11□□□□□ -0.65
CHD8-203ENST00000553283 ZKSCAN3Q9BRR0 538 aa11□□□□□ -0.65
CHD8-203ENST00000553283 LNPKQ9C0E8 428 aa11□□□□□ -0.65
CHD8-203ENST00000553283 UBA5Q9GZZ9 404 aa11□□□□□ -0.65
CHD8-203ENST00000553283 PCDHA11Q9Y5I1 949 aa11□□□□□ -0.65
CHD8-203ENST00000553283 RAD50Q92878 1312 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms