RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 PLA2G12BQ9BX93 195 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 DEFB129Q9H1M3 183 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 DCP1AQ9NPI6 582 aaPredicted RBP13.49□□□□□ -0.25
NR4A1-215ENST00000550557 JADE2Q9NQC1 790 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 ZDHHC9Q9Y397 364 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 GOLGA6L10A0A0M3HER8 536 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 KRT9P35527 623 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 ANKRD13AQ8IZ07 590 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 NLRP7Q8WX94 980 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 STAMQ92783 540 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 CEP170P1Q96L14 293 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 FAM49AQ9H0Q0 323 aaPredicted RBP13.49□□□□□ -0.25
NR4A1-215ENST00000550557 IFNKQ9P0W0 207 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 ZSWIM5Q9P217 1185 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 RFX7Q2KHR2 1363 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 FDX1P10109 184 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 GCFC2P16383 781 aaKnown RBP13.48□□□□□ -0.25
NR4A1-215ENST00000550557 YWHAEP62258 255 aaKnown RBP13.48□□□□□ -0.25
NR4A1-215ENST00000550557 INTS5Q6P9B9 1019 aaKnown RBP13.48□□□□□ -0.25
NR4A1-215ENST00000550557 SLC44A5Q8NCS7 719 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 LMBR1Q8WVP7 490 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 TSC1Q92574 1164 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 ADARB2Q9NS39 739 aaKnown RBP13.48□□□□□ -0.25
NR4A1-215ENST00000550557 CTNND2Q9UQB3 1225 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 PNMA6FA0A0J9YX94 578 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 PDIA3P30101 505 aaKnown RBP13.48□□□□□ -0.25
NR4A1-215ENST00000550557 HOXA13P31271 388 aaPredicted RBP13.48□□□□□ -0.25
NR4A1-215ENST00000550557 FAM193AP78312 1265 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 ODR4Q5SWX8 454 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 MYSM1Q5VVJ2 828 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 CCDC50Q8IVM0 306 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 NACC1Q96RE7 527 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 DAGLAQ9Y4D2 1042 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.48□□□□□ -0.25
NR4A1-215ENST00000550557 COL4A3BPQ9Y5P4 624 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 TMEM191BP0C7N4 346 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 U2AF2P26368 475 aaKnown RBP eCLIP13.48□□□□□ -0.25
NR4A1-215ENST00000550557 FOXO4P98177 505 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 MMS19Q96T76 1030 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 SRRTQ9BXP5 876 aaKnown RBP13.48□□□□□ -0.25
NR4A1-215ENST00000550557 FHDC1Q9C0D6 1143 aaPredicted RBP13.48□□□□□ -0.25
NR4A1-215ENST00000550557 ANKFY1Q9P2R3 1169 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 ARHGAP23Q9P227 1491 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 TRERF1Q96PN7 1200 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 MED10Q9BTT4 135 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 INCENPQ9NQS7 918 aa13.48□□□□□ -0.25
NR4A1-215ENST00000550557 F5H6K3 240 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 GTF2F1P35269 517 aaKnown RBP eCLIP13.47□□□□□ -0.25
NR4A1-215ENST00000550557 KLRC3Q07444 240 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 ELMSAN1Q6PJG2 1045 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 NSUN6Q8TEA1 469 aaKnown RBP13.47□□□□□ -0.25
NR4A1-215ENST00000550557 ERO1AQ96HE7 468 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 PGBD1Q96JS3 809 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 USP28Q96RU2 1077 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 LUC7L2Q9Y383 392 aaKnown RBP13.47□□□□□ -0.25
NR4A1-215ENST00000550557 PSAPP07602 524 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 CETPP11597 493 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 YY1P25490 414 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 CYP2J2P51589 502 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 HLTFQ14527 1009 aaKnown RBP eCLIP13.47□□□□□ -0.25
NR4A1-215ENST00000550557 RIOK1Q9BRS2 568 aaKnown RBP13.47□□□□□ -0.25
NR4A1-215ENST00000550557 PCDHA4Q9UN74 947 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 DAPK3O43293 454 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 ENTPD3O75355 529 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 DDIT3P35638 169 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 KMT5BQ4FZB7 885 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 RCSD1Q6JBY9 416 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 SYT10Q6XYQ8 523 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 CCDC113Q9H0I3 377 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 PRDM5Q9NQX1 630 aaPredicted RBP13.47□□□□□ -0.25
NR4A1-215ENST00000550557 TNFAIP3P21580 790 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 TTLL4Q14679 1199 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 NSUN7Q8NE18 718 aaKnown RBP13.47□□□□□ -0.25
NR4A1-215ENST00000550557 RASGRP4Q8TDF6 673 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 ACAD9Q9H845 621 aa13.47□□□□□ -0.25
NR4A1-215ENST00000550557 MARK3P27448 753 aa13.46□□□□□ -0.25
NR4A1-215ENST00000550557 BIRC2Q13490 618 aa13.46□□□□□ -0.25
NR4A1-215ENST00000550557 MTMR2Q13614 643 aa13.46□□□□□ -0.25
NR4A1-215ENST00000550557 MTERF2Q49AM1 385 aa13.46□□□□□ -0.25
NR4A1-215ENST00000550557 ADALQ6DHV7 355 aa13.46□□□□□ -0.25
NR4A1-215ENST00000550557 RPAP3Q9H6T3 665 aaPredicted RBP13.46□□□□□ -0.25
NR4A1-215ENST00000550557 RABL6Q3YEC7 729 aaPredicted RBP13.46□□□□□ -0.25
NR4A1-215ENST00000550557 FAM151AQ8WW52 585 aa13.46□□□□□ -0.25
NR4A1-215ENST00000550557 TSNARE1Q96NA8 513 aa13.46□□□□□ -0.25
NR4A1-215ENST00000550557 MAK16Q9BXY0 300 aaKnown RBP13.46□□□□□ -0.25
NR4A1-215ENST00000550557 MTIF3Q9H2K0 278 aaKnown RBP13.46□□□□□ -0.25
NR4A1-215ENST00000550557 C19orf81C9J6K1 198 aa13.46□□□□□ -0.26
NR4A1-215ENST00000550557 RASSF7Q02833 373 aa13.46□□□□□ -0.26
NR4A1-215ENST00000550557 HHIPL2Q6UWX4 724 aa13.46□□□□□ -0.26
NR4A1-215ENST00000550557 GOLGA5Q8TBA6 731 aa13.46□□□□□ -0.26
NR4A1-215ENST00000550557 TBCKQ8TEA7 893 aa13.46□□□□□ -0.26
NR4A1-215ENST00000550557 PDLIM2Q96JY6 352 aa13.46□□□□□ -0.26
NR4A1-215ENST00000550557 LBHD1Q9BQE6 289 aaPredicted RBP13.46□□□□□ -0.26
NR4A1-215ENST00000550557 MXD3Q9BW11 206 aa13.46□□□□□ -0.26
NR4A1-215ENST00000550557 RRAGCQ9HB90 399 aa13.46□□□□□ -0.26
NR4A1-215ENST00000550557 HNRNPDLO14979 420 aaKnown RBP13.46□□□□□ -0.26
NR4A1-215ENST00000550557 MYL5Q02045 173 aa13.46□□□□□ -0.26
NR4A1-215ENST00000550557 PAK1Q13153 545 aa13.46□□□□□ -0.26
NR4A1-215ENST00000550557 SKIV2LQ15477 1246 aaKnown RBP13.46□□□□□ -0.26
NR4A1-215ENST00000550557 LIN9Q5TKA1 542 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms