RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 FAM47CQ5HY64 1035 aa14.26□□□□□ -0.13
PTCH1-222ENST00000551425 HFE2Q6ZVN8 426 aa14.26□□□□□ -0.13
PTCH1-222ENST00000551425 MFSD14AQ96MC6 490 aa14.26□□□□□ -0.13
PTCH1-222ENST00000551425 TRERF1Q96PN7 1200 aa14.26□□□□□ -0.13
PTCH1-222ENST00000551425 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTCH1-222ENST00000551425 MKNK2Q9HBH9 465 aa14.26□□□□□ -0.13
PTCH1-222ENST00000551425 IL1RAPL2Q9NP60 686 aa14.26□□□□□ -0.13
PTCH1-222ENST00000551425 GPHNQ9NQX3 736 aaPredicted RBP14.26□□□□□ -0.13
PTCH1-222ENST00000551425 CYP39A1Q9NYL5 469 aa14.26□□□□□ -0.13
PTCH1-222ENST00000551425 PRKAG3Q9UGI9 489 aa14.26□□□□□ -0.13
PTCH1-222ENST00000551425 EXOC6BQ9Y2D4 811 aa14.26□□□□□ -0.13
PTCH1-222ENST00000551425 TANC1Q9C0D5 1861 aa14.25□□□□□ -0.13
PTCH1-222ENST00000551425 RBM47A0AV96 593 aaKnown RBP14.25□□□□□ -0.13
PTCH1-222ENST00000551425 LINC01553A4QN01 128 aa14.25□□□□□ -0.13
PTCH1-222ENST00000551425 C19orf67A6NJJ6 358 aa14.25□□□□□ -0.13
PTCH1-222ENST00000551425 ST18O60284 1047 aa14.25□□□□□ -0.13
PTCH1-222ENST00000551425 BMP3P12645 472 aa14.25□□□□□ -0.13
PTCH1-222ENST00000551425 ZP2Q05996 745 aa14.25□□□□□ -0.13
PTCH1-222ENST00000551425 GPNMBQ14956 572 aa14.25□□□□□ -0.13
PTCH1-222ENST00000551425 UBE3CQ15386 1083 aa14.25□□□□□ -0.13
PTCH1-222ENST00000551425 TMCO2Q7Z6W1 182 aaPredicted RBP14.25□□□□□ -0.13
PTCH1-222ENST00000551425 WDR11Q9BZH6 1224 aa14.25□□□□□ -0.13
PTCH1-222ENST00000551425 PAG1Q9NWQ8 432 aa14.25□□□□□ -0.13
PTCH1-222ENST00000551425 MTUS1Q9ULD2 1270 aa14.25□□□□□ -0.13
PTCH1-222ENST00000551425 ZNF318Q5VUA4 2279 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 LOC102724159A0A0B4J2E5 919 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 TMEM232C9JQI7 657 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 KPNA6O60684 536 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 STAT2P52630 851 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 DEFB103AP81534 67 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 PWP2Q15269 919 aaKnown RBP14.24□□□□□ -0.13
PTCH1-222ENST00000551425 BRDTQ58F21 947 aaPredicted RBP14.24□□□□□ -0.13
PTCH1-222ENST00000551425 HSP90AB4PQ58FF6 505 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 ZKSCAN2Q63HK3 967 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 CEP85Q6P2H3 762 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 FAM160B2Q86V87 743 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 CCDC155Q8N6L0 562 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 CAGE1Q8TC20 777 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 RHPN1Q8TCX5 695 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 AFAP1L1Q8TED9 768 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 CHURC1Q8WUH1 139 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 CEP95Q96GE4 821 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 PHOX2BQ99453 314 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 MTMR4Q9NYA4 1195 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 FAM50BQ9Y247 325 aa14.24□□□□□ -0.13
PTCH1-222ENST00000551425 ABHD14A-ACY1A0A1B0GW23 586 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 PARNO95453 639 aaKnown RBP14.23□□□□□ -0.13
PTCH1-222ENST00000551425 TTLL1O95922 423 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 CXCL10P02778 98 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 CHGBP05060 677 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 ALAS1P13196 640 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 COL19A1Q14993 1142 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 MUM1L1Q5H9M0 696 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 SLFN13Q68D06 897 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 CNKSR3Q6P9H4 555 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 GIMAP6Q6P9H5 292 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 ADHFE1Q8IWW8 467 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 CLASRPQ8N2M8 674 aaKnown RBP14.23□□□□□ -0.13
PTCH1-222ENST00000551425 OR6J1Q8NGC5 347 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 ANKS1AQ92625 1134 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 MRPL38Q96DV4 380 aaKnown RBP14.23□□□□□ -0.13
PTCH1-222ENST00000551425 UPF3BQ9BZI7 483 aaKnown RBP14.23□□□□□ -0.13
PTCH1-222ENST00000551425 CTNNA3Q9UI47 895 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 NOD1Q9Y239 953 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 SCN10AQ9Y5Y9 1956 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 PTPRSQ13332 1948 aa14.23□□□□□ -0.13
PTCH1-222ENST00000551425 RAD50Q92878 1312 aa14.22□□□□□ -0.13
PTCH1-222ENST00000551425 A6NJR5 290 aa14.22□□□□□ -0.13
PTCH1-222ENST00000551425 H3BQ06 376 aaPredicted RBP14.22□□□□□ -0.13
PTCH1-222ENST00000551425 PLA2G6O60733 806 aa14.22□□□□□ -0.13
PTCH1-222ENST00000551425 EFCAB14O75071 495 aa14.22□□□□□ -0.13
PTCH1-222ENST00000551425 RBL2Q08999 1139 aa14.22□□□□□ -0.13
PTCH1-222ENST00000551425 LRRC47Q8N1G4 583 aaKnown RBP14.22□□□□□ -0.13
PTCH1-222ENST00000551425 FBXO22Q8NEZ5 403 aa14.22□□□□□ -0.13
PTCH1-222ENST00000551425 TET1Q8NFU7 2136 aa14.22□□□□□ -0.13
PTCH1-222ENST00000551425 PPP1R13LQ8WUF5 828 aa14.22□□□□□ -0.13
PTCH1-222ENST00000551425 STAG1Q8WVM7 1258 aa14.22□□□□□ -0.13
PTCH1-222ENST00000551425 GMCL1Q96IK5 515 aa14.22□□□□□ -0.13
PTCH1-222ENST00000551425 CTAGE1Q96RT6 745 aa14.22□□□□□ -0.13
PTCH1-222ENST00000551425 PUS7LQ9H0K6 701 aaKnown RBP14.22□□□□□ -0.13
PTCH1-222ENST00000551425 ADD3Q9UEY8 706 aaKnown RBP14.22□□□□□ -0.13
PTCH1-222ENST00000551425 NKRFO15226 690 aaKnown RBP eCLIP14.21□□□□□ -0.13
PTCH1-222ENST00000551425 IFIT2P09913 472 aaKnown RBP14.21□□□□□ -0.13
PTCH1-222ENST00000551425 SELPP16109 830 aa14.21□□□□□ -0.13
PTCH1-222ENST00000551425 ALDH5A1P51649 535 aaPredicted RBP14.21□□□□□ -0.13
PTCH1-222ENST00000551425 FOXK2Q01167 660 aa14.21□□□□□ -0.13
PTCH1-222ENST00000551425 PTGISQ16647 500 aa14.21□□□□□ -0.13
PTCH1-222ENST00000551425 PTPROQ16827 1216 aa14.21□□□□□ -0.13
PTCH1-222ENST00000551425 TIGD5Q53EQ6 642 aa14.21□□□□□ -0.13
PTCH1-222ENST00000551425 NSMFQ6X4W1 530 aa14.21□□□□□ -0.13
PTCH1-222ENST00000551425 LRRC8DQ7L1W4 858 aa14.21□□□□□ -0.13
PTCH1-222ENST00000551425 ZNF444Q8N0Y2 327 aaPredicted RBP14.21□□□□□ -0.13
PTCH1-222ENST00000551425 STK11IPQ8N1F8 1099 aa14.21□□□□□ -0.13
PTCH1-222ENST00000551425 PABPC5Q96DU9 382 aaKnown RBP14.21□□□□□ -0.13
PTCH1-222ENST00000551425 PURBQ96QR8 312 aaKnown RBP14.21□□□□□ -0.13
PTCH1-222ENST00000551425 HAUS7Q99871 368 aa14.21□□□□□ -0.13
PTCH1-222ENST00000551425 BOLA2Q9H3K6 86 aa14.21□□□□□ -0.13
PTCH1-222ENST00000551425 ZNF287Q9HBT7 754 aa14.21□□□□□ -0.13
PTCH1-222ENST00000551425 TRIOO75962 3097 aa14.21□□□□□ -0.13
PTCH1-222ENST00000551425 ZNF316A6NFI3 1004 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms