RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 TMEM232C9JQI7 657 aa18.22■□□□□ 0.51
CACNB3-220ENST00000551716 PARNO95453 639 aaKnown RBP18.22■□□□□ 0.51
CACNB3-220ENST00000551716 MYL3P08590 195 aa18.22■□□□□ 0.51
CACNB3-220ENST00000551716 NHLH1Q02575 133 aa18.22■□□□□ 0.51
CACNB3-220ENST00000551716 SLFNL1Q499Z3 407 aa18.22■□□□□ 0.51
CACNB3-220ENST00000551716 FBXO16Q8IX29 292 aaPredicted RBP18.22■□□□□ 0.51
CACNB3-220ENST00000551716 CCDC155Q8N6L0 562 aa18.22■□□□□ 0.51
CACNB3-220ENST00000551716 STAG1Q8WVM7 1258 aa18.22■□□□□ 0.51
CACNB3-220ENST00000551716 HAUS7Q99871 368 aa18.22■□□□□ 0.51
CACNB3-220ENST00000551716 WDR11Q9BZH6 1224 aa18.22■□□□□ 0.51
CACNB3-220ENST00000551716 BOLA2Q9H3K6 86 aa18.22■□□□□ 0.51
CACNB3-220ENST00000551716 CYP39A1Q9NYL5 469 aa18.22■□□□□ 0.51
CACNB3-220ENST00000551716 NOD1Q9Y239 953 aa18.22■□□□□ 0.51
CACNB3-220ENST00000551716 ZNF536O15090 1300 aa18.22■□□□□ 0.51
CACNB3-220ENST00000551716 RAD50Q92878 1312 aa18.22■□□□□ 0.51
CACNB3-220ENST00000551716 MINDY4BA8MYZ0 360 aa18.21■□□□□ 0.51
CACNB3-220ENST00000551716 PLA2G6O60733 806 aa18.21■□□□□ 0.51
CACNB3-220ENST00000551716 ARHGEF15O94989 841 aa18.21■□□□□ 0.51
CACNB3-220ENST00000551716 ALAS1P13196 640 aa18.21■□□□□ 0.51
CACNB3-220ENST00000551716 IKQ13123 557 aaPredicted RBP18.21■□□□□ 0.51
CACNB3-220ENST00000551716 NBPF20Q3BBV1 942 aa18.21■□□□□ 0.51
CACNB3-220ENST00000551716 PPP4R3BQ5MIZ7 849 aa18.21■□□□□ 0.51
CACNB3-220ENST00000551716 CEP95Q96GE4 821 aa18.21■□□□□ 0.51
CACNB3-220ENST00000551716 TGS1Q96RS0 853 aaKnown RBP18.21■□□□□ 0.51
CACNB3-220ENST00000551716 RAD9AQ99638 391 aa18.21■□□□□ 0.51
CACNB3-220ENST00000551716 ISY1Q9ULR0 285 aaKnown RBP18.21■□□□□ 0.51
CACNB3-220ENST00000551716 MCM3APO60318 1980 aa18.21■□□□□ 0.5
CACNB3-220ENST00000551716 KCNA5P22460 613 aa18.2■□□□□ 0.5
CACNB3-220ENST00000551716 ERVK-21P61565 698 aa18.2■□□□□ 0.5
CACNB3-220ENST00000551716 GMCL1Q96IK5 515 aa18.2■□□□□ 0.5
CACNB3-220ENST00000551716 STRBPQ96SI9 672 aaKnown RBP18.2■□□□□ 0.5
CACNB3-220ENST00000551716 PUS7LQ9H0K6 701 aaKnown RBP18.2■□□□□ 0.5
CACNB3-220ENST00000551716 SUGCTQ9HAC7 445 aa18.2■□□□□ 0.5
CACNB3-220ENST00000551716 CTNNA3Q9UI47 895 aa18.2■□□□□ 0.5
CACNB3-220ENST00000551716 FAM50BQ9Y247 325 aa18.2■□□□□ 0.5
CACNB3-220ENST00000551716 NKRFO15226 690 aaKnown RBP eCLIP18.19■□□□□ 0.5
CACNB3-220ENST00000551716 DCXO43602 365 aa18.19■□□□□ 0.5
CACNB3-220ENST00000551716 EFCAB14O75071 495 aa18.19■□□□□ 0.5
CACNB3-220ENST00000551716 RAB11FIP3O75154 756 aa18.19■□□□□ 0.5
CACNB3-220ENST00000551716 PTGS1P23219 599 aa18.19■□□□□ 0.5
CACNB3-220ENST00000551716 PTCRAQ6ISU1 281 aaPredicted RBP18.19■□□□□ 0.5
CACNB3-220ENST00000551716 STK11IPQ8N1F8 1099 aa18.19■□□□□ 0.5
CACNB3-220ENST00000551716 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.19■□□□□ 0.5
CACNB3-220ENST00000551716 CAGE1Q8TC20 777 aa18.19■□□□□ 0.5
CACNB3-220ENST00000551716 AFAP1L1Q8TED9 768 aa18.19■□□□□ 0.5
CACNB3-220ENST00000551716 MPHOSPH6Q99547 160 aaKnown RBP18.19■□□□□ 0.5
CACNB3-220ENST00000551716 RBM47A0AV96 593 aaKnown RBP18.18■□□□□ 0.5
CACNB3-220ENST00000551716 GRXCR2A6NFK2 248 aa18.18■□□□□ 0.5
CACNB3-220ENST00000551716 GSG1L2A8MUP6 293 aa18.18■□□□□ 0.5
CACNB3-220ENST00000551716 HMMRO75330 724 aa18.18■□□□□ 0.5
CACNB3-220ENST00000551716 SLC1A4P43007 532 aa18.18■□□□□ 0.5
CACNB3-220ENST00000551716 WDR5P61964 334 aaKnown RBP18.18■□□□□ 0.5
CACNB3-220ENST00000551716 TMEM63BQ5T3F8 832 aa18.18■□□□□ 0.5
CACNB3-220ENST00000551716 LRRC47Q8N1G4 583 aaKnown RBP18.18■□□□□ 0.5
CACNB3-220ENST00000551716 OR6J1Q8NGC5 347 aa18.18■□□□□ 0.5
CACNB3-220ENST00000551716 GDPD5Q8WTR4 605 aa18.18■□□□□ 0.5
CACNB3-220ENST00000551716 FBXL18Q96ME1 805 aa18.18■□□□□ 0.5
CACNB3-220ENST00000551716 BAZ2AQ9UIF9 1905 aaKnown RBP18.17■□□□□ 0.5
CACNB3-220ENST00000551716 ABHD14A-ACY1A0A1B0GW23 586 aa18.17■□□□□ 0.5
CACNB3-220ENST00000551716 POTEB3A0JP26 581 aa18.17■□□□□ 0.5
CACNB3-220ENST00000551716 GJB5O95377 273 aa18.17■□□□□ 0.5
CACNB3-220ENST00000551716 TSPY3P0CV98 308 aa18.17■□□□□ 0.5
CACNB3-220ENST00000551716 TSPY8P0CW00 308 aa18.17■□□□□ 0.5
CACNB3-220ENST00000551716 POTEBQ6S5H4 581 aa18.17■□□□□ 0.5
CACNB3-220ENST00000551716 NSMFQ6X4W1 530 aa18.17■□□□□ 0.5
CACNB3-220ENST00000551716 NEDD1Q8NHV4 660 aa18.17■□□□□ 0.5
CACNB3-220ENST00000551716 CRBNQ96SW2 442 aa18.17■□□□□ 0.5
CACNB3-220ENST00000551716 BRWD1Q9NSI6 2320 aa18.17■□□□□ 0.5
CACNB3-220ENST00000551716 LCHNA4D1U4 455 aa18.16■□□□□ 0.5
CACNB3-220ENST00000551716 A6NJR5 290 aa18.16■□□□□ 0.5
CACNB3-220ENST00000551716 GNAT2P19087 354 aa18.16■□□□□ 0.5
CACNB3-220ENST00000551716 PTGISQ16647 500 aa18.16■□□□□ 0.5
CACNB3-220ENST00000551716 PTPROQ16827 1216 aa18.16■□□□□ 0.5
CACNB3-220ENST00000551716 RCSD1Q6JBY9 416 aa18.16■□□□□ 0.5
CACNB3-220ENST00000551716 CNKSR3Q6P9H4 555 aa18.16■□□□□ 0.5
CACNB3-220ENST00000551716 MFSD14AQ96MC6 490 aa18.16■□□□□ 0.5
CACNB3-220ENST00000551716 UPF3BQ9BZI7 483 aaKnown RBP18.16■□□□□ 0.5
CACNB3-220ENST00000551716 PRKAG3Q9UGI9 489 aa18.16■□□□□ 0.5
CACNB3-220ENST00000551716 CCPG1Q9ULG6 757 aa18.16■□□□□ 0.5
CACNB3-220ENST00000551716 SLC3A2P08195 630 aaKnown RBP18.15■□□□□ 0.5
CACNB3-220ENST00000551716 IL9P15248 144 aa18.15■□□□□ 0.5
CACNB3-220ENST00000551716 SELPP16109 830 aa18.15■□□□□ 0.5
CACNB3-220ENST00000551716 PDE4BQ07343 736 aa18.15■□□□□ 0.5
CACNB3-220ENST00000551716 MUM1L1Q5H9M0 696 aa18.15■□□□□ 0.5
CACNB3-220ENST00000551716 SPRED2Q7Z698 418 aa18.15■□□□□ 0.5
CACNB3-220ENST00000551716 BCL11AQ9H165 835 aa18.15■□□□□ 0.5
CACNB3-220ENST00000551716 MTUS1Q9ULD2 1270 aa18.15■□□□□ 0.5
CACNB3-220ENST00000551716 DDX49Q9Y6V7 483 aaKnown RBP18.15■□□□□ 0.5
CACNB3-220ENST00000551716 GREB1LQ9C091 1923 aaPredicted RBP18.15■□□□□ 0.5
CACNB3-220ENST00000551716 B4DLN1 442 aa18.14■□□□□ 0.49
CACNB3-220ENST00000551716 PRDM1O75626 825 aa18.14■□□□□ 0.49
CACNB3-220ENST00000551716 ICAM1P05362 532 aa18.14■□□□□ 0.49
CACNB3-220ENST00000551716 RLBP1P12271 317 aa18.14■□□□□ 0.49
CACNB3-220ENST00000551716 MCCP23508 829 aa18.14■□□□□ 0.49
CACNB3-220ENST00000551716 TDO2P48775 406 aa18.14■□□□□ 0.49
CACNB3-220ENST00000551716 ALDH5A1P51649 535 aaPredicted RBP18.14■□□□□ 0.49
CACNB3-220ENST00000551716 MRPL12P52815 198 aaKnown RBP18.14■□□□□ 0.49
CACNB3-220ENST00000551716 IKBKEQ14164 716 aa18.14■□□□□ 0.49
CACNB3-220ENST00000551716 PPP2R5BQ15173 497 aa18.14■□□□□ 0.49
CACNB3-220ENST00000551716 NEK9Q8TD19 979 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms