RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 AFF3P51826 1226 aaKnown RBP6.88□□□□□ -1.31
CCDC38-206ENST00000548771 VMACQ2NL98 169 aa6.88□□□□□ -1.31
CCDC38-206ENST00000548771 CNKSR3Q6P9H4 555 aa6.88□□□□□ -1.31
CCDC38-206ENST00000548771 GBP3Q9H0R5 595 aa6.88□□□□□ -1.31
CCDC38-206ENST00000548771 BUB1BO60566 1050 aaPredicted RBP6.87□□□□□ -1.31
CCDC38-206ENST00000548771 PPM1BO75688 479 aa6.87□□□□□ -1.31
CCDC38-206ENST00000548771 ATF4P18848 351 aaPredicted RBP6.87□□□□□ -1.31
CCDC38-206ENST00000548771 NCKAP1LP55160 1127 aa6.87□□□□□ -1.31
CCDC38-206ENST00000548771 ZDHHC14Q8IZN3 488 aa6.87□□□□□ -1.31
CCDC38-206ENST00000548771 TP53I13Q8NBR0 393 aaPredicted RBP6.87□□□□□ -1.31
CCDC38-206ENST00000548771 CXorf38Q8TB03 319 aa6.87□□□□□ -1.31
CCDC38-206ENST00000548771 FEZF2Q8TBJ5 459 aa6.87□□□□□ -1.31
CCDC38-206ENST00000548771 FBLN5Q9UBX5 448 aa6.87□□□□□ -1.31
CCDC38-206ENST00000548771 APEX2Q9UBZ4 518 aa6.87□□□□□ -1.31
CCDC38-206ENST00000548771 STRIP2Q9ULQ0 834 aa6.87□□□□□ -1.31
CCDC38-206ENST00000548771 A0A1W2PQ27 194 aa6.86□□□□□ -1.31
CCDC38-206ENST00000548771 A0A1W2PQ64 194 aa6.86□□□□□ -1.31
CCDC38-206ENST00000548771 A0A1W2PQC6 194 aa6.86□□□□□ -1.31
CCDC38-206ENST00000548771 A0A1W2PQD8 194 aa6.86□□□□□ -1.31
CCDC38-206ENST00000548771 C2orf71A6NGG8 1288 aa6.86□□□□□ -1.31
CCDC38-206ENST00000548771 ZNF200P98182 395 aaPredicted RBP6.86□□□□□ -1.31
CCDC38-206ENST00000548771 KIAA1211LQ6NV74 962 aa6.86□□□□□ -1.31
CCDC38-206ENST00000548771 COPS5Q92905 334 aa6.86□□□□□ -1.31
CCDC38-206ENST00000548771 MTA3Q9BTC8 594 aa6.86□□□□□ -1.31
CCDC38-206ENST00000548771 BACE2Q9Y5Z0 518 aa6.86□□□□□ -1.31
CCDC38-206ENST00000548771 ANKRD34BA5PLL1 514 aa6.85□□□□□ -1.31
CCDC38-206ENST00000548771 STXBP3O00186 592 aa6.85□□□□□ -1.31
CCDC38-206ENST00000548771 ZNF143P52747 638 aaPredicted RBP6.85□□□□□ -1.31
CCDC38-206ENST00000548771 AMPD2Q01433 879 aa6.85□□□□□ -1.31
CCDC38-206ENST00000548771 CYP4F3Q08477 520 aa6.85□□□□□ -1.31
CCDC38-206ENST00000548771 PPP2R5EQ16537 467 aa6.85□□□□□ -1.31
CCDC38-206ENST00000548771 DPY19L1Q2PZI1 675 aa6.85□□□□□ -1.31
CCDC38-206ENST00000548771 VHLLQ6RSH7 139 aa6.85□□□□□ -1.31
CCDC38-206ENST00000548771 ADAT2Q7Z6V5 191 aaKnown RBP6.85□□□□□ -1.31
CCDC38-206ENST00000548771 LINC01356Q8N9X3 169 aa6.85□□□□□ -1.31
CCDC38-206ENST00000548771 EMC9Q9Y3B6 208 aa6.85□□□□□ -1.31
CCDC38-206ENST00000548771 ATF2P15336 505 aa6.84□□□□□ -1.31
CCDC38-206ENST00000548771 PRR5P85299 388 aa6.84□□□□□ -1.31
CCDC38-206ENST00000548771 BICRALQ6AI39 1079 aa6.84□□□□□ -1.31
CCDC38-206ENST00000548771 SYT8Q8NBV8 401 aa6.84□□□□□ -1.31
CCDC38-206ENST00000548771 PWWP2AQ96N64 755 aa6.84□□□□□ -1.31
CCDC38-206ENST00000548771 INPP5FQ9Y2H2 1132 aa6.84□□□□□ -1.31
CCDC38-206ENST00000548771 ZC3H12DA2A288 527 aaKnown RBP6.83□□□□□ -1.32
CCDC38-206ENST00000548771 F8W031 263 aaPredicted RBP6.83□□□□□ -1.32
CCDC38-206ENST00000548771 FFAR3O14843 346 aa6.83□□□□□ -1.32
CCDC38-206ENST00000548771 TACR1P25103 407 aa6.83□□□□□ -1.32
CCDC38-206ENST00000548771 HTRA3P83110 453 aa6.83□□□□□ -1.32
CCDC38-206ENST00000548771 CPNE8Q86YQ8 564 aa6.83□□□□□ -1.32
CCDC38-206ENST00000548771 CPLX3Q8WVH0 158 aa6.83□□□□□ -1.32
CCDC38-206ENST00000548771 TSPAN17Q96FV3 270 aa6.83□□□□□ -1.32
CCDC38-206ENST00000548771 MRGPRX3Q96LB0 322 aa6.83□□□□□ -1.32
CCDC38-206ENST00000548771 MMP19Q99542 508 aa6.83□□□□□ -1.32
CCDC38-206ENST00000548771 ADAM7Q9H2U9 754 aa6.83□□□□□ -1.32
CCDC38-206ENST00000548771 C7orf72A4D263 438 aa6.82□□□□□ -1.32
CCDC38-206ENST00000548771 PLA2G1BP04054 148 aaKnown RBP6.82□□□□□ -1.32
CCDC38-206ENST00000548771 CELA3BP08861 270 aa6.82□□□□□ -1.32
CCDC38-206ENST00000548771 PFKLP17858 780 aa6.82□□□□□ -1.32
CCDC38-206ENST00000548771 PAMP19021 973 aa6.82□□□□□ -1.32
CCDC38-206ENST00000548771 SEPHS1P49903 392 aa6.82□□□□□ -1.32
CCDC38-206ENST00000548771 TARBP2Q15633 366 aaKnown RBP6.82□□□□□ -1.32
CCDC38-206ENST00000548771 VWA3BQ502W6 1294 aa6.82□□□□□ -1.32
CCDC38-206ENST00000548771 BVESQ8NE79 360 aa6.82□□□□□ -1.32
CCDC38-206ENST00000548771 APBA2Q99767 749 aa6.82□□□□□ -1.32
CCDC38-206ENST00000548771 RNF38Q9H0F5 515 aa6.82□□□□□ -1.32
CCDC38-206ENST00000548771 TMPRSS5Q9H3S3 457 aa6.82□□□□□ -1.32
CCDC38-206ENST00000548771 AKT3Q9Y243 479 aa6.82□□□□□ -1.32
CCDC38-206ENST00000548771 SASH1O94885 1247 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 ASGR2P07307 311 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 NCAM1P13591 858 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 LIMS1P48059 325 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 FOXO4P98177 505 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 MBLAC2Q68D91 279 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 TRIM59Q8IWR1 403 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 LZTR1Q8N653 840 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 NETO2Q8NC67 525 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 PLEKHO2Q8TD55 490 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 FNIP1Q8TF40 1166 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 DPF3Q92784 378 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 KRTAP9-8Q9BYQ0 159 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 LUC7LQ9NQ29 371 aaKnown RBP6.81□□□□□ -1.32
CCDC38-206ENST00000548771 CYP26B1Q9NR63 512 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.81□□□□□ -1.32
CCDC38-206ENST00000548771 SUGT1Q9Y2Z0 365 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 RWDD3Q9Y3V2 267 aa6.81□□□□□ -1.32
CCDC38-206ENST00000548771 TRBV23OR9-2A0A075B6M9 112 aa6.8□□□□□ -1.32
CCDC38-206ENST00000548771 NPHP3-ACAD11A0A0J9YXS1 232 aa6.8□□□□□ -1.32
CCDC38-206ENST00000548771 A0A1W2PQJ5 194 aa6.8□□□□□ -1.32
CCDC38-206ENST00000548771 ARNTLO00327 626 aa6.8□□□□□ -1.32
CCDC38-206ENST00000548771 CAPNS1P04632 268 aa6.8□□□□□ -1.32
CCDC38-206ENST00000548771 DLX2Q07687 328 aaPredicted RBP6.8□□□□□ -1.32
CCDC38-206ENST00000548771 NCAPHQ15003 741 aa6.8□□□□□ -1.32
CCDC38-206ENST00000548771 CCSER2Q9H7U1 834 aa6.8□□□□□ -1.32
CCDC38-206ENST00000548771 KCNH1O95259 989 aa6.79□□□□□ -1.32
CCDC38-206ENST00000548771 ADRB1P08588 477 aa6.79□□□□□ -1.32
CCDC38-206ENST00000548771 GTF2IRD2BQ6EKJ0 949 aa6.79□□□□□ -1.32
CCDC38-206ENST00000548771 POMZP3Q6PJE2 187 aa6.79□□□□□ -1.32
CCDC38-206ENST00000548771 SAPCD2Q86UD0 394 aa6.79□□□□□ -1.32
CCDC38-206ENST00000548771 GTF2IRD2Q86UP8 949 aa6.79□□□□□ -1.32
CCDC38-206ENST00000548771 CPA5Q8WXQ8 436 aa6.79□□□□□ -1.32
CCDC38-206ENST00000548771 ANAPC16Q96DE5 110 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms