RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 ORC2Q13416 577 aaPredicted RBP9.33□□□□□ -0.92
RAB5B-210ENST00000553116 KIAA1755Q5JYT7 1200 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 NBPF12Q5TAG4 269 aaPredicted RBP9.33□□□□□ -0.92
RAB5B-210ENST00000553116 PAXIP1Q6ZW49 1069 aaPredicted RBP9.33□□□□□ -0.92
RAB5B-210ENST00000553116 APOBEC3FQ8IUX4 373 aaKnown RBP9.33□□□□□ -0.92
RAB5B-210ENST00000553116 CALML4Q96GE6 196 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 UIMC1Q96RL1 719 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 GGA3Q9NZ52 723 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 CTDP1Q9Y5B0 961 aaPredicted RBP9.33□□□□□ -0.92
RAB5B-210ENST00000553116 RRP9O43818 475 aaKnown RBP9.33□□□□□ -0.92
RAB5B-210ENST00000553116 TRAF1Q13077 416 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 DHX8Q14562 1220 aaKnown RBP9.33□□□□□ -0.92
RAB5B-210ENST00000553116 DHX37Q8IY37 1157 aaKnown RBP9.33□□□□□ -0.92
RAB5B-210ENST00000553116 TRIML1Q8N9V2 468 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 TRPM4Q8TD43 1214 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 AK8Q96MA6 479 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 ZNF830Q96NB3 372 aaPredicted RBP9.33□□□□□ -0.92
RAB5B-210ENST00000553116 TANGO6Q9C0B7 1094 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 RNF181Q9P0P0 153 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 CFBP00751 764 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 HOXA13P31271 388 aaPredicted RBP9.33□□□□□ -0.92
RAB5B-210ENST00000553116 BTNL9Q6UXG8 535 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 FCHSD1Q86WN1 690 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 MLKLQ8NB16 471 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 TEPSINQ96N21 525 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 LRWD1Q9UFC0 647 aa9.33□□□□□ -0.92
RAB5B-210ENST00000553116 SMCHD1A6NHR9 2005 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 SERPINC1P01008 464 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 CDK11BP21127 795 aaKnown RBP9.32□□□□□ -0.92
RAB5B-210ENST00000553116 ZNF76P36508 570 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 CLK2P49760 499 aaKnown RBP9.32□□□□□ -0.92
RAB5B-210ENST00000553116 AP3B2Q13367 1082 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 PRKG1Q13976 671 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 HSP90AA4PQ58FG1 418 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 FAM160B2Q86V87 743 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 GPC2Q8N158 579 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 HOOK2Q96ED9 719 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 WRNIP1Q96S55 665 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 NAP1L4Q99733 375 aaKnown RBP9.32□□□□□ -0.92
RAB5B-210ENST00000553116 PICK1Q9NRD5 415 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 FBXO28Q9NVF7 368 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 GPRC5DQ9NZD1 345 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 POTEMA6NI47 508 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 GTPBP6O43824 516 aaPredicted RBP9.32□□□□□ -0.92
RAB5B-210ENST00000553116 GCFC2P16383 781 aaKnown RBP9.32□□□□□ -0.92
RAB5B-210ENST00000553116 PLCG1P19174 1290 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 INPP5BP32019 993 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 E2F4Q16254 413 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 TRMT44Q8IYL2 757 aaKnown RBP9.32□□□□□ -0.92
RAB5B-210ENST00000553116 TTC12Q9H892 705 aaPredicted RBP9.32□□□□□ -0.92
RAB5B-210ENST00000553116 FEM1BQ9UK73 627 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 ZKSCAN5Q9Y2L8 839 aa9.32□□□□□ -0.92
RAB5B-210ENST00000553116 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.32□□□□□ -0.921e-6■■■■□ 19.4
RAB5B-210ENST00000553116 IKBKBO14920 756 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 CTNND1O60716 968 aaKnown RBP9.31□□□□□ -0.92
RAB5B-210ENST00000553116 EPS15P42566 896 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 CUL4BQ13620 913 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 MORC3Q14149 939 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 TPD52L1Q16890 204 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-210ENST00000553116 PDXDC2PQ6P474 469 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 SARM1Q6SZW1 724 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-210ENST00000553116 PLA2G4DQ86XP0 818 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 GSDMAQ96QA5 445 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 CCSER1Q9C0I3 900 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 PGAP2Q9UHJ9 254 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 DICER1Q9UPY3 1922 aaKnown RBP9.31□□□□□ -0.92
RAB5B-210ENST00000553116 PHF20L1A8MW92 1017 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 BMP6P22004 513 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 DPYDQ12882 1025 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 MTMR2Q13614 643 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 NT5DC1Q5TFE4 455 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 KRT79Q5XKE5 535 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 PPP4R3AQ6IN85 833 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 SMYD4Q8IYR2 804 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-210ENST00000553116 SNX29Q8TEQ0 813 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 CCDC47Q96A33 483 aaKnown RBP9.31□□□□□ -0.92
RAB5B-210ENST00000553116 RMND1Q9NWS8 449 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 IFNKQ9P0W0 207 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 FZD1Q9UP38 647 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 MEIS2O14770 477 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 DDNO94850 711 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-210ENST00000553116 FOSP01100 380 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-210ENST00000553116 ARHGAP4P98171 946 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 PRR16Q569H4 304 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 MCTP2Q6DN12 878 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 SH3RF1Q7Z6J0 888 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 FILIP1Q7Z7B0 1213 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 CPXCR1Q8N123 301 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 GJA10Q969M2 543 aa9.31□□□□□ -0.92
RAB5B-210ENST00000553116 POLR2AP24928 1970 aaKnown RBP9.3□□□□□ -0.92
RAB5B-210ENST00000553116 WDR46O15213 610 aaKnown RBP9.3□□□□□ -0.92
RAB5B-210ENST00000553116 FLOT1O75955 427 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 TPM3P06753 285 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 PTGS1P23219 599 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 SARSP49591 514 aaKnown RBP9.3□□□□□ -0.92
RAB5B-210ENST00000553116 STX17P56962 302 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 MAP3K10Q02779 954 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 DGKZQ13574 1117 aa9.3□□□□□ -0.92
RAB5B-210ENST00000553116 CCDC186Q7Z3E2 898 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms