RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 HDGFL2Q7Z4V5 671 aaPredicted RBP7.44□□□□□ -1.22
SCFD1-208ENST00000553278 CBARPQ8N350 705 aaPredicted RBP7.44□□□□□ -1.22
SCFD1-208ENST00000553278 IL17RAQ96F46 866 aa7.44□□□□□ -1.22
SCFD1-208ENST00000553278 AHCYL2Q96HN2 611 aaKnown RBP7.44□□□□□ -1.22
SCFD1-208ENST00000553278 EMC7Q9NPA0 242 aa7.44□□□□□ -1.22
SCFD1-208ENST00000553278 THG1LQ9NWX6 298 aaKnown RBP7.44□□□□□ -1.22
SCFD1-208ENST00000553278 B4GALT6Q9UBX8 382 aa7.44□□□□□ -1.22
SCFD1-208ENST00000553278 KCNH3Q9ULD8 1083 aa7.44□□□□□ -1.22
SCFD1-208ENST00000553278 PNMA8BQ9ULN7 279 aaPredicted RBP7.44□□□□□ -1.22
SCFD1-208ENST00000553278 ST14Q9Y5Y6 855 aa7.44□□□□□ -1.22
SCFD1-208ENST00000553278 WASHC2AQ641Q2 1341 aa7.44□□□□□ -1.22
SCFD1-208ENST00000553278 A0A0A0MRY4 1105 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-208ENST00000553278 FAM181BA6NEQ2 426 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 WDR64B1ANS9 1081 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 H0Y8X5 98 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 ADAMTS2O95450 1211 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 GSNP06396 782 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 THBDP07204 575 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 RAB6AP20340 208 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 LTBRP36941 435 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 RECQLP46063 649 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-208ENST00000553278 USP11P51784 963 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 SESN3P58005 492 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 KLF1Q13351 362 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-208ENST00000553278 TMEM177Q53S58 311 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 E4F1Q66K89 784 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-208ENST00000553278 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.43□□□□□ -1.22
SCFD1-208ENST00000553278 CHST14Q8NCH0 376 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 COPS5Q92905 334 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 COX4I2Q96KJ9 171 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 YIPF2Q9BWQ6 316 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 CELF4Q9BZC1 486 aaKnown RBP7.43□□□□□ -1.22
SCFD1-208ENST00000553278 UBA5Q9GZZ9 404 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 ACSS3Q9H6R3 686 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 PRDM16Q9HAZ2 1276 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 PRDM10Q9NQV6 1147 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 GIT1Q9Y2X7 761 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 DAGLAQ9Y4D2 1042 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 NPFFR2Q9Y5X5 522 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 BACE2Q9Y5Z0 518 aa7.43□□□□□ -1.22
SCFD1-208ENST00000553278 C2orf71A6NGG8 1288 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 H3BM21 787 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 STXBP3O00186 592 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 IFRD1O00458 451 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-208ENST00000553278 TRAF5O00463 557 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 GSTA4O15217 222 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 PRAMEF1O95521 474 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 MT-CO1P00395 513 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 CFBP00751 764 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 CD3EP07766 207 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 NBPF7P0C2Y1 421 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-208ENST00000553278 SRGAP2CP0DJJ0 459 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 PF4V1P10720 104 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 IARSP41252 1262 aaKnown RBP7.42□□□□□ -1.22
SCFD1-208ENST00000553278 NOP2P46087 812 aaKnown RBP7.42□□□□□ -1.22
SCFD1-208ENST00000553278 DGKGP49619 791 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 ERVK-21P61565 698 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 TESK1Q15569 626 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 ZRSR2Q15696 482 aaKnown RBP7.42□□□□□ -1.22
SCFD1-208ENST00000553278 FAM47CQ5HY64 1035 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 TMEM240Q5SV17 173 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 GPAT2Q6NUI2 795 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 IGF2-ASQ6U949 168 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 TMC3Q7Z5M5 1100 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 APBB1IPQ7Z5R6 666 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-208ENST00000553278 PNMA8AQ86V59 439 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-208ENST00000553278 TPH2Q8IWU9 490 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 NPLOC4Q8TAT6 608 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 FRS2Q8WU20 508 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 CHTF18Q8WVB6 975 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 SCYL1Q96KG9 808 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 SPTLC3Q9NUV7 552 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 RCAN3Q9UKA8 241 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 TPX2Q9ULW0 747 aaKnown RBP7.42□□□□□ -1.22
SCFD1-208ENST00000553278 COQ6Q9Y2Z9 468 aa7.42□□□□□ -1.22
SCFD1-208ENST00000553278 SHISA8B8ZZ34 492 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 MEIS1O00470 390 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 AURKAO14965 403 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 LRRN2O75325 713 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 IFIT2P09913 472 aaKnown RBP7.41□□□□□ -1.22
SCFD1-208ENST00000553278 VSIG8P0DPA2 414 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 BCRP11274 1271 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 TRIM27P14373 513 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 ATP2A2P16615 1042 aaKnown RBP7.41□□□□□ -1.22
SCFD1-208ENST00000553278 VCAM1P19320 739 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 CYP2C19P33261 490 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 KCNAB2Q13303 367 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 GTF2H3Q13889 308 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 INAVAQ3KP66 663 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 HSP90AB4PQ58FF6 505 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 IQCEQ6IPM2 695 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 LBX2Q6XYB7 198 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 CPA6Q8N4T0 437 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 PCDH19Q8TAB3 1148 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 PANK1Q8TE04 598 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 CLIP3Q96DZ5 547 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 GPRC5CQ9NQ84 441 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 ENAMQ9NRM1 1142 aa7.41□□□□□ -1.22
SCFD1-208ENST00000553278 MRFAP1Q9Y605 127 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms