RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 ADD1P35611 737 aaKnown RBP13.03□□□□□ -0.32
RAB5B-208ENST00000550283 HABP4Q5JVS0 413 aaKnown RBP13.03□□□□□ -0.32
RAB5B-208ENST00000550283 TYW1BQ6NUM6 668 aa13.03□□□□□ -0.32
RAB5B-208ENST00000550283 RUFY3Q7L099 469 aa13.03□□□□□ -0.32
RAB5B-208ENST00000550283 SYTL5Q8TDW5 730 aaPredicted RBP13.03□□□□□ -0.32
RAB5B-208ENST00000550283 TAAR1Q96RJ0 339 aa13.03□□□□□ -0.32
RAB5B-208ENST00000550283 MAP3K14Q99558 947 aa13.03□□□□□ -0.32
RAB5B-208ENST00000550283 SPZ1Q9BXG8 430 aa13.03□□□□□ -0.32
RAB5B-208ENST00000550283 PDGFCQ9NRA1 345 aa13.03□□□□□ -0.32
RAB5B-208ENST00000550283 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.03□□□□□ -0.32
RAB5B-208ENST00000550283 OGDHLQ9ULD0 1010 aa13.03□□□□□ -0.32
RAB5B-208ENST00000550283 CNTNAP5Q8WYK1 1306 aa13.03□□□□□ -0.32
RAB5B-208ENST00000550283 DNAH12Q6ZR08 3092 aa13.02□□□□□ -0.32
RAB5B-208ENST00000550283 EPB41L2O43491 1005 aaKnown RBP13.02□□□□□ -0.33
RAB5B-208ENST00000550283 TFRCP02786 760 aaKnown RBP13.02□□□□□ -0.33
RAB5B-208ENST00000550283 HOXA13P31271 388 aaPredicted RBP13.02□□□□□ -0.33
RAB5B-208ENST00000550283 GJC2Q5T442 439 aaPredicted RBP13.02□□□□□ -0.33
RAB5B-208ENST00000550283 RNF207Q6ZRF8 634 aa13.02□□□□□ -0.33
RAB5B-208ENST00000550283 EEPD1Q7L9B9 569 aa13.02□□□□□ -0.33
RAB5B-208ENST00000550283 ZNF467Q7Z7K2 595 aaPredicted RBP13.02□□□□□ -0.33
RAB5B-208ENST00000550283 TMTC2Q8N394 836 aa13.02□□□□□ -0.33
RAB5B-208ENST00000550283 CTCFLQ8NI51 663 aaPredicted RBP13.02□□□□□ -0.33
RAB5B-208ENST00000550283 ZFP91Q96JP5 570 aaPredicted RBP13.02□□□□□ -0.33
RAB5B-208ENST00000550283 KIF2CQ99661 725 aa13.02□□□□□ -0.33
RAB5B-208ENST00000550283 NCOA5Q9HCD5 579 aaKnown RBP13.02□□□□□ -0.33
RAB5B-208ENST00000550283 DDX20Q9UHI6 824 aaKnown RBP13.02□□□□□ -0.33
RAB5B-208ENST00000550283 PCDHA1Q9Y5I3 950 aa13.02□□□□□ -0.33
RAB5B-208ENST00000550283 PNMA6FA0A0J9YX94 578 aa13.01□□□□□ -0.33
RAB5B-208ENST00000550283 MYADML2A6NDP7 307 aa13.01□□□□□ -0.33
RAB5B-208ENST00000550283 GOLGA8AA7E2F4 631 aa13.01□□□□□ -0.33
RAB5B-208ENST00000550283 GOLGA8BA8MQT2 603 aa13.01□□□□□ -0.33
RAB5B-208ENST00000550283 ZBTB43O43298 467 aa13.01□□□□□ -0.33
RAB5B-208ENST00000550283 ALDH5A1P51649 535 aaPredicted RBP13.01□□□□□ -0.33
RAB5B-208ENST00000550283 ACVR2BQ13705 512 aa13.01□□□□□ -0.33
RAB5B-208ENST00000550283 FBXO16Q8IX29 292 aaPredicted RBP13.01□□□□□ -0.33
RAB5B-208ENST00000550283 FBXL16Q8N461 479 aa13.01□□□□□ -0.33
RAB5B-208ENST00000550283 IL31RAQ8NI17 732 aa13.01□□□□□ -0.33
RAB5B-208ENST00000550283 MORC4Q8TE76 937 aa13.01□□□□□ -0.33
RAB5B-208ENST00000550283 GPKOWQ92917 476 aaPredicted RBP eCLIP13.01□□□□□ -0.33
RAB5B-208ENST00000550283 IL17RAQ96F46 866 aa13.01□□□□□ -0.33
RAB5B-208ENST00000550283 PAWRQ96IZ0 340 aaKnown RBP13.01□□□□□ -0.33
RAB5B-208ENST00000550283 AMNQ9BXJ7 453 aa13.01□□□□□ -0.33
RAB5B-208ENST00000550283 TM6SF1Q9BZW5 370 aa13.01□□□□□ -0.33
RAB5B-208ENST00000550283 ZHX1Q9UKY1 873 aaPredicted RBP13.01□□□□□ -0.33
RAB5B-208ENST00000550283 PFASO15067 1338 aa13.01□□□□□ -0.33
RAB5B-208ENST00000550283 ABCB11O95342 1321 aa13.01□□□□□ -0.33
RAB5B-208ENST00000550283 SYNGAP1Q96PV0 1343 aa13.01□□□□□ -0.33
RAB5B-208ENST00000550283 MYH6P13533 1939 aa13□□□□□ -0.33
RAB5B-208ENST00000550283 SEPT4O43236 478 aa13□□□□□ -0.33
RAB5B-208ENST00000550283 FARP2O94887 1054 aaPredicted RBP13□□□□□ -0.33
RAB5B-208ENST00000550283 LARGE1O95461 756 aa13□□□□□ -0.33
RAB5B-208ENST00000550283 PGK1P00558 417 aa13□□□□□ -0.33
RAB5B-208ENST00000550283 CFBP00751 764 aa13□□□□□ -0.33
RAB5B-208ENST00000550283 HMGB1P09429 215 aaKnown RBP13□□□□□ -0.33
RAB5B-208ENST00000550283 PDIA3P30101 505 aaKnown RBP13□□□□□ -0.33
RAB5B-208ENST00000550283 ADCYAP1R1P41586 468 aa13□□□□□ -0.33
RAB5B-208ENST00000550283 HSD17B4P51659 736 aa13□□□□□ -0.33
RAB5B-208ENST00000550283 EVCP57679 992 aa13□□□□□ -0.33
RAB5B-208ENST00000550283 NTRK3Q16288 839 aa13□□□□□ -0.33
RAB5B-208ENST00000550283 RTN1Q16799 776 aa13□□□□□ -0.33
RAB5B-208ENST00000550283 TAPT1Q6NXT6 567 aa13□□□□□ -0.33
RAB5B-208ENST00000550283 SLC5A4Q9NY91 659 aa13□□□□□ -0.33
RAB5B-208ENST00000550283 NAP1L2Q9ULW6 460 aaPredicted RBP13□□□□□ -0.33
RAB5B-208ENST00000550283 NID2Q14112 1375 aa12.99□□□□□ -0.33
RAB5B-208ENST00000550283 RBAK-RBAKDNI3L0D1 243 aa12.99□□□□□ -0.33
RAB5B-208ENST00000550283 CTAGE5O15320 804 aa12.99□□□□□ -0.33
RAB5B-208ENST00000550283 EDNRBP24530 442 aa12.99□□□□□ -0.33
RAB5B-208ENST00000550283 KIF5BP33176 963 aa12.99□□□□□ -0.33
RAB5B-208ENST00000550283 CCT2P78371 535 aaKnown RBP12.99□□□□□ -0.33
RAB5B-208ENST00000550283 GHRHRQ02643 423 aa12.99□□□□□ -0.33
RAB5B-208ENST00000550283 CCDC144BQ3MJ40 725 aa12.99□□□□□ -0.33
RAB5B-208ENST00000550283 WWC2Q6AWC2 1192 aa12.99□□□□□ -0.33
RAB5B-208ENST00000550283 RGS22Q8NE09 1264 aa12.99□□□□□ -0.33
RAB5B-208ENST00000550283 PHKBQ93100 1093 aa12.99□□□□□ -0.33
RAB5B-208ENST00000550283 TPCN1Q9ULQ1 816 aa12.99□□□□□ -0.33
RAB5B-208ENST00000550283 MRPL11Q9Y3B7 192 aaKnown RBP12.99□□□□□ -0.33
RAB5B-208ENST00000550283 CYP46A1Q9Y6A2 500 aa12.99□□□□□ -0.33
RAB5B-208ENST00000550283 ALPK3Q96L96 1907 aa12.99□□□□□ -0.33
RAB5B-208ENST00000550283 MEIS2O14770 477 aa12.98□□□□□ -0.33
RAB5B-208ENST00000550283 ADAMTS4O75173 837 aa12.98□□□□□ -0.33
RAB5B-208ENST00000550283 ARIH2O95376 493 aa12.98□□□□□ -0.33
RAB5B-208ENST00000550283 CALM1P0DP23 149 aa12.98□□□□□ -0.33
RAB5B-208ENST00000550283 CALM2P0DP24 149 aa12.98□□□□□ -0.33
RAB5B-208ENST00000550283 CALM3P0DP25 149 aa12.98□□□□□ -0.33
RAB5B-208ENST00000550283 COL6A1P12109 1028 aa12.98□□□□□ -0.33
RAB5B-208ENST00000550283 EIF2AK2P19525 551 aaKnown RBP12.98□□□□□ -0.33
RAB5B-208ENST00000550283 PSMA5P28066 241 aa12.98□□□□□ -0.33
RAB5B-208ENST00000550283 METAP2P50579 478 aaKnown RBP eCLIP12.98□□□□□ -0.33
RAB5B-208ENST00000550283 AK2P54819 239 aa12.98□□□□□ -0.33
RAB5B-208ENST00000550283 ST3GAL1Q11201 340 aa12.98□□□□□ -0.33
RAB5B-208ENST00000550283 STK3Q13188 491 aa12.98□□□□□ -0.33
RAB5B-208ENST00000550283 PKN1Q16512 942 aa12.98□□□□□ -0.33
RAB5B-208ENST00000550283 USP17L6PQ6QN14 398 aa12.98□□□□□ -0.33
RAB5B-208ENST00000550283 RRP36Q96EU6 259 aaKnown RBP12.98□□□□□ -0.33
RAB5B-208ENST00000550283 TSHZ2Q9NRE2 1034 aa12.98□□□□□ -0.33
RAB5B-208ENST00000550283 PDRG1Q9NUG6 133 aa12.98□□□□□ -0.33
RAB5B-208ENST00000550283 V9GY48 417 aaPredicted RBP12.98□□□□□ -0.33
RAB5B-208ENST00000550283 SYNRGQ9UMZ2 1314 aa12.97□□□□□ -0.33
RAB5B-208ENST00000550283 RGS20O76081 388 aa12.97□□□□□ -0.33
RAB5B-208ENST00000550283 SMPD1P17405 629 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms