RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 EEF1DP3Q658K8 133 aa5.25□□□□□ -1.57
SCAF11-215ENST00000551391 RCSD1Q6JBY9 416 aa5.25□□□□□ -1.57
SCAF11-215ENST00000551391 LILRB2Q8N423 598 aa5.25□□□□□ -1.57
SCAF11-215ENST00000551391 LINC01599Q8WXQ3 324 aa5.25□□□□□ -1.57
SCAF11-215ENST00000551391 COPS5Q92905 334 aa5.25□□□□□ -1.57
SCAF11-215ENST00000551391 PPP1R14AQ96A00 147 aa5.25□□□□□ -1.57
SCAF11-215ENST00000551391 INTS4Q96HW7 963 aaKnown RBP5.25□□□□□ -1.57
SCAF11-215ENST00000551391 C20orf173Q96LM9 149 aa5.25□□□□□ -1.57
SCAF11-215ENST00000551391 MCMBPQ9BTE3 642 aa5.25□□□□□ -1.57
SCAF11-215ENST00000551391 KDM2BQ8NHM5 1336 aa5.24□□□□□ -1.57
SCAF11-215ENST00000551391 C2orf71A6NGG8 1288 aa5.24□□□□□ -1.57
SCAF11-215ENST00000551391 FGF10O15520 208 aaPredicted RBP5.24□□□□□ -1.57
SCAF11-215ENST00000551391 CPP00450 1065 aa5.24□□□□□ -1.57
SCAF11-215ENST00000551391 CD3EP07766 207 aa5.24□□□□□ -1.57
SCAF11-215ENST00000551391 CHRNEQ04844 493 aa5.24□□□□□ -1.57
SCAF11-215ENST00000551391 DUSP4Q13115 394 aa5.24□□□□□ -1.57
SCAF11-215ENST00000551391 SNX17Q15036 470 aa5.24□□□□□ -1.57
SCAF11-215ENST00000551391 TMEM151BQ8IW70 566 aa5.24□□□□□ -1.57
SCAF11-215ENST00000551391 THAP3Q8WTV1 239 aaPredicted RBP5.24□□□□□ -1.57
SCAF11-215ENST00000551391 BTN2A2Q8WVV5 523 aa5.24□□□□□ -1.57
SCAF11-215ENST00000551391 FCRL2Q96LA5 508 aaPredicted RBP5.24□□□□□ -1.57
SCAF11-215ENST00000551391 AARSD1Q9BTE6 412 aaKnown RBP5.24□□□□□ -1.57
SCAF11-215ENST00000551391 G6PC3Q9BUM1 346 aa5.24□□□□□ -1.57
SCAF11-215ENST00000551391 LGR4Q9BXB1 951 aa5.24□□□□□ -1.57
SCAF11-215ENST00000551391 ZNF552Q9H707 407 aaPredicted RBP5.24□□□□□ -1.57
SCAF11-215ENST00000551391 ARHGEF4Q9NR80 690 aa5.24□□□□□ -1.57
SCAF11-215ENST00000551391 PFDN2Q9UHV9 154 aa5.24□□□□□ -1.57
SCAF11-215ENST00000551391 GPR160Q9UJ42 338 aa5.24□□□□□ -1.57
SCAF11-215ENST00000551391 GPR55Q9Y2T6 319 aaPredicted RBP5.24□□□□□ -1.57
SCAF11-215ENST00000551391 YBX2Q9Y2T7 364 aaKnown RBP5.24□□□□□ -1.57
SCAF11-215ENST00000551391 BACE2Q9Y5Z0 518 aa5.24□□□□□ -1.57
SCAF11-215ENST00000551391 TRAV20A0A0B4J274 112 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 CCDC163A0A0D9SF12 145 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 TEX51A0A1B0GUA7 166 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 TBX1O43435 398 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 GSTM1P09488 218 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 IFNGR1P15260 489 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 RPL10P27635 214 aaKnown RBP5.23□□□□□ -1.57
SCAF11-215ENST00000551391 KIR2DL1P43626 348 aaPredicted RBP5.23□□□□□ -1.57
SCAF11-215ENST00000551391 KIR2DL2P43627 348 aaPredicted RBP5.23□□□□□ -1.57
SCAF11-215ENST00000551391 GFRA1P56159 465 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 MAP4K2Q12851 820 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 NR0B2Q15466 257 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 TESK1Q15569 626 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 DPY19L1Q2PZI1 675 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 C2orf27AQ580R0 203 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 CYP2R1Q6VVX0 501 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 WAPLQ7Z5K2 1190 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 SCUBE1Q8IWY4 988 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 AP5S1Q9NUS5 200 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 TNFRSF10DQ9UBN6 386 aa5.23□□□□□ -1.57
SCAF11-215ENST00000551391 TRBV23OR9-2A0A075B6M9 112 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 MYOCOSA0A1B0GUC4 107 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 TLDC2A0PJX2 215 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 STXBP3O00186 592 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 FOXD2O60548 495 aaPredicted RBP5.22□□□□□ -1.57
SCAF11-215ENST00000551391 FKTNO75072 461 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 FAM153BP0C7A2 387 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 GRIA2P42262 883 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 SEPHS1P49903 392 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 RBM10P98175 930 aaKnown RBP5.22□□□□□ -1.57
SCAF11-215ENST00000551391 CYP4F3Q08477 520 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 SCRN1Q12765 414 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 SLC35F1Q5T1Q4 408 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 ANKS4BQ8N8V4 417 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 KREMEN2Q8NCW0 462 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 KCTD13Q8WZ19 329 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 MAP6Q96JE9 813 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 PTCHD1Q96NR3 888 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 CDADC1Q9BWV3 514 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 SP110Q9HB58 689 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 ERVK13-1Q9NX77 482 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 KCTD3Q9Y597 815 aa5.22□□□□□ -1.57
SCAF11-215ENST00000551391 FADS2P1A8MWK0 482 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 DLX3O60479 287 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 SASH1O94885 1247 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 TBC1D8O95759 1140 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 SNRPB2P08579 225 aaKnown RBP5.21□□□□□ -1.58
SCAF11-215ENST00000551391 PABPC1P11940 636 aaKnown RBP5.21□□□□□ -1.58
SCAF11-215ENST00000551391 SYN1P17600 705 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 CEBPAP49715 358 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-215ENST00000551391 NFIXQ14938 502 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 TIGD5Q53EQ6 642 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 ACBD5Q5T8D3 534 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-215ENST00000551391 HLA-DQA1Q5Y7H0 255 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 E4F1Q66K89 784 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-215ENST00000551391 IQCEQ6IPM2 695 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 GIMAP6Q6P9H5 292 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 NSMFQ6X4W1 530 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 ZPBP2Q6X784 338 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 TMEM52Q8NDY8 209 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 ZSWIM2Q8NEG5 633 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 NPLOC4Q8TAT6 608 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 KISS1RQ969F8 398 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-215ENST00000551391 OSBP2Q969R2 916 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 C1orf159Q96HA4 380 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 HHIPL1Q96JK4 782 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 RNPC3Q96LT9 517 aaKnown RBP5.21□□□□□ -1.58
SCAF11-215ENST00000551391 MMP19Q99542 508 aa5.21□□□□□ -1.58
SCAF11-215ENST00000551391 IER2Q9BTL4 223 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms