RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 FOXN1O15353 648 aa12.91□□□□□ -0.34
LGR5-206ENST00000550851 EIF2AK2P19525 551 aaKnown RBP12.91□□□□□ -0.34
LGR5-206ENST00000550851 DNM2P50570 870 aa12.91□□□□□ -0.34
LGR5-206ENST00000550851 PPARDQ03181 441 aa12.91□□□□□ -0.34
LGR5-206ENST00000550851 WDR44Q5JSH3 913 aa12.91□□□□□ -0.34
LGR5-206ENST00000550851 PAGE5Q96GU1 130 aa12.91□□□□□ -0.34
LGR5-206ENST00000550851 IFIH1Q9BYX4 1025 aaKnown RBP12.91□□□□□ -0.34
LGR5-206ENST00000550851 MLXIPQ9HAP2 919 aa12.91□□□□□ -0.34
LGR5-206ENST00000550851 TNNI1P19237 187 aa12.91□□□□□ -0.34
LGR5-206ENST00000550851 COPB1P53618 953 aaKnown RBP12.91□□□□□ -0.34
LGR5-206ENST00000550851 SMC1AQ14683 1233 aaKnown RBP12.91□□□□□ -0.34
LGR5-206ENST00000550851 TMEM179Q6ZVK1 233 aa12.91□□□□□ -0.34
LGR5-206ENST00000550851 SP8Q8IXZ3 490 aa12.91□□□□□ -0.34
LGR5-206ENST00000550851 HINFPQ9BQA5 517 aa12.91□□□□□ -0.34
LGR5-206ENST00000550851 ZNF577Q9BSK1 485 aa12.91□□□□□ -0.34
LGR5-206ENST00000550851 LSM14BQ9BX40 385 aaKnown RBP12.91□□□□□ -0.34
LGR5-206ENST00000550851 DAGLAQ9Y4D2 1042 aa12.91□□□□□ -0.34
LGR5-206ENST00000550851 SPATA31A6Q5VVP1 1343 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 PNMA6FA0A0J9YX94 578 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 K7ENM7 598 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 SPOPO43791 374 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 GNPTABQ3T906 1256 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 CNOT6LQ96LI5 555 aaKnown RBP12.9□□□□□ -0.34
LGR5-206ENST00000550851 TEKT3Q9BXF9 490 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 PSDA5PKW4 1024 aaPredicted RBP12.9□□□□□ -0.34
LGR5-206ENST00000550851 F5H6K3 240 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 ABCB4P21439 1286 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 ACTN2P35609 894 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 POLR2FP61218 127 aaKnown RBP12.9□□□□□ -0.34
LGR5-206ENST00000550851 KLRC3Q07444 240 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 UTP14CQ5TAP6 766 aaKnown RBP12.9□□□□□ -0.34
LGR5-206ENST00000550851 METTL13Q8N6R0 699 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 SECISBP2LQ93073 1101 aaKnown RBP12.9□□□□□ -0.34
LGR5-206ENST00000550851 ERO1AQ96HE7 468 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 GDAP1L1Q96MZ0 367 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 DNAI2Q9GZS0 605 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 COL4A3BPQ9Y5P4 624 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 FER1L4A9Z1Z3 1794 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 GBP2P32456 591 aaPredicted RBP12.9□□□□□ -0.34
LGR5-206ENST00000550851 SFMBT2Q5VUG0 894 aa12.9□□□□□ -0.34
LGR5-206ENST00000550851 FMR1NBQ8N0W7 255 aaPredicted RBP12.9□□□□□ -0.34
LGR5-206ENST00000550851 SALL3Q9BXA9 1300 aa12.9□□□□□ -0.35
LGR5-206ENST00000550851 SMIM23A6NLE4 172 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 DKC1O60832 514 aaKnown RBP eCLIP12.89□□□□□ -0.35
LGR5-206ENST00000550851 ERCC5P28715 1186 aaPredicted RBP12.89□□□□□ -0.35
LGR5-206ENST00000550851 MKRN3Q13064 507 aaKnown RBP12.89□□□□□ -0.35
LGR5-206ENST00000550851 C3orf67Q6ZVT6 689 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 CCDC25Q86WR0 208 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 ANO3Q9BYT9 981 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 PPP2R2CQ9Y2T4 447 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 TLDC2A0PJX2 215 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 WTIPA6NIX2 430 aaPredicted RBP12.89□□□□□ -0.35
LGR5-206ENST00000550851 CLIC2O15247 247 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 DLATP10515 647 aaKnown RBP12.89□□□□□ -0.35
LGR5-206ENST00000550851 FAM83BQ5T0W9 1011 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 TTBK2Q6IQ55 1244 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 FBXO33Q7Z6M2 555 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 TRIM31Q9BZY9 425 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 SFI1A8K8P3 1242 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 KRT19P08727 400 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 NR2F2P24468 414 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 ETF1P62495 437 aaKnown RBP12.89□□□□□ -0.35
LGR5-206ENST00000550851 CUL4BQ13620 913 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 VWA3BQ502W6 1294 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 MCF2L2Q86YR7 1114 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 ZNF215Q9UL58 517 aaPredicted RBP12.89□□□□□ -0.35
LGR5-206ENST00000550851 EXOC7Q9UPT5 735 aa12.89□□□□□ -0.35
LGR5-206ENST00000550851 ARHGAP23Q9P227 1491 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 LAD1O00515 517 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 ASNSP08243 561 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 FDPSP14324 419 aaKnown RBP12.88□□□□□ -0.35
LGR5-206ENST00000550851 CD19P15391 556 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 CASP7P55210 303 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 NEDD1Q8NHV4 660 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 ZNF526Q8TF50 670 aaPredicted RBP12.88□□□□□ -0.35
LGR5-206ENST00000550851 AK8Q96MA6 479 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 CTTNBP2NLQ9P2B4 639 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 CEP83Q9Y592 693 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 CTDNEP1O95476 244 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 TRPC3Q13507 836 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 ERCC6LQ2NKX8 1250 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 SHC4Q6S5L8 630 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 GSTA5Q7RTV2 222 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 MYRIPQ8NFW9 859 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 BHMT2Q9H2M3 363 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 DISC1Q9NRI5 854 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 IKBKBO14920 756 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 ZNF500O60304 480 aaPredicted RBP12.88□□□□□ -0.35
LGR5-206ENST00000550851 HSF2BPO75031 334 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 RESP18Q5W5W9 173 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 USP49Q70CQ1 688 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 DEPTORQ8TB45 409 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 WDR19Q8NEZ3 1342 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 SLIT1O75093 1534 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 LRRIQ4A6NIV6 560 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 ZBTB5O15062 677 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 CEP104O60308 925 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 VAV2P52735 878 aa12.88□□□□□ -0.35
LGR5-206ENST00000550851 PTF1AQ7RTS3 328 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms