RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 NBPF9Q3BBW0 867 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 ZNF658Q5TYW1 1059 aaPredicted RBP12.98□□□□□ -0.33
RAB5C-208ENST00000551338 SPATA1Q5VX52 437 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 KLHL10Q6JEL2 608 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 ARMCX5Q6P1M9 558 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 VSTM4Q8IW00 320 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 CCDC150Q8NCX0 1101 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 RASSF8Q8NHQ8 419 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 ACER1Q8TDN7 264 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 PNMA5Q96PV4 448 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 AMNQ9BXJ7 453 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 PSTPIP2Q9H939 334 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 RMND1Q9NWS8 449 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 GDAQ9Y2T3 454 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 TMX2Q9Y320 296 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 COL11A1P12107 1806 aaPredicted RBP12.97□□□□□ -0.33
RAB5C-208ENST00000551338 WDR90Q96KV7 1748 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 USP17L15C9J2P7 530 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 USP17L13C9JLJ4 530 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 USP17L11C9JVI0 530 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 USP17L18D6R9N7 530 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 USP17L22D6RA61 530 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 USP17L17D6RBQ6 530 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 USP17L19D6RCP7 530 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 USP17L20D6RJB6 530 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 MEIS2O14770 477 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 MYL1P05976 194 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 GCFC2P16383 781 aaKnown RBP12.97□□□□□ -0.33
RAB5C-208ENST00000551338 TXKP42681 527 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 ZNF280AP59817 542 aaPredicted RBP12.97□□□□□ -0.33
RAB5C-208ENST00000551338 MAP3K10Q02779 954 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 USP17L24Q0WX57 530 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 TMEM266Q2M3C6 531 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 KMT5BQ4FZB7 885 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 HSP90AA4PQ58FG1 418 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 CDKAL1Q5VV42 579 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 USP17L6PQ6QN14 398 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 APTXQ7Z2E3 356 aaKnown RBP12.97□□□□□ -0.33
RAB5C-208ENST00000551338 FBXO11Q86XK2 927 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 MBOAT7Q96N66 472 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 P2RX7Q99572 595 aaKnown RBP12.97□□□□□ -0.33
RAB5C-208ENST00000551338 MYOZ2Q9NPC6 264 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.97□□□□□ -0.33
RAB5C-208ENST00000551338 PRR12Q9ULL5 1215 aa12.97□□□□□ -0.33
RAB5C-208ENST00000551338 LOXHD1Q8IVV2 1947 aa12.96□□□□□ -0.33
RAB5C-208ENST00000551338 POTEMA6NI47 508 aa12.96□□□□□ -0.33
RAB5C-208ENST00000551338 CAP2P40123 477 aa12.96□□□□□ -0.33
RAB5C-208ENST00000551338 PRELPP51888 382 aa12.96□□□□□ -0.33
RAB5C-208ENST00000551338 RASSF7Q02833 373 aa12.96□□□□□ -0.33
RAB5C-208ENST00000551338 AP3B2Q13367 1082 aa12.96□□□□□ -0.33
RAB5C-208ENST00000551338 CRYGNQ8WXF5 182 aa12.96□□□□□ -0.33
RAB5C-208ENST00000551338 JDP2Q8WYK2 163 aa12.96□□□□□ -0.33
RAB5C-208ENST00000551338 HAS1Q92839 578 aa12.96□□□□□ -0.33
RAB5C-208ENST00000551338 NAP1L4Q99733 375 aaKnown RBP12.96□□□□□ -0.33
RAB5C-208ENST00000551338 VCPKMTQ9H867 229 aa12.96□□□□□ -0.33
RAB5C-208ENST00000551338 BLOC1S4Q9NUP1 217 aa12.96□□□□□ -0.33
RAB5C-208ENST00000551338 DDX25Q9UHL0 483 aaKnown RBP12.96□□□□□ -0.33
RAB5C-208ENST00000551338 R3HCC1Q9Y3T6 440 aaKnown RBP12.96□□□□□ -0.33
RAB5C-208ENST00000551338 POLR2AP24928 1970 aaKnown RBP12.96□□□□□ -0.34
RAB5C-208ENST00000551338 RLFQ13129 1914 aa12.96□□□□□ -0.34
RAB5C-208ENST00000551338 A0A1B0GTH6 734 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 OPLAHO14841 1288 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 RHOBTB3O94955 611 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 RPS12P25398 132 aaKnown RBP12.95□□□□□ -0.34
RAB5C-208ENST00000551338 IKQ13123 557 aaPredicted RBP12.95□□□□□ -0.34
RAB5C-208ENST00000551338 PAK1Q13153 545 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 TBX2Q13207 712 aaPredicted RBP12.95□□□□□ -0.34
RAB5C-208ENST00000551338 SEMA3FQ13275 785 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 DHX8Q14562 1220 aaKnown RBP12.95□□□□□ -0.34
RAB5C-208ENST00000551338 TNIP1Q15025 636 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 R3HDM1Q15032 1099 aaKnown RBP12.95□□□□□ -0.34
RAB5C-208ENST00000551338 PTPN21Q16825 1174 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 USH1GQ495M9 461 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 TMEM119Q4V9L6 283 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 FAM83BQ5T0W9 1011 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 MOXD1Q6UVY6 613 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 SPICE1Q8N0Z3 855 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 NELFBQ8WX92 580 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 CALML4Q96GE6 196 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 C7orf25Q9BPX7 421 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 NUDT12Q9BQG2 462 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 TRIM9Q9C026 710 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 GOPCQ9HD26 462 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 STK17AQ9UEE5 414 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 LRWD1Q9UFC0 647 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 RWDD2AQ9UIY3 292 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 CD2APQ9Y5K6 639 aa12.95□□□□□ -0.34
RAB5C-208ENST00000551338 CYP3A7-CYP3A51PA0A087WV96 503 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 COBLO75128 1261 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 EGFRP00533 1210 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 SKILP12757 684 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 CDK11BP21127 795 aaKnown RBP12.94□□□□□ -0.34
RAB5C-208ENST00000551338 CYP3A7P24462 503 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 PRCPP42785 496 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 TERF1P54274 439 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 PDIA5Q14554 519 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 MCTP2Q6DN12 878 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 MIGA2Q7L4E1 593 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 CCDC84Q86UT8 332 aaPredicted RBP12.94□□□□□ -0.34
RAB5C-208ENST00000551338 ADSSL1Q8N142 457 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms