RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 SEPT4O43236 478 aa10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 PGK2P07205 417 aa10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 EEF2P13639 858 aaKnown RBP10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 TAL1P17542 331 aaPredicted RBP10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 ATP5JP18859 108 aa10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 IRX6P78412 446 aaPredicted RBP10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 TRIM60Q495X7 471 aa10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 C9orf50Q5SZB4 431 aa10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 C20orf194Q5TEA3 1177 aa10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 C16orf86Q6ZW13 317 aa10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 RPAP2Q8IXW5 612 aaPredicted RBP10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 FERMT2Q96AC1 680 aa10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 MAML3Q96JK9 1138 aa10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 HAUS7Q99871 368 aa10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 OCSTAMPQ9BR26 566 aa10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 PUS7LQ9H0K6 701 aaKnown RBP10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 SWAP70Q9UH65 585 aa10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 MAP4K5Q9Y4K4 846 aa10.48□□□□□ -0.73
ATP2B1-207ENST00000550716 LTBP2Q14767 1821 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 WDR46O15213 610 aaKnown RBP10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 CAPN5O15484 640 aaPredicted RBP10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 STRNO43815 780 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 MSCO60682 206 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 NR3C2P08235 984 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 ITGB8P26012 769 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 ADCYAP1R1P41586 468 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 SNX17Q15036 470 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 LRRC41Q15345 812 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 TSHZ3Q63HK5 1081 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 CTR9Q6PD62 1173 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 SLC39A5Q6ZMH5 540 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 MB21D1Q8N884 522 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 REPS2Q8NFH8 660 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 NUP88Q99567 741 aaPredicted RBP10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 ARHGEF10LQ9HCE6 1279 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 PRDM5Q9NQX1 630 aaPredicted RBP10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 PDLIM7Q9NR12 457 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 ATP8A2Q9NTI2 1148 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 ADAMTS5Q9UNA0 930 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 GPSM3Q9Y4H4 160 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 SLC4A4Q9Y6R1 1079 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 PRUNE2Q8WUY3 3088 aa10.47□□□□□ -0.73
ATP2B1-207ENST00000550716 TRIM43BA6NCK2 446 aa10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 KBTBD13C9JR72 458 aa10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 RAB11FIP3O75154 756 aa10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 HMMRO75330 724 aa10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 BMP1P13497 986 aa10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 NR5A1Q13285 461 aa10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 UBE3CQ15386 1083 aa10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 SHHQ15465 462 aa10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 FAM83BQ5T0W9 1011 aa10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 STK11IPQ8N1F8 1099 aa10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 ADAM32Q8TC27 787 aa10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 BADQ92934 168 aa10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 TRIM43Q96BQ3 446 aaPredicted RBP10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 LBHD1Q9BQE6 289 aaPredicted RBP10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 MROH8Q9H579 483 aa10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 ATP13A2Q9NQ11 1180 aa10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 GMPR2Q9P2T1 348 aaKnown RBP10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 ZNF214Q9UL59 606 aaPredicted RBP10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 DDX19BQ9UMR2 479 aa10.46□□□□□ -0.73
ATP2B1-207ENST00000550716 BAZ2AQ9UIF9 1905 aaKnown RBP10.46□□□□□ -0.74
ATP2B1-207ENST00000550716 PARP14Q460N5 1801 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 VWA5AO00534 786 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 RAD21O60216 631 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 PGK1P00558 417 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 FCER1AP12319 257 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 RASA1P20936 1047 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 GRM5P41594 1212 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 EPHB4P54760 987 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 WDR4P57081 412 aaKnown RBP10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 ZNF792Q3KQV3 632 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 RIOX2Q8IUF8 465 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 ABRAQ8N0Z2 381 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 ARRDC4Q8NCT1 418 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 CCDC17Q96LX7 622 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 MMP19Q99542 508 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 SH2D4AQ9H788 454 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 EPB41L4AQ9HCS5 686 aaPredicted RBP10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 PPP1R9AQ9ULJ8 1098 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 RIPK3Q9Y572 518 aa10.45□□□□□ -0.74
ATP2B1-207ENST00000550716 ZNF865P0CJ78 1059 aaPredicted RBP10.44□□□□□ -0.74
ATP2B1-207ENST00000550716 TIMP2P16035 220 aa10.44□□□□□ -0.74
ATP2B1-207ENST00000550716 TLE2Q04725 743 aa10.44□□□□□ -0.74
ATP2B1-207ENST00000550716 FAM109BQ6ICB4 259 aaPredicted RBP10.44□□□□□ -0.74
ATP2B1-207ENST00000550716 OSBP2Q969R2 916 aa10.44□□□□□ -0.74
ATP2B1-207ENST00000550716 STRBPQ96SI9 672 aaKnown RBP10.44□□□□□ -0.74
ATP2B1-207ENST00000550716 TINF2Q9BSI4 451 aa10.44□□□□□ -0.74
ATP2B1-207ENST00000550716 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.44□□□□□ -0.74
ATP2B1-207ENST00000550716 XPNPEP3Q9NQH7 507 aa10.44□□□□□ -0.74
ATP2B1-207ENST00000550716 PHF24Q9UPV7 400 aa10.44□□□□□ -0.74
ATP2B1-207ENST00000550716 ROBO3Q96MS0 1386 aa10.43□□□□□ -0.74
ATP2B1-207ENST00000550716 GREB1LQ9C091 1923 aaPredicted RBP10.43□□□□□ -0.74
ATP2B1-207ENST00000550716 MYADML2A6NDP7 307 aa10.43□□□□□ -0.74
ATP2B1-207ENST00000550716 GSG1L2A8MUP6 293 aa10.43□□□□□ -0.74
ATP2B1-207ENST00000550716 ADCY6O43306 1168 aa10.43□□□□□ -0.74
ATP2B1-207ENST00000550716 ADAMTS4O75173 837 aa10.43□□□□□ -0.74
ATP2B1-207ENST00000550716 SLC25A27O95847 323 aa10.43□□□□□ -0.74
ATP2B1-207ENST00000550716 NDUFB10O96000 172 aa10.43□□□□□ -0.74
ATP2B1-207ENST00000550716 STAT3P40763 770 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms