RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 POTEB2H3BUK9 544 aa15.75■□□□□ 0.11
CACNB3-209ENST00000548860 ABCB4P21439 1286 aa15.75■□□□□ 0.11
CACNB3-209ENST00000548860 PABPC4Q13310 644 aaKnown RBP eCLIP15.75■□□□□ 0.11
CACNB3-209ENST00000548860 TTBK2Q6IQ55 1244 aa15.75■□□□□ 0.11
CACNB3-209ENST00000548860 P2RX5Q93086 422 aa15.75■□□□□ 0.11
CACNB3-209ENST00000548860 LSM14BQ9BX40 385 aaKnown RBP15.75■□□□□ 0.11
CACNB3-209ENST00000548860 SCAF8Q9UPN6 1271 aaKnown RBP15.75■□□□□ 0.11
CACNB3-209ENST00000548860 STK36Q9NRP7 1315 aa15.75■□□□□ 0.11
CACNB3-209ENST00000548860 CDK8P49336 464 aa15.75■□□□□ 0.11
CACNB3-209ENST00000548860 ADCY7P51828 1080 aa15.75■□□□□ 0.11
CACNB3-209ENST00000548860 ATP2C1P98194 919 aaPredicted RBP15.75■□□□□ 0.11
CACNB3-209ENST00000548860 APBA1Q02410 837 aa15.75■□□□□ 0.11
CACNB3-209ENST00000548860 PRR16Q569H4 304 aa15.75■□□□□ 0.11
CACNB3-209ENST00000548860 IQCEQ6IPM2 695 aa15.75■□□□□ 0.11
CACNB3-209ENST00000548860 PANX2Q96RD6 677 aa15.75■□□□□ 0.11
CACNB3-209ENST00000548860 RIOK1Q9BRS2 568 aaKnown RBP15.75■□□□□ 0.11
CACNB3-209ENST00000548860 RWDD2AQ9UIY3 292 aa15.75■□□□□ 0.11
CACNB3-209ENST00000548860 OVOS2A0A0G2JMS6 1433 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 GOLGA6L10A6NI86 522 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 TBC1D8O95759 1140 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 DNM2P50570 870 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 LINC00116Q8NCU8 138 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 MED15Q96RN5 788 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 PYM1Q9BRP8 204 aaKnown RBP15.74■□□□□ 0.11
CACNB3-209ENST00000548860 USP40Q9NVE5 1235 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 SORBS3O60504 671 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 LONP1P36776 959 aaKnown RBP15.74■□□□□ 0.11
CACNB3-209ENST00000548860 SEC23AQ15436 765 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 C8orf74Q6P047 294 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 CNNM4Q6P4Q7 775 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 NPHP3-ACAD11A0A0J9YXS1 232 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 CLIC2O15247 247 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 NFRKBQ6P4R8 1299 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 PCDHA12Q9UN75 941 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 HYOU1Q9Y4L1 999 aa15.74■□□□□ 0.11
CACNB3-209ENST00000548860 GOLGA6BA6NDN3 693 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 SLC1A4P43007 532 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 CKAP4Q07065 602 aaKnown RBP15.73■□□□□ 0.11
CACNB3-209ENST00000548860 NKX1-1Q15270 411 aaPredicted RBP15.73■□□□□ 0.11
CACNB3-209ENST00000548860 SYCP3Q8IZU3 236 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 AFAP1L1Q8TED9 768 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 NAA15Q9BXJ9 866 aaKnown RBP15.73■□□□□ 0.11
CACNB3-209ENST00000548860 LACRTQ9GZZ8 138 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 RGPD5Q99666 1765 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 CEP104O60308 925 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 GDF11O95390 407 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 H2AFXP16104 143 aaPredicted RBP15.73■□□□□ 0.11
CACNB3-209ENST00000548860 GFPT1Q06210 699 aaPredicted RBP15.73■□□□□ 0.11
CACNB3-209ENST00000548860 DBNDD1Q9H9R9 158 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 LUC7LQ9NQ29 371 aaKnown RBP15.73■□□□□ 0.11
CACNB3-209ENST00000548860 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.73■□□□□ 0.11
CACNB3-209ENST00000548860 CNTNAP5Q8WYK1 1306 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 GOLGA6CA6NDK9 693 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 H3BQF6 201 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 RNF40O75150 1001 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 GOLGA6DP0CG33 693 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 STAT3P40763 770 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 MKRN4PQ13434 485 aaPredicted RBP15.73■□□□□ 0.11
CACNB3-209ENST00000548860 PPP2R5BQ15173 497 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 ZNF579Q8NAF0 562 aaKnown RBP15.73■□□□□ 0.11
CACNB3-209ENST00000548860 GOLGA6AQ9NYA3 693 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 ADAMTS1Q9UHI8 967 aa15.73■□□□□ 0.11
CACNB3-209ENST00000548860 CCDC151A5D8V7 595 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 BRD3Q15059 726 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 RIC1Q4ADV7 1423 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 KRT25Q7Z3Z0 450 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 GPBP1Q86WP2 473 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 MS4A14Q96JA4 679 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 SH2D3AQ9BRG2 576 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 MST1RQ04912 1400 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.72■□□□□ 0.11
CACNB3-209ENST00000548860 HSF2BPO75031 334 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 ARHGAP44Q17R89 818 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 ARHGEF1Q92888 912 aaKnown RBP15.72■□□□□ 0.11
CACNB3-209ENST00000548860 WDR19Q8NEZ3 1342 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 E9PMD0 336 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 KIAA0754O94854 1291 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 CFBP00751 764 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 HOXA13P31271 388 aaPredicted RBP15.72■□□□□ 0.11
CACNB3-209ENST00000548860 MDM2Q00987 491 aaPredicted RBP15.72■□□□□ 0.11
CACNB3-209ENST00000548860 IFFO1Q0D2I5 559 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 KLHL30Q0D2K2 578 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 RBM26Q5T8P6 1007 aaKnown RBP15.72■□□□□ 0.11
CACNB3-209ENST00000548860 IPO4Q8TEX9 1081 aaKnown RBP15.72■□□□□ 0.11
CACNB3-209ENST00000548860 BRIP1Q9BX63 1249 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 HAUS4Q9H6D7 363 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 PNPLA7Q6ZV29 1317 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 FGFR1OPO95684 399 aaKnown RBP15.72■□□□□ 0.11
CACNB3-209ENST00000548860 HLA-DOAP06340 250 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 KIAA0753Q2KHM9 967 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 EHBP1Q8NDI1 1231 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 PCDHA6Q9UN73 950 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 PCDHA8Q9Y5H6 950 aa15.72■□□□□ 0.11
CACNB3-209ENST00000548860 FANCGO15287 622 aa15.71■□□□□ 0.11
CACNB3-209ENST00000548860 TBCAO75347 108 aaKnown RBP15.71■□□□□ 0.11
CACNB3-209ENST00000548860 ZNF18P17022 549 aa15.71■□□□□ 0.11
CACNB3-209ENST00000548860 GUCY2DQ02846 1103 aa15.71■□□□□ 0.11
CACNB3-209ENST00000548860 FAM133AQ8N9E0 248 aa15.71■□□□□ 0.11
CACNB3-209ENST00000548860 VEZTQ9HBM0 779 aa15.71■□□□□ 0.11
CACNB3-209ENST00000548860 EZH2Q15910 746 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms