RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 ZNF444Q8N0Y2 327 aaPredicted RBP8.12□□□□□ -1.11
CBX5-204ENST00000550411 MSL3Q8N5Y2 521 aaKnown RBP8.12□□□□□ -1.11
CBX5-204ENST00000550411 GMCL1P1Q8NEA9 526 aa8.12□□□□□ -1.11
CBX5-204ENST00000550411 STAG1Q8WVM7 1258 aa8.12□□□□□ -1.11
CBX5-204ENST00000550411 DDX11Q96FC9 970 aa8.12□□□□□ -1.11
CBX5-204ENST00000550411 PHOX2BQ99453 314 aa8.12□□□□□ -1.11
CBX5-204ENST00000550411 SLF1Q9BQI6 1058 aa8.12□□□□□ -1.11
CBX5-204ENST00000550411 TSEN34Q9BSV6 310 aaKnown RBP8.12□□□□□ -1.11
CBX5-204ENST00000550411 STARD7Q9NQZ5 370 aa8.12□□□□□ -1.11
CBX5-204ENST00000550411 DIAPH3Q9NSV4 1193 aa8.12□□□□□ -1.11
CBX5-204ENST00000550411 TMEM39AQ9NV64 488 aa8.12□□□□□ -1.11
CBX5-204ENST00000550411 CLIP2Q9UDT6 1046 aa8.12□□□□□ -1.11
CBX5-204ENST00000550411 FAM184BQ9ULE4 1060 aa8.12□□□□□ -1.11
CBX5-204ENST00000550411 CNPY2Q9Y2B0 182 aa8.12□□□□□ -1.11
CBX5-204ENST00000550411 RAD50Q92878 1312 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 SYNGAP1Q96PV0 1343 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 SPTBN5Q9NRC6 3674 aaKnown RBP8.11□□□□□ -1.11
CBX5-204ENST00000550411 KIAA1671Q9BY89 1806 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.11□□□□□ -1.11
CBX5-204ENST00000550411 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.11□□□□□ -1.11
CBX5-204ENST00000550411 MOXD2PA6NHM9 499 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 DCDC2CA8MYV0 355 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 RANBP6O60518 1105 aaKnown RBP8.11□□□□□ -1.11
CBX5-204ENST00000550411 SLC3A2P08195 630 aaKnown RBP8.11□□□□□ -1.11
CBX5-204ENST00000550411 SLC4A3P48751 1232 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 ACLYP53396 1101 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 EPHB4P54760 987 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 PTH1RQ03431 593 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 FAAP100Q0VG06 881 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 AKNAD1Q5T1N1 836 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 KLHDC9Q8NEP7 349 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 NUP133Q8WUM0 1156 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 LENG1Q96BZ8 264 aaPredicted RBP8.11□□□□□ -1.11
CBX5-204ENST00000550411 GMCL1Q96IK5 515 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 FGD4Q96M96 766 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 TOX2Q96NM4 488 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 DSCC1Q9BVC3 393 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 TEX13BQ9BXU2 312 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 ZNF287Q9HBT7 754 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 NPDC1Q9NQX5 325 aaPredicted RBP8.11□□□□□ -1.11
CBX5-204ENST00000550411 RIPK3Q9Y572 518 aa8.11□□□□□ -1.11
CBX5-204ENST00000550411 ZNF536O15090 1300 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 MROH7Q68CQ1 1323 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 TSPY2A6NKD2 308 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 HIP1O00291 1037 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 ATP2A1O14983 1001 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 SGSM2O43147 1006 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 DUSP11O75319 330 aaKnown RBP8.1□□□□□ -1.11
CBX5-204ENST00000550411 SNAI1O95863 264 aaPredicted RBP8.1□□□□□ -1.11
CBX5-204ENST00000550411 TIMP1P01033 207 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 COL9A3Q14050 684 aaPredicted RBP8.1□□□□□ -1.11
CBX5-204ENST00000550411 KCNA10Q16322 511 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 SLFN13Q68D06 897 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 MAMDC4Q6UXC1 1216 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 ANKRD33Q7Z3H0 272 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 CPXCR1Q8N123 301 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 PRPF38AQ8NAV1 312 aaKnown RBP8.1□□□□□ -1.11
CBX5-204ENST00000550411 CHMP4CQ96CF2 233 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 GLT1D1Q96MS3 346 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.1□□□□□ -1.11
CBX5-204ENST00000550411 SLC38A10Q9HBR0 1119 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 GPCPD1Q9NPB8 672 aa8.1□□□□□ -1.11
CBX5-204ENST00000550411 ZHX1Q9UKY1 873 aaPredicted RBP8.1□□□□□ -1.11
CBX5-204ENST00000550411 CTDP1Q9Y5B0 961 aaPredicted RBP8.1□□□□□ -1.11
CBX5-204ENST00000550411 CHD9Q3L8U1 2897 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 ELP1O95163 1332 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 DNAJC25-GNG10A0A024R161 153 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 MYADML2A6NDP7 307 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 ZBED4O75132 1171 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 ASGR1P07306 291 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 C6orf222P0C671 652 aaPredicted RBP8.09□□□□□ -1.11
CBX5-204ENST00000550411 SNHG28P0DPA3 235 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 BMP3P12645 472 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 MCCP23508 829 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 DNAJB2P25686 324 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 CST5P28325 142 aaPredicted RBP8.09□□□□□ -1.11
CBX5-204ENST00000550411 CLCN1P35523 988 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 MFAP1P55081 439 aaKnown RBP8.09□□□□□ -1.11
CBX5-204ENST00000550411 ACVR2BQ13705 512 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 RRP12Q5JTH9 1297 aaKnown RBP8.09□□□□□ -1.11
CBX5-204ENST00000550411 CCSAPQ6IQ19 270 aaPredicted RBP8.09□□□□□ -1.11
CBX5-204ENST00000550411 MFSD5Q6N075 450 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 STOX1Q6ZVD7 989 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 KCTD1Q719H9 257 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 CENPQQ7L2Z9 268 aaPredicted RBP8.09□□□□□ -1.11
CBX5-204ENST00000550411 ANKRD35Q8N283 1001 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 PCSK9Q8NBP7 692 aaKnown RBP8.09□□□□□ -1.11
CBX5-204ENST00000550411 SYMPKQ92797 1274 aaKnown RBP8.09□□□□□ -1.11
CBX5-204ENST00000550411 KIFC2Q96AC6 838 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 TMEM47Q9BQJ4 181 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 ABHD16BQ9H3Z7 469 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 SPC25Q9HBM1 224 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 TCP11L1Q9NUJ3 509 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.09□□□□□ -1.11
CBX5-204ENST00000550411 FBXO40Q9UH90 709 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 STX8Q9UNK0 236 aa8.09□□□□□ -1.11
CBX5-204ENST00000550411 MYO7AQ13402 2215 aa8.09□□□□□ -1.12
CBX5-204ENST00000550411 ASTN1O14525 1302 aa8.08□□□□□ -1.12
CBX5-204ENST00000550411 B4E1Z4 1266 aa8.08□□□□□ -1.12
CBX5-204ENST00000550411 TMEM232C9JQI7 657 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms