RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 ZNF296Q8WUU4 475 aaPredicted RBP6.36□□□□□ -1.39
USP44-207ENST00000552237 PEX11GQ96HA9 241 aa6.36□□□□□ -1.39
USP44-207ENST00000552237 NOX5Q96PH1 765 aa6.36□□□□□ -1.39
USP44-207ENST00000552237 SLC9A7Q96T83 725 aa6.36□□□□□ -1.39
USP44-207ENST00000552237 SRRTQ9BXP5 876 aaKnown RBP6.36□□□□□ -1.39
USP44-207ENST00000552237 COPRSQ9NQ92 184 aa6.36□□□□□ -1.39
USP44-207ENST00000552237 KCNQ5Q9NR82 932 aa6.36□□□□□ -1.39
USP44-207ENST00000552237 SF3B6Q9Y3B4 125 aaKnown RBP6.36□□□□□ -1.39
USP44-207ENST00000552237 MEIS3P2A8K0S8 358 aa6.35□□□□□ -1.39
USP44-207ENST00000552237 C9IYK1 514 aa6.35□□□□□ -1.39
USP44-207ENST00000552237 GREM1O60565 184 aa6.35□□□□□ -1.39
USP44-207ENST00000552237 CD3EP07766 207 aa6.35□□□□□ -1.39
USP44-207ENST00000552237 GLI4P10075 376 aa6.35□□□□□ -1.39
USP44-207ENST00000552237 TRIM26Q12899 539 aaPredicted RBP6.35□□□□□ -1.39
USP44-207ENST00000552237 SLC9A5Q14940 896 aa6.35□□□□□ -1.39
USP44-207ENST00000552237 RGL3Q3MIN7 710 aa6.35□□□□□ -1.39
USP44-207ENST00000552237 TDRD10Q5VZ19 366 aaKnown RBP6.35□□□□□ -1.39
USP44-207ENST00000552237 ERMP1Q7Z2K6 904 aa6.35□□□□□ -1.39
USP44-207ENST00000552237 LGI4Q8N135 537 aa6.35□□□□□ -1.39
USP44-207ENST00000552237 BRF1Q92994 677 aa6.35□□□□□ -1.39
USP44-207ENST00000552237 SPATA6Q9NWH7 488 aaPredicted RBP6.35□□□□□ -1.39
USP44-207ENST00000552237 UBP1Q9NZI7 540 aa6.35□□□□□ -1.39
USP44-207ENST00000552237 ST6GALNAC2Q9UJ37 374 aa6.35□□□□□ -1.39
USP44-207ENST00000552237 SHOXO15266 292 aa6.34□□□□□ -1.39
USP44-207ENST00000552237 CYP2C8P10632 490 aa6.34□□□□□ -1.39
USP44-207ENST00000552237 CACNB2Q08289 660 aaPredicted RBP6.34□□□□□ -1.39
USP44-207ENST00000552237 ZFPM1Q8IX07 1006 aa6.34□□□□□ -1.39
USP44-207ENST00000552237 FIBCD1Q8N539 461 aa6.34□□□□□ -1.39
USP44-207ENST00000552237 NLGN2Q8NFZ4 835 aa6.34□□□□□ -1.39
USP44-207ENST00000552237 CPA5Q8WXQ8 436 aa6.34□□□□□ -1.39
USP44-207ENST00000552237 SMARCC1Q92922 1105 aaPredicted RBP6.34□□□□□ -1.39
USP44-207ENST00000552237 FCRL3Q96P31 734 aaPredicted RBP6.34□□□□□ -1.39
USP44-207ENST00000552237 MENTQ9BUN1 341 aa6.34□□□□□ -1.39
USP44-207ENST00000552237 INVSQ9Y283 1065 aa6.34□□□□□ -1.39
USP44-207ENST00000552237 CYR61O00622 381 aa6.33□□□□□ -1.4
USP44-207ENST00000552237 IFNGR1P15260 489 aa6.33□□□□□ -1.4
USP44-207ENST00000552237 POU4F1Q01851 419 aa6.33□□□□□ -1.4
USP44-207ENST00000552237 CCDC27Q2M243 656 aa6.33□□□□□ -1.4
USP44-207ENST00000552237 DCAF15Q66K64 600 aa6.33□□□□□ -1.4
USP44-207ENST00000552237 SPRED1Q7Z699 444 aa6.33□□□□□ -1.4
USP44-207ENST00000552237 LZTR1Q8N653 840 aa6.33□□□□□ -1.4
USP44-207ENST00000552237 DDX11Q96FC9 970 aa6.33□□□□□ -1.4
USP44-207ENST00000552237 GP6Q9HCN6 339 aa6.33□□□□□ -1.4
USP44-207ENST00000552237 RWDD3Q9Y3V2 267 aa6.33□□□□□ -1.4
USP44-207ENST00000552237 FHOD1Q9Y613 1164 aa6.33□□□□□ -1.4
USP44-207ENST00000552237 ZBTB7AO95365 584 aa6.32□□□□□ -1.4
USP44-207ENST00000552237 PMS1P54277 932 aaKnown RBP6.32□□□□□ -1.4
USP44-207ENST00000552237 ZNF445P59923 1031 aa6.32□□□□□ -1.4
USP44-207ENST00000552237 NETO2Q8NC67 525 aa6.32□□□□□ -1.4
USP44-207ENST00000552237 USP33Q8TEY7 942 aa6.32□□□□□ -1.4
USP44-207ENST00000552237 NKD1Q969G9 470 aa6.32□□□□□ -1.4
USP44-207ENST00000552237 ZDHHC15Q96MV8 337 aa6.32□□□□□ -1.4
USP44-207ENST00000552237 SLITRK6Q9H5Y7 841 aa6.32□□□□□ -1.4
USP44-207ENST00000552237 NOL6Q9H6R4 1146 aaKnown RBP6.32□□□□□ -1.4
USP44-207ENST00000552237 FAM86C1Q9NVL1 165 aa6.32□□□□□ -1.4
USP44-207ENST00000552237 SLPIP03973 132 aa6.31□□□□□ -1.4
USP44-207ENST00000552237 ITGA4P13612 1032 aa6.31□□□□□ -1.4
USP44-207ENST00000552237 MROH6A6NGR9 719 aa6.3□□□□□ -1.4
USP44-207ENST00000552237 FZD7O75084 574 aa6.3□□□□□ -1.4
USP44-207ENST00000552237 TP53P04637 393 aaPredicted RBP6.3□□□□□ -1.4
USP44-207ENST00000552237 CD247P20963 164 aa6.3□□□□□ -1.4
USP44-207ENST00000552237 FAM26FQ5R3K3 315 aa6.3□□□□□ -1.4
USP44-207ENST00000552237 CDK5RAP1Q96SZ6 601 aaKnown RBP6.3□□□□□ -1.4
USP44-207ENST00000552237 GGT7Q9UJ14 662 aa6.3□□□□□ -1.4
USP44-207ENST00000552237 TSC22D4Q9Y3Q8 395 aa6.3□□□□□ -1.4
USP44-207ENST00000552237 RPL13P26373 211 aaKnown RBP6.29□□□□□ -1.4
USP44-207ENST00000552237 THBS2P35442 1172 aa6.29□□□□□ -1.4
USP44-207ENST00000552237 KRTAP1-1Q07627 177 aa6.29□□□□□ -1.4
USP44-207ENST00000552237 ANKRD39Q53RE8 183 aa6.29□□□□□ -1.4
USP44-207ENST00000552237 AXDND1Q5T1B0 1012 aaPredicted RBP6.29□□□□□ -1.4
USP44-207ENST00000552237 TMCO4Q5TGY1 634 aa6.29□□□□□ -1.4
USP44-207ENST00000552237 EEF1DP3Q658K8 133 aa6.29□□□□□ -1.4
USP44-207ENST00000552237 INTS3Q68E01 1043 aaKnown RBP6.29□□□□□ -1.4
USP44-207ENST00000552237 MCTP2Q6DN12 878 aa6.29□□□□□ -1.4
USP44-207ENST00000552237 HS2ST1Q7LGA3 356 aa6.29□□□□□ -1.4
USP44-207ENST00000552237 LIMS2Q7Z4I7 341 aa6.29□□□□□ -1.4
USP44-207ENST00000552237 LINC00482Q8N8I6 264 aa6.29□□□□□ -1.4
USP44-207ENST00000552237 RNF34Q969K3 372 aa6.29□□□□□ -1.4
USP44-207ENST00000552237 VPS11Q9H270 941 aa6.29□□□□□ -1.4
USP44-207ENST00000552237 PCDH18Q9HCL0 1135 aa6.29□□□□□ -1.4
USP44-207ENST00000552237 ADAMTS1Q9UHI8 967 aa6.29□□□□□ -1.4
USP44-207ENST00000552237 PPP2R5DQ14738 602 aa6.28□□□□□ -1.4
USP44-207ENST00000552237 TCEAL1Q15170 157 aa6.28□□□□□ -1.4
USP44-207ENST00000552237 CRB2Q5IJ48 1285 aa6.28□□□□□ -1.4
USP44-207ENST00000552237 WWC2Q6AWC2 1192 aa6.28□□□□□ -1.4
USP44-207ENST00000552237 RCSD1Q6JBY9 416 aa6.28□□□□□ -1.4
USP44-207ENST00000552237 CRIP3Q6Q6R5 217 aa6.28□□□□□ -1.4
USP44-207ENST00000552237 PPFIBP1Q86W92 1011 aa6.28□□□□□ -1.4
USP44-207ENST00000552237 GORASP1Q9BQQ3 440 aa6.28□□□□□ -1.4
USP44-207ENST00000552237 ZNF451Q9Y4E5 1061 aa6.28□□□□□ -1.4
USP44-207ENST00000552237 C8BP07358 591 aa6.27□□□□□ -1.41
USP44-207ENST00000552237 ACRP10323 421 aa6.27□□□□□ -1.41
USP44-207ENST00000552237 ACVRL1P37023 503 aa6.27□□□□□ -1.41
USP44-207ENST00000552237 SURF1Q15526 300 aa6.27□□□□□ -1.41
USP44-207ENST00000552237 DNAJC14Q6Y2X3 702 aaPredicted RBP6.27□□□□□ -1.41
USP44-207ENST00000552237 ETV3LQ6ZN32 361 aa6.27□□□□□ -1.41
USP44-207ENST00000552237 FBXO33Q7Z6M2 555 aa6.27□□□□□ -1.41
USP44-207ENST00000552237 PLEKHH3Q7Z736 793 aa6.27□□□□□ -1.41
USP44-207ENST00000552237 Q8N1X5 172 aa6.27□□□□□ -1.41
USP44-207ENST00000552237 C11orf84Q9BUA3 381 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms