RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, human

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM116-216	ENST00000552800	CCDC194	A0A1B0GVG4	234 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	EGFR	P00533	1210 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	FOS	P01100	380 aa	Predicted RBP	11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	MYL1	P05976	194 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	GCFC2	P16383	781 aa	Known RBP	11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	CIITA	P33076	1130 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	PBX2	P40425	430 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	RASSF7	Q02833	373 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	AP3B2	Q13367	1082 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	IQCB1	Q15051	598 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	IL17A	Q16552	155 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	KIF4B	Q2VIQ3	1234 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	LONRF3	Q496Y0	759 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	NOM1	Q5C9Z4	860 aa	Known RBP	11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	NOL9	Q5SY16	702 aa	Known RBP	11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	DCAF15	Q66K64	600 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	SASS6	Q6UVJ0	657 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	HEATR3	Q7Z4Q2	680 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	NEK8	Q86SG6	692 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	REXO1	Q8N1G1	1221 aa	Known RBP	11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	KCTD17	Q8N5Z5	321 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	C12orf42	Q96LP6	360 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	CLIC6	Q96NY7	704 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	SDF4	Q9BRK5	362 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	AMN	Q9BXJ7	453 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	CSRNP2	Q9H175	543 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	RANBP17	Q9H2T7	1088 aa	Known RBP	11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	HACL1	Q9UJ83	578 aa		11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	HOOK1	Q9UJC3	728 aa	Known RBP	11.17	□□□□□ -0.62
TMEM116-216	ENST00000552800	ZNF541	Q9H0D2	1346 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	FAM196B	A6NMK8	535 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	USP17L10	C9JJH3	530 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	MEIS2	O14770	477 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	ACTN4	O43707	911 aa	Known RBP	11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	GDF11	O95390	407 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	CYP3A4	P08684	503 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	SLFN14	P0C7P3	912 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	HOXA7	P31268	230 aa	Predicted RBP	11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	CAMK4	Q16566	473 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	TSR1	Q2NL82	804 aa	Known RBP	11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	QRICH1	Q2TAL8	776 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	SYDE2	Q5VT97	1194 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	CLEC10A	Q8IUN9	316 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	IGSF22	Q8N9C0	903 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	ZC3H15	Q8WU90	426 aa	Known RBP	11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	CUL5	Q93034	780 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	CCDC34	Q96HJ3	373 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	CPVL	Q9H3G5	476 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	GPCPD1	Q9NPB8	672 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	FEM1B	Q9UK73	627 aa		11.16	□□□□□ -0.62
TMEM116-216	ENST00000552800	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	ATAD5	Q96QE3	1844 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	SHTN1	A0MZ66	631 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	TBX3	O15119	743 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	ADCY7	P51828	1080 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	STAT2	P52630	851 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	HIRA	P54198	1017 aa	Predicted RBP	11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	NLRP12	P59046	1061 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	GRIN1	Q05586	938 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	ZNF174	Q15697	407 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	STX1A	Q16623	288 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	SARM1	Q6SZW1	724 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	DTHD1	Q6ZMT9	781 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	KCTD1	Q719H9	257 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	RASGRP2	Q7LDG7	609 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	SAMD7	Q7Z3H4	446 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	ACER1	Q8TDN7	264 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	ZNF341	Q9BYN7	854 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	CUEDC2	Q9H467	287 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	PSTPIP2	Q9H939	334 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	VEZT	Q9HBM0	779 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	VAT1L	Q9HCJ6	419 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	PRR12	Q9ULL5	1215 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	ADAMTS5	Q9UNA0	930 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	PCDHA1	Q9Y5I3	950 aa		11.15	□□□□□ -0.62
TMEM116-216	ENST00000552800	UNCX	A6NJT0	531 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	C19orf81	C9J6K1	198 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	IKBKB	O14920	756 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	WDR46	O15213	610 aa	Known RBP	11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	ECE1	P42892	770 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	ZNF165	P49910	485 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	USP14	P54578	494 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	CDC37	Q16543	378 aa	Predicted RBP	11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	KIAA1755	Q5JYT7	1200 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	CNNM4	Q6P4Q7	775 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	ARHGAP27	Q6ZUM4	889 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	FBXO11	Q86XK2	927 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	IQUB	Q8NA54	791 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	TBCK	Q8TEA7	893 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	ANP32B	Q92688	251 aa	Known RBP	11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	COA7	Q96BR5	231 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	KLRG1	Q96E93	195 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	GSDMA	Q96QA5	445 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	PANK2	Q9BZ23	570 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	NAT10	Q9H0A0	1025 aa	Known RBP	11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	MAGEF1	Q9HAY2	307 aa		11.14	□□□□□ -0.63
TMEM116-216	ENST00000552800	CDHR5	Q9HBB8	845 aa		11.14	□□□□□ -0.63

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