RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 C16orf59Q7L2K0 433 aa12.78□□□□□ -0.36
PFDN5-210ENST00000550513 ZNF589Q86UQ0 364 aaPredicted RBP12.78□□□□□ -0.36
PFDN5-210ENST00000550513 SLC43A3Q8NBI5 491 aa12.78□□□□□ -0.36
PFDN5-210ENST00000550513 MORC4Q8TE76 937 aa12.78□□□□□ -0.36
PFDN5-210ENST00000550513 SEZ6LQ9BYH1 1024 aa12.78□□□□□ -0.36
PFDN5-210ENST00000550513 PBX4Q9BYU1 374 aa12.78□□□□□ -0.36
PFDN5-210ENST00000550513 MTIF3Q9H2K0 278 aaKnown RBP12.78□□□□□ -0.36
PFDN5-210ENST00000550513 GPCPD1Q9NPB8 672 aa12.78□□□□□ -0.36
PFDN5-210ENST00000550513 IL23AQ9NPF7 189 aa12.78□□□□□ -0.36
PFDN5-210ENST00000550513 TCP11L1Q9NUJ3 509 aa12.78□□□□□ -0.36
PFDN5-210ENST00000550513 Q9Y3F1 56 aa12.78□□□□□ -0.36
PFDN5-210ENST00000550513 UMODL1Q5DID0 1318 aa12.78□□□□□ -0.36
PFDN5-210ENST00000550513 LOC102724159A0A0B4J2E5 919 aa12.77□□□□□ -0.37
PFDN5-210ENST00000550513 B4GALT4O60513 344 aa12.77□□□□□ -0.37
PFDN5-210ENST00000550513 PCP11498 1178 aaKnown RBP12.77□□□□□ -0.37
PFDN5-210ENST00000550513 PBX2P40425 430 aa12.77□□□□□ -0.37
PFDN5-210ENST00000550513 PSMC6P62333 389 aa12.77□□□□□ -0.37
PFDN5-210ENST00000550513 BAATQ14032 418 aaPredicted RBP12.77□□□□□ -0.37
PFDN5-210ENST00000550513 PWP2Q15269 919 aaKnown RBP12.77□□□□□ -0.37
PFDN5-210ENST00000550513 ZNF365Q70YC5 407 aa12.77□□□□□ -0.37
PFDN5-210ENST00000550513 TICAM2Q86XR7 235 aa12.77□□□□□ -0.37
PFDN5-210ENST00000550513 LNPKQ9C0E8 428 aa12.77□□□□□ -0.37
PFDN5-210ENST00000550513 GRIN2DO15399 1336 aa12.77□□□□□ -0.37
PFDN5-210ENST00000550513 DOCK5Q9H7D0 1870 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 GRXCR1A8MXD5 290 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 CALML3P27482 149 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 CPT1AP50416 773 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 MFAP1P55081 439 aaKnown RBP12.76□□□□□ -0.37
PFDN5-210ENST00000550513 ZNF543Q08ER8 600 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 RAB30Q15771 203 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 DUSP28Q4G0W2 176 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 AKNAD1Q5T1N1 836 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 TMEM63BQ5T3F8 832 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 RNF207Q6ZRF8 634 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 MFSD6Q6ZSS7 791 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 TBC1D10CQ8IV04 446 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 RILPL2Q969X0 211 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 GAS2L1Q99501 681 aaPredicted RBP12.76□□□□□ -0.37
PFDN5-210ENST00000550513 MPHOSPH6Q99547 160 aaKnown RBP12.76□□□□□ -0.37
PFDN5-210ENST00000550513 NOC4LQ9BVI4 516 aaKnown RBP12.76□□□□□ -0.37
PFDN5-210ENST00000550513 RNF41Q9H4P4 317 aaPredicted RBP12.76□□□□□ -0.37
PFDN5-210ENST00000550513 POLR3EQ9NVU0 708 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 PNMA2Q9UL42 364 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 NEDD4P46934 1319 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 WDR19Q8NEZ3 1342 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 RAD50Q92878 1312 aa12.76□□□□□ -0.37
PFDN5-210ENST00000550513 CHD9Q3L8U1 2897 aa12.75□□□□□ -0.37
PFDN5-210ENST00000550513 SIP14410 1827 aa12.75□□□□□ -0.37
PFDN5-210ENST00000550513 CCL23P55773 120 aa12.75□□□□□ -0.37
PFDN5-210ENST00000550513 PPP2R5BQ15173 497 aa12.75□□□□□ -0.37
PFDN5-210ENST00000550513 USP38Q8NB14 1042 aa12.75□□□□□ -0.37
PFDN5-210ENST00000550513 TET1Q8NFU7 2136 aa12.75□□□□□ -0.37
PFDN5-210ENST00000550513 OR6J1Q8NGC5 347 aa12.75□□□□□ -0.37
PFDN5-210ENST00000550513 HERVK_113Q902F9 699 aa12.75□□□□□ -0.37
PFDN5-210ENST00000550513 WDR11Q9BZH6 1224 aa12.75□□□□□ -0.37
PFDN5-210ENST00000550513 TRPV6Q9H1D0 765 aa12.75□□□□□ -0.37
PFDN5-210ENST00000550513 WNT8AQ9H1J5 351 aa12.75□□□□□ -0.37
PFDN5-210ENST00000550513 ALDH8A1Q9H2A2 487 aaPredicted RBP12.75□□□□□ -0.37
PFDN5-210ENST00000550513 REV3LO60673 3130 aa12.75□□□□□ -0.37
PFDN5-210ENST00000550513 MUC3AQ02505 3323 aa12.74□□□□□ -0.37
PFDN5-210ENST00000550513 CHD7Q9P2D1 2997 aa12.74□□□□□ -0.37
PFDN5-210ENST00000550513 TNKSO95271 1327 aa12.74□□□□□ -0.37
PFDN5-210ENST00000550513 FGBP02675 491 aa12.74□□□□□ -0.37
PFDN5-210ENST00000550513 MYL3P08590 195 aa12.74□□□□□ -0.37
PFDN5-210ENST00000550513 SNHG28P0DPA3 235 aa12.74□□□□□ -0.37
PFDN5-210ENST00000550513 RPS6P62753 249 aaKnown RBP12.74□□□□□ -0.37
PFDN5-210ENST00000550513 PURAQ00577 322 aaKnown RBP12.74□□□□□ -0.37
PFDN5-210ENST00000550513 PDE4DQ08499 809 aa12.74□□□□□ -0.37
PFDN5-210ENST00000550513 GPATCH4Q5T3I0 446 aaKnown RBP12.74□□□□□ -0.37
PFDN5-210ENST00000550513 OTOP2Q7RTS6 562 aa12.74□□□□□ -0.37
PFDN5-210ENST00000550513 CLEC4DQ8WXI8 215 aa12.74□□□□□ -0.37
PFDN5-210ENST00000550513 ESR2Q92731 530 aa12.74□□□□□ -0.37
PFDN5-210ENST00000550513 TTC14Q96N46 770 aa12.74□□□□□ -0.37
PFDN5-210ENST00000550513 ZKSCAN3Q9BRR0 538 aa12.74□□□□□ -0.37
PFDN5-210ENST00000550513 CXXC1Q9P0U4 656 aaPredicted RBP12.74□□□□□ -0.37
PFDN5-210ENST00000550513 MSRAQ9UJ68 235 aa12.74□□□□□ -0.37
PFDN5-210ENST00000550513 TTC28Q96AY4 2481 aa12.74□□□□□ -0.37
PFDN5-210ENST00000550513 MICAL3Q7RTP6 2002 aa12.73□□□□□ -0.37
PFDN5-210ENST00000550513 RBM47A0AV96 593 aaKnown RBP12.73□□□□□ -0.37
PFDN5-210ENST00000550513 NKRFO15226 690 aaKnown RBP eCLIP12.73□□□□□ -0.37
PFDN5-210ENST00000550513 EDNRBP24530 442 aa12.73□□□□□ -0.37
PFDN5-210ENST00000550513 USH1GQ495M9 461 aa12.73□□□□□ -0.37
PFDN5-210ENST00000550513 BRDTQ58F21 947 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-210ENST00000550513 B4GALNT3Q6L9W6 998 aa12.73□□□□□ -0.37
PFDN5-210ENST00000550513 DNERQ8NFT8 737 aa12.73□□□□□ -0.37
PFDN5-210ENST00000550513 SCFD2Q8WU76 684 aa12.73□□□□□ -0.37
PFDN5-210ENST00000550513 SYMPKQ92797 1274 aaKnown RBP12.73□□□□□ -0.37
PFDN5-210ENST00000550513 SCLYQ96I15 445 aa12.73□□□□□ -0.37
PFDN5-210ENST00000550513 MTG1Q9BT17 334 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-210ENST00000550513 PRDM12Q9H4Q4 367 aa12.73□□□□□ -0.37
PFDN5-210ENST00000550513 GPHNQ9NQX3 736 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-210ENST00000550513 TRMT13Q9NUP7 481 aaKnown RBP12.73□□□□□ -0.37
PFDN5-210ENST00000550513 TCF20Q9UGU0 1960 aaKnown RBP12.72□□□□□ -0.37
PFDN5-210ENST00000550513 ZBBXA8MT70 800 aa12.72□□□□□ -0.37
PFDN5-210ENST00000550513 B4DLN1 442 aa12.72□□□□□ -0.37
PFDN5-210ENST00000550513 ZNF213O14771 459 aa12.72□□□□□ -0.37
PFDN5-210ENST00000550513 PFKMP08237 780 aa12.72□□□□□ -0.37
PFDN5-210ENST00000550513 SUPT20HL2P0C7V6 817 aa12.72□□□□□ -0.37
PFDN5-210ENST00000550513 GOLGA8HP0CJ92 632 aa12.72□□□□□ -0.37
PFDN5-210ENST00000550513 SDSP20132 328 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms