RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 ZMYND12Q9H0C1 365 aa21.19■□□□□ 0.98
LRP1-204ENST00000553277 KCNJ14Q9UNX9 436 aa21.19■□□□□ 0.98
LRP1-204ENST00000553277 TRIM75PA6NK02 468 aa21.18■□□□□ 0.98
LRP1-204ENST00000553277 PPP1R11O60927 126 aaPredicted RBP21.18■□□□□ 0.98
LRP1-204ENST00000553277 MDM2Q00987 491 aaPredicted RBP21.18■□□□□ 0.98
LRP1-204ENST00000553277 FMR1Q06787 632 aaKnown RBP eCLIP21.18■□□□□ 0.98
LRP1-204ENST00000553277 PPP1R18Q6NYC8 613 aa21.18■□□□□ 0.98
LRP1-204ENST00000553277 CCDC150Q8NCX0 1101 aa21.18■□□□□ 0.98
LRP1-204ENST00000553277 CNNM3Q8NE01 707 aa21.18■□□□□ 0.98
LRP1-204ENST00000553277 ZNF526Q8TF50 670 aaPredicted RBP21.18■□□□□ 0.98
LRP1-204ENST00000553277 CCDC12Q8WUD4 166 aaPredicted RBP21.18■□□□□ 0.98
LRP1-204ENST00000553277 GPKOWQ92917 476 aaPredicted RBP eCLIP21.18■□□□□ 0.98
LRP1-204ENST00000553277 PPIL2Q13356 520 aa21.18■□□□□ 0.98
LRP1-204ENST00000553277 TTLL12Q14166 644 aaPredicted RBP21.18■□□□□ 0.98
LRP1-204ENST00000553277 QRICH1Q2TAL8 776 aa21.18■□□□□ 0.98
LRP1-204ENST00000553277 CT47A1Q5JQC4 288 aaPredicted RBP21.18■□□□□ 0.98
LRP1-204ENST00000553277 HOMER1Q86YM7 354 aa21.18■□□□□ 0.98
LRP1-204ENST00000553277 TRIML1Q8N9V2 468 aa21.18■□□□□ 0.98
LRP1-204ENST00000553277 TNFRSF25Q93038 417 aa21.18■□□□□ 0.98
LRP1-204ENST00000553277 CLIC6Q96NY7 704 aa21.18■□□□□ 0.98
LRP1-204ENST00000553277 RANBP17Q9H2T7 1088 aaKnown RBP21.18■□□□□ 0.98
LRP1-204ENST00000553277 PAXBP1Q9Y5B6 917 aa21.18■□□□□ 0.98
LRP1-204ENST00000553277 RLFQ13129 1914 aa21.17■□□□□ 0.98
LRP1-204ENST00000553277 M0R2N6 131 aa21.17■□□□□ 0.98
LRP1-204ENST00000553277 CBFA2T2O43439 604 aa21.17■□□□□ 0.98
LRP1-204ENST00000553277 MYL5Q02045 173 aa21.17■□□□□ 0.98
LRP1-204ENST00000553277 LONRF3Q496Y0 759 aa21.17■□□□□ 0.98
LRP1-204ENST00000553277 HEATR3Q7Z4Q2 680 aa21.17■□□□□ 0.98
LRP1-204ENST00000553277 TEX2Q8IWB9 1127 aa21.17■□□□□ 0.98
LRP1-204ENST00000553277 PRPF38AQ8NAV1 312 aaKnown RBP21.17■□□□□ 0.98
LRP1-204ENST00000553277 ELP3Q9H9T3 547 aa21.17■□□□□ 0.98
LRP1-204ENST00000553277 GBA2Q9HCG7 927 aaPredicted RBP21.17■□□□□ 0.98
LRP1-204ENST00000553277 PARP14Q460N5 1801 aa21.17■□□□□ 0.98
LRP1-204ENST00000553277 TRPM7Q96QT4 1865 aa21.17■□□□□ 0.98
LRP1-204ENST00000553277 A0A087WWV3 80 aa21.16■□□□□ 0.98
LRP1-204ENST00000553277 A0A0G2JLL6 359 aaPredicted RBP21.16■□□□□ 0.98
LRP1-204ENST00000553277 KRT2P35908 639 aa21.16■□□□□ 0.98
LRP1-204ENST00000553277 HMGCS2P54868 508 aa21.16■□□□□ 0.98
LRP1-204ENST00000553277 CCZ1BP86790 482 aa21.16■□□□□ 0.98
LRP1-204ENST00000553277 CCZ1P86791 482 aaPredicted RBP21.16■□□□□ 0.98
LRP1-204ENST00000553277 CDC37Q16543 378 aaPredicted RBP21.16■□□□□ 0.98
LRP1-204ENST00000553277 PRRT2Q7Z6L0 340 aaPredicted RBP21.16■□□□□ 0.98
LRP1-204ENST00000553277 CCDC34Q96HJ3 373 aa21.16■□□□□ 0.98
LRP1-204ENST00000553277 BRMS1Q9HCU9 246 aa21.16■□□□□ 0.98
LRP1-204ENST00000553277 IRF6O14896 467 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 FDX1P10109 184 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 SKILP12757 684 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 NLRP5P59047 1200 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 TRAF1Q13077 416 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 CST9Q5W186 159 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 CNKSR2Q8WXI2 1034 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 SLF1Q9BQI6 1058 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 FBXO28Q9NVF7 368 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 DACH1Q9UI36 760 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 PCDHA4Q9UN74 947 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 ADAMTS5Q9UNA0 930 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 LOC285556D6RIA3 1793 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 BIN1O00499 593 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 SARSP49591 514 aaKnown RBP21.15■□□□□ 0.98
LRP1-204ENST00000553277 C2orf69Q8N8R5 385 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 MLKLQ8NB16 471 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 PROCA1Q8NCQ7 364 aaPredicted RBP21.15■□□□□ 0.98
LRP1-204ENST00000553277 OXER1Q8TDS5 423 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 FERMT2Q96AC1 680 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 AMNQ9BXJ7 453 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 XPO4Q9C0E2 1151 aaKnown RBP21.15■□□□□ 0.98
LRP1-204ENST00000553277 RPAP3Q9H6T3 665 aaPredicted RBP21.15■□□□□ 0.98
LRP1-204ENST00000553277 PPP1R9AQ9ULJ8 1098 aa21.15■□□□□ 0.98
LRP1-204ENST00000553277 MYPNQ86TC9 1320 aa21.14■□□□□ 0.97
LRP1-204ENST00000553277 PASKQ96RG2 1323 aa21.14■□□□□ 0.97
LRP1-204ENST00000553277 KIF2AO00139 706 aaPredicted RBP21.14■□□□□ 0.97
LRP1-204ENST00000553277 KIF3CO14782 793 aa21.14■□□□□ 0.97
LRP1-204ENST00000553277 CELF2O95319 508 aaKnown RBP21.14■□□□□ 0.97
LRP1-204ENST00000553277 GNA11P29992 359 aa21.14■□□□□ 0.97
LRP1-204ENST00000553277 NAPAP54920 295 aa21.14■□□□□ 0.97
LRP1-204ENST00000553277 IKQ13123 557 aaPredicted RBP21.14■□□□□ 0.97
LRP1-204ENST00000553277 PNOCQ13519 176 aa21.14■□□□□ 0.97
LRP1-204ENST00000553277 DGKZQ13574 1117 aa21.14■□□□□ 0.97
LRP1-204ENST00000553277 SYCP1Q15431 976 aa21.14■□□□□ 0.97
LRP1-204ENST00000553277 BLIDQ8IZY5 108 aa21.14■□□□□ 0.97
LRP1-204ENST00000553277 SLC10A4Q96EP9 437 aa21.14■□□□□ 0.97
LRP1-204ENST00000553277 GPBP1L1Q9HC44 474 aaPredicted RBP21.14■□□□□ 0.97
LRP1-204ENST00000553277 TMOD4Q9NZQ9 345 aa21.14■□□□□ 0.97
LRP1-204ENST00000553277 IFNKQ9P0W0 207 aa21.14■□□□□ 0.97
LRP1-204ENST00000553277 PCDHB6Q9Y5E3 794 aa21.14■□□□□ 0.97
LRP1-204ENST00000553277 PCDHA5Q9Y5H7 936 aa21.14■□□□□ 0.97
LRP1-204ENST00000553277 CTIFO43310 598 aaKnown RBP21.13■□□□□ 0.97
LRP1-204ENST00000553277 NRDCO43847 1150 aa21.13■□□□□ 0.97
LRP1-204ENST00000553277 TUBB4AP04350 444 aa21.13■□□□□ 0.97
LRP1-204ENST00000553277 HOXA7P31268 230 aaPredicted RBP21.13■□□□□ 0.97
LRP1-204ENST00000553277 TRAPPC10P48553 1259 aa21.13■□□□□ 0.97
LRP1-204ENST00000553277 FANCCQ00597 558 aa21.13■□□□□ 0.97
LRP1-204ENST00000553277 NR5A1Q13285 461 aa21.13■□□□□ 0.97
LRP1-204ENST00000553277 POSTNQ15063 836 aa21.13■□□□□ 0.97
LRP1-204ENST00000553277 CATSPERGQ6ZRH7 1159 aa21.13■□□□□ 0.97
LRP1-204ENST00000553277 SPATA20Q8TB22 786 aa21.13■□□□□ 0.97
LRP1-204ENST00000553277 OPTNQ96CV9 577 aa21.13■□□□□ 0.97
LRP1-204ENST00000553277 OTUD5Q96G74 571 aa21.13■□□□□ 0.97
LRP1-204ENST00000553277 GLT8D2Q9H1C3 349 aa21.13■□□□□ 0.97
LRP1-204ENST00000553277 HSD3B7Q9H2F3 369 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms