RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 THSD7AQ9UPZ6 1657 aa5.27□□□□□ -1.57
LIMA1-206ENST00000550611 NRAPQ86VF7 1730 aa5.26□□□□□ -1.57
LIMA1-206ENST00000550611 ADGRB2O60241 1585 aa5.26□□□□□ -1.57
LIMA1-206ENST00000550611 ANKARQ7Z5J8 1434 aa5.26□□□□□ -1.57
LIMA1-206ENST00000550611 ZC3H12DA2A288 527 aaKnown RBP5.26□□□□□ -1.57
LIMA1-206ENST00000550611 OR14I1A6ND48 311 aa5.26□□□□□ -1.57
LIMA1-206ENST00000550611 RBAK-RBAKDNI3L0D1 243 aa5.26□□□□□ -1.57
LIMA1-206ENST00000550611 GRIN3BO60391 1043 aa5.26□□□□□ -1.57
LIMA1-206ENST00000550611 FBXO24O75426 580 aa5.26□□□□□ -1.57
LIMA1-206ENST00000550611 HSPA1AP0DMV8 641 aaKnown RBP5.26□□□□□ -1.57
LIMA1-206ENST00000550611 HSPA1BP0DMV9 641 aaKnown RBP5.26□□□□□ -1.57
LIMA1-206ENST00000550611 EVA1CP58658 441 aa5.26□□□□□ -1.57
LIMA1-206ENST00000550611 ZC3H6P61129 1189 aaKnown RBP5.26□□□□□ -1.57
LIMA1-206ENST00000550611 DUSP4Q13115 394 aa5.26□□□□□ -1.57
LIMA1-206ENST00000550611 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.26□□□□□ -1.57
LIMA1-206ENST00000550611 ANKS4BQ8N8V4 417 aa5.26□□□□□ -1.57
LIMA1-206ENST00000550611 MPHOSPH9Q99550 1183 aa5.26□□□□□ -1.57
LIMA1-206ENST00000550611 GPR160Q9UJ42 338 aa5.26□□□□□ -1.57
LIMA1-206ENST00000550611 PCDHA11Q9Y5I1 949 aa5.26□□□□□ -1.57
LIMA1-206ENST00000550611 DHX57Q6P158 1386 aaKnown RBP5.26□□□□□ -1.57
LIMA1-206ENST00000550611 PRR36Q9H6K5 1346 aa5.25□□□□□ -1.57
LIMA1-206ENST00000550611 PSPNO60542 156 aa5.25□□□□□ -1.57
LIMA1-206ENST00000550611 SRSF3P84103 164 aaKnown RBP5.25□□□□□ -1.57
LIMA1-206ENST00000550611 DSC3Q14574 896 aa5.25□□□□□ -1.57
LIMA1-206ENST00000550611 ENOX2Q16206 610 aaKnown RBP5.25□□□□□ -1.57
LIMA1-206ENST00000550611 SLC6A19Q695T7 634 aa5.25□□□□□ -1.57
LIMA1-206ENST00000550611 FRMD5Q7Z6J6 570 aa5.25□□□□□ -1.57
LIMA1-206ENST00000550611 CCDC82Q8N4S0 544 aa5.25□□□□□ -1.57
LIMA1-206ENST00000550611 PPP1R13LQ8WUF5 828 aa5.25□□□□□ -1.57
LIMA1-206ENST00000550611 EPB41L4AQ9HCS5 686 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-206ENST00000550611 LUC7LQ9NQ29 371 aaKnown RBP5.25□□□□□ -1.57
LIMA1-206ENST00000550611 PRDM11Q9NQV5 511 aa5.25□□□□□ -1.57
LIMA1-206ENST00000550611 USTQ9Y2C2 406 aa5.25□□□□□ -1.57
LIMA1-206ENST00000550611 FMN2Q9NZ56 1722 aa5.25□□□□□ -1.57
LIMA1-206ENST00000550611 KIF1BO60333 1816 aa5.25□□□□□ -1.57
LIMA1-206ENST00000550611 KIF1AQ12756 1690 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 PPLO60437 1756 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 PNMA6FA0A0J9YX94 578 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 GFRA2O00451 464 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 IRS4O14654 1257 aaPredicted RBP5.24□□□□□ -1.57
LIMA1-206ENST00000550611 GIPC1O14908 333 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 N4BP3O15049 544 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 TOMM70O94826 608 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 CELA3AP09093 270 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 SAFB2Q14151 953 aaKnown RBP eCLIP5.24□□□□□ -1.57
LIMA1-206ENST00000550611 ZNF827Q17R98 1081 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 TMC7Q7Z402 723 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 DTWD2Q8NBA8 298 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 FBF1Q8TES7 1133 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 LINC01599Q8WXQ3 324 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 NMRK2Q9NPI5 230 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 SIRT5Q9NXA8 310 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 TJP2Q9UDY2 1190 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 KCNH3Q9ULD8 1083 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 CEP131Q9UPN4 1083 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 MYRFQ9Y2G1 1151 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 ZNF281Q9Y2X9 895 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 MAP3K5Q99683 1374 aa5.24□□□□□ -1.57
LIMA1-206ENST00000550611 TNS2Q63HR2 1409 aa5.23□□□□□ -1.57
LIMA1-206ENST00000550611 NOTOA8MTQ0 251 aa5.23□□□□□ -1.57
LIMA1-206ENST00000550611 CDK8P49336 464 aa5.23□□□□□ -1.57
LIMA1-206ENST00000550611 NLRX1Q86UT6 975 aa5.23□□□□□ -1.57
LIMA1-206ENST00000550611 ZDHHC14Q8IZN3 488 aa5.23□□□□□ -1.57
LIMA1-206ENST00000550611 TCP11L2Q8N4U5 519 aa5.23□□□□□ -1.57
LIMA1-206ENST00000550611 TMEM87BQ96K49 555 aa5.23□□□□□ -1.57
LIMA1-206ENST00000550611 POGKQ9P215 609 aa5.23□□□□□ -1.57
LIMA1-206ENST00000550611 EBF1Q9UH73 591 aa5.23□□□□□ -1.57
LIMA1-206ENST00000550611 GPRASP1Q5JY77 1395 aa5.23□□□□□ -1.57
LIMA1-206ENST00000550611 KIAA0232Q92628 1395 aa5.23□□□□□ -1.57
LIMA1-206ENST00000550611 KNDC1Q76NI1 1749 aa5.23□□□□□ -1.57
LIMA1-206ENST00000550611 ADCY9O60503 1353 aa5.22□□□□□ -1.57
LIMA1-206ENST00000550611 EPHB3P54753 998 aa5.22□□□□□ -1.57
LIMA1-206ENST00000550611 TEKQ02763 1124 aa5.22□□□□□ -1.57
LIMA1-206ENST00000550611 SV2BQ7L1I2 683 aa5.22□□□□□ -1.57
LIMA1-206ENST00000550611 DPH2Q9BQC3 489 aaPredicted RBP5.22□□□□□ -1.57
LIMA1-206ENST00000550611 G6PC3Q9BUM1 346 aa5.22□□□□□ -1.57
LIMA1-206ENST00000550611 HIRIP3Q9BW71 556 aaPredicted RBP5.22□□□□□ -1.57
LIMA1-206ENST00000550611 OSBPL7Q9BZF2 842 aa5.22□□□□□ -1.57
LIMA1-206ENST00000550611 CNTD2Q9H8S5 307 aa5.22□□□□□ -1.57
LIMA1-206ENST00000550611 CRTAC1Q9NQ79 661 aa5.22□□□□□ -1.57
LIMA1-206ENST00000550611 CNOT11Q9UKZ1 510 aaKnown RBP5.22□□□□□ -1.57
LIMA1-206ENST00000550611 TNRC18O15417 2968 aaPredicted RBP5.22□□□□□ -1.57
LIMA1-206ENST00000550611 RGPD8O14715 1765 aaPredicted RBP5.21□□□□□ -1.57
LIMA1-206ENST00000550611 ABCA3Q99758 1704 aa5.21□□□□□ -1.58
LIMA1-206ENST00000550611 POLD1P28340 1107 aa5.21□□□□□ -1.58
LIMA1-206ENST00000550611 YBX1P67809 324 aaKnown RBP5.21□□□□□ -1.58
LIMA1-206ENST00000550611 PLCB3Q01970 1234 aa5.21□□□□□ -1.58
LIMA1-206ENST00000550611 ADGRF1Q5T601 910 aa5.21□□□□□ -1.58
LIMA1-206ENST00000550611 MCATQ8IVS2 390 aaKnown RBP5.21□□□□□ -1.58
LIMA1-206ENST00000550611 LINC01356Q8N9X3 169 aa5.21□□□□□ -1.58
LIMA1-206ENST00000550611 NGDNQ8NEJ9 315 aaKnown RBP5.21□□□□□ -1.58
LIMA1-206ENST00000550611 THRAP3Q9Y2W1 955 aaKnown RBP5.21□□□□□ -1.58
LIMA1-206ENST00000550611 COL14A1Q05707 1796 aaKnown RBP5.21□□□□□ -1.58
LIMA1-206ENST00000550611 ADGRB1O14514 1584 aa5.21□□□□□ -1.58
LIMA1-206ENST00000550611 TRPM3Q9HCF6 1732 aaPredicted RBP5.2□□□□□ -1.58
LIMA1-206ENST00000550611 POLR3AO14802 1390 aaPredicted RBP5.2□□□□□ -1.58
LIMA1-206ENST00000550611 CPDO75976 1380 aa5.2□□□□□ -1.58
LIMA1-206ENST00000550611 EIF3AQ14152 1382 aaKnown RBP5.2□□□□□ -1.58
LIMA1-206ENST00000550611 TULP4Q9NRJ4 1543 aa5.2□□□□□ -1.58
LIMA1-206ENST00000550611 TREHO43280 583 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms