RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 OTUD7AQ8TE49 926 aaPredicted RBP25.65■■□□□ 1.7
SMARCD1-212ENST00000551966 TSPY2A6NKD2 308 aa25.64■■□□□ 1.7
SMARCD1-212ENST00000551966 ICAM1P05362 532 aa25.64■■□□□ 1.7
SMARCD1-212ENST00000551966 PPP2R2DQ66LE6 453 aa25.64■■□□□ 1.7
SMARCD1-212ENST00000551966 MTMR7Q9Y216 660 aa25.64■■□□□ 1.7
SMARCD1-212ENST00000551966 TTC41PQ6P2S7 1318 aa25.63■■□□□ 1.69
SMARCD1-212ENST00000551966 ZBBXA8MT70 800 aa25.63■■□□□ 1.69
SMARCD1-212ENST00000551966 BMP1P13497 986 aa25.63■■□□□ 1.69
SMARCD1-212ENST00000551966 ATP2A2P16615 1042 aaKnown RBP25.63■■□□□ 1.69
SMARCD1-212ENST00000551966 PURAQ00577 322 aaKnown RBP25.63■■□□□ 1.69
SMARCD1-212ENST00000551966 PPP4R3BQ5MIZ7 849 aa25.63■■□□□ 1.69
SMARCD1-212ENST00000551966 WDR11Q9BZH6 1224 aa25.63■■□□□ 1.69
SMARCD1-212ENST00000551966 RANBP17Q9H2T7 1088 aaKnown RBP25.63■■□□□ 1.69
SMARCD1-212ENST00000551966 RBM47A0AV96 593 aaKnown RBP25.62■■□□□ 1.69
SMARCD1-212ENST00000551966 RFXAPO00287 272 aa25.62■■□□□ 1.69
SMARCD1-212ENST00000551966 SLC16A2P36021 539 aa25.62■■□□□ 1.69
SMARCD1-212ENST00000551966 ALDH5A1P51649 535 aaPredicted RBP25.62■■□□□ 1.69
SMARCD1-212ENST00000551966 NECAB3Q96P71 396 aaPredicted RBP25.62■■□□□ 1.69
SMARCD1-212ENST00000551966 FSD1Q9BTV5 496 aa25.62■■□□□ 1.69
SMARCD1-212ENST00000551966 NFIBO00712 420 aa25.61■■□□□ 1.69
SMARCD1-212ENST00000551966 TFF2Q03403 129 aa25.61■■□□□ 1.69
SMARCD1-212ENST00000551966 BTNL9Q6UXG8 535 aa25.61■■□□□ 1.69
SMARCD1-212ENST00000551966 DEFB128Q7Z7B8 93 aa25.61■■□□□ 1.69
SMARCD1-212ENST00000551966 PPP1R13LQ8WUF5 828 aa25.61■■□□□ 1.69
SMARCD1-212ENST00000551966 POLR3EQ9NVU0 708 aa25.61■■□□□ 1.69
SMARCD1-212ENST00000551966 REV3LO60673 3130 aa25.61■■□□□ 1.69
SMARCD1-212ENST00000551966 TNKSO95271 1327 aa25.61■■□□□ 1.69
SMARCD1-212ENST00000551966 MYL3P08590 195 aa25.6■■□□□ 1.69
SMARCD1-212ENST00000551966 SUPT20HL2P0C7V6 817 aa25.6■■□□□ 1.69
SMARCD1-212ENST00000551966 DIEXFQ68CQ4 756 aaKnown RBP25.6■■□□□ 1.69
SMARCD1-212ENST00000551966 MICALL1Q8N3F8 863 aa25.6■■□□□ 1.69
SMARCD1-212ENST00000551966 DCAF4Q8WV16 495 aa25.6■■□□□ 1.69
SMARCD1-212ENST00000551966 ANAPC4Q9UJX5 808 aa25.6■■□□□ 1.69
SMARCD1-212ENST00000551966 ERC2O15083 957 aa25.59■■□□□ 1.69
SMARCD1-212ENST00000551966 RANBP6O60518 1105 aaKnown RBP25.59■■□□□ 1.69
SMARCD1-212ENST00000551966 FGRP09769 529 aa25.59■■□□□ 1.69
SMARCD1-212ENST00000551966 CCDC96Q2M329 555 aa25.59■■□□□ 1.69
SMARCD1-212ENST00000551966 VPS53Q5VIR6 699 aa25.59■■□□□ 1.69
SMARCD1-212ENST00000551966 ADD3Q9UEY8 706 aaKnown RBP25.59■■□□□ 1.69
SMARCD1-212ENST00000551966 TCF20Q9UGU0 1960 aaKnown RBP25.58■■□□□ 1.69
SMARCD1-212ENST00000551966 SCN5AQ14524 2016 aa25.58■■□□□ 1.69
SMARCD1-212ENST00000551966 CA3P07451 260 aa25.58■■□□□ 1.69
SMARCD1-212ENST00000551966 PFKMP08237 780 aa25.58■■□□□ 1.69
SMARCD1-212ENST00000551966 POU3F3P20264 500 aaPredicted RBP25.58■■□□□ 1.69
SMARCD1-212ENST00000551966 NBPF20Q3BBV1 942 aa25.58■■□□□ 1.69
SMARCD1-212ENST00000551966 TMEM67Q5HYA8 995 aa25.58■■□□□ 1.69
SMARCD1-212ENST00000551966 CLEC4DQ8WXI8 215 aa25.58■■□□□ 1.69
SMARCD1-212ENST00000551966 MTG1Q9BT17 334 aaPredicted RBP25.58■■□□□ 1.69
SMARCD1-212ENST00000551966 TSPYL2Q9H2G4 693 aaPredicted RBP25.58■■□□□ 1.69
SMARCD1-212ENST00000551966 CERS4Q9HA82 394 aa25.58■■□□□ 1.69
SMARCD1-212ENST00000551966 MTCH2Q9Y6C9 303 aa25.58■■□□□ 1.69
SMARCD1-212ENST00000551966 EPOPA6NHQ4 379 aa25.57■■□□□ 1.68
SMARCD1-212ENST00000551966 ORC4O43929 436 aa25.57■■□□□ 1.68
SMARCD1-212ENST00000551966 CPT1AP50416 773 aa25.57■■□□□ 1.68
SMARCD1-212ENST00000551966 SYDE2Q5VT97 1194 aa25.57■■□□□ 1.68
SMARCD1-212ENST00000551966 SLC30A10Q6XR72 485 aa25.57■■□□□ 1.68
SMARCD1-212ENST00000551966 IL27Q8NEV9 243 aa25.57■■□□□ 1.68
SMARCD1-212ENST00000551966 OR6J1Q8NGC5 347 aa25.57■■□□□ 1.68
SMARCD1-212ENST00000551966 GPCPD1Q9NPB8 672 aa25.57■■□□□ 1.68
SMARCD1-212ENST00000551966 PCDHB15Q9Y5E8 787 aa25.57■■□□□ 1.68
SMARCD1-212ENST00000551966 LOC102724159A0A0B4J2E5 919 aa25.56■■□□□ 1.68
SMARCD1-212ENST00000551966 PTPDC1A2A3K4 754 aa25.56■■□□□ 1.68
SMARCD1-212ENST00000551966 ARHGEF15O94989 841 aa25.56■■□□□ 1.68
SMARCD1-212ENST00000551966 KCNQ1P51787 676 aa25.56■■□□□ 1.68
SMARCD1-212ENST00000551966 PWP2Q15269 919 aaKnown RBP25.56■■□□□ 1.68
SMARCD1-212ENST00000551966 COPS5Q92905 334 aa25.56■■□□□ 1.68
SMARCD1-212ENST00000551966 TMEM47Q9BQJ4 181 aa25.56■■□□□ 1.68
SMARCD1-212ENST00000551966 FRMPD2Q68DX3 1309 aaPredicted RBP25.56■■□□□ 1.68
SMARCD1-212ENST00000551966 IQCF3P0C7M6 154 aa25.55■■□□□ 1.68
SMARCD1-212ENST00000551966 CALML3P27482 149 aa25.55■■□□□ 1.68
SMARCD1-212ENST00000551966 KRT40Q6A162 431 aa25.55■■□□□ 1.68
SMARCD1-212ENST00000551966 GPHNQ9NQX3 736 aaPredicted RBP25.55■■□□□ 1.68
SMARCD1-212ENST00000551966 FAM47CQ5HY64 1035 aa25.54■■□□□ 1.68
SMARCD1-212ENST00000551966 A6NJR5 290 aa25.53■■□□□ 1.68
SMARCD1-212ENST00000551966 TOP1P11387 765 aaKnown RBP25.53■■□□□ 1.68
SMARCD1-212ENST00000551966 MX1P20591 662 aa25.53■■□□□ 1.68
SMARCD1-212ENST00000551966 EDNRBP24530 442 aa25.53■■□□□ 1.68
SMARCD1-212ENST00000551966 ALX1Q15699 326 aa25.53■■□□□ 1.68
SMARCD1-212ENST00000551966 RNF207Q6ZRF8 634 aa25.53■■□□□ 1.68
SMARCD1-212ENST00000551966 PHOSPHO2Q8TCD6 241 aa25.53■■□□□ 1.68
SMARCD1-212ENST00000551966 TCP11L1Q9NUJ3 509 aa25.53■■□□□ 1.68
SMARCD1-212ENST00000551966 SALL3Q9BXA9 1300 aa25.53■■□□□ 1.68
SMARCD1-212ENST00000551966 XIRP2A4UGR9 3374 aa25.53■■□□□ 1.68
SMARCD1-212ENST00000551966 SCN10AQ9Y5Y9 1956 aa25.53■■□□□ 1.68
SMARCD1-212ENST00000551966 ACTN1P12814 892 aa25.52■■□□□ 1.68
SMARCD1-212ENST00000551966 RFC2P35250 354 aa25.52■■□□□ 1.68
SMARCD1-212ENST00000551966 RPS6P62753 249 aaKnown RBP25.52■■□□□ 1.68
SMARCD1-212ENST00000551966 TAP1Q03518 808 aa25.52■■□□□ 1.68
SMARCD1-212ENST00000551966 SKIV2LQ15477 1246 aaKnown RBP25.52■■□□□ 1.68
SMARCD1-212ENST00000551966 NFRKBQ6P4R8 1299 aa25.52■■□□□ 1.68
SMARCD1-212ENST00000551966 SLC9A7Q96T83 725 aa25.52■■□□□ 1.68
SMARCD1-212ENST00000551966 PITPNM1O00562 1244 aa25.51■■□□□ 1.67
SMARCD1-212ENST00000551966 NKRFO15226 690 aaKnown RBP eCLIP25.51■■□□□ 1.67
SMARCD1-212ENST00000551966 FGAP02671 866 aa25.51■■□□□ 1.67
SMARCD1-212ENST00000551966 PDHBP11177 359 aa25.51■■□□□ 1.67
SMARCD1-212ENST00000551966 PDE4DQ08499 809 aa25.51■■□□□ 1.67
SMARCD1-212ENST00000551966 AAK1Q2M2I8 961 aa25.51■■□□□ 1.67
SMARCD1-212ENST00000551966 HERC6Q8IVU3 1022 aa25.51■■□□□ 1.67
SMARCD1-212ENST00000551966 RETREG2Q8NC44 543 aa25.51■■□□□ 1.67
SMARCD1-212ENST00000551966 PRRC2BQ5JSZ5 2229 aaKnown RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms