RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 CPVLQ9H3G5 476 aa20.41■□□□□ 0.86
CHMP1A-205ENST00000548650 Q9Y3F1 56 aa20.41■□□□□ 0.86
CHMP1A-205ENST00000548650 SCN10AQ9Y5Y9 1956 aa20.41■□□□□ 0.86
CHMP1A-205ENST00000548650 B4E1Z4 1266 aa20.4■□□□□ 0.86
CHMP1A-205ENST00000548650 GRIN2DO15399 1336 aa20.4■□□□□ 0.86
CHMP1A-205ENST00000548650 DYNC1LI2O43237 492 aaPredicted RBP20.4■□□□□ 0.86
CHMP1A-205ENST00000548650 CALML3P27482 149 aa20.4■□□□□ 0.86
CHMP1A-205ENST00000548650 PDE4AP27815 886 aa20.4■□□□□ 0.86
CHMP1A-205ENST00000548650 DUSP28Q4G0W2 176 aa20.4■□□□□ 0.86
CHMP1A-205ENST00000548650 RNF207Q6ZRF8 634 aa20.4■□□□□ 0.86
CHMP1A-205ENST00000548650 IQCA1Q86XH1 822 aa20.4■□□□□ 0.86
CHMP1A-205ENST00000548650 ANKS1AQ92625 1134 aa20.4■□□□□ 0.86
CHMP1A-205ENST00000548650 TTYH1Q9H313 450 aaPredicted RBP20.4■□□□□ 0.86
CHMP1A-205ENST00000548650 TLR3O15455 904 aaKnown RBP20.39■□□□□ 0.85
CHMP1A-205ENST00000548650 GSPT1P15170 499 aaKnown RBP20.39■□□□□ 0.85
CHMP1A-205ENST00000548650 EDNRBP24530 442 aa20.39■□□□□ 0.85
CHMP1A-205ENST00000548650 RPS6P62753 249 aaKnown RBP20.39■□□□□ 0.85
CHMP1A-205ENST00000548650 KIAA1211Q6ZU35 1233 aa20.39■□□□□ 0.85
CHMP1A-205ENST00000548650 ENAHQ8N8S7 591 aaPredicted RBP20.39■□□□□ 0.85
CHMP1A-205ENST00000548650 ZSCAN10Q96SZ4 725 aaPredicted RBP20.39■□□□□ 0.85
CHMP1A-205ENST00000548650 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.39■□□□□ 0.851e-8■■□□□ 11.9
CHMP1A-205ENST00000548650 PPP1R12CQ9BZL4 782 aa20.39■□□□□ 0.85
CHMP1A-205ENST00000548650 KIAA1217Q5T5P2 1943 aa20.39■□□□□ 0.85
CHMP1A-205ENST00000548650 TNKSO95271 1327 aa20.38■□□□□ 0.85
CHMP1A-205ENST00000548650 RBM47A0AV96 593 aaKnown RBP20.38■□□□□ 0.85
CHMP1A-205ENST00000548650 PPIGQ13427 754 aaKnown RBP eCLIP20.38■□□□□ 0.859e-10■■■■□ 23.3
CHMP1A-205ENST00000548650 ITGA7Q13683 1181 aa20.38■□□□□ 0.85
CHMP1A-205ENST00000548650 CDC37Q16543 378 aaPredicted RBP20.38■□□□□ 0.85
CHMP1A-205ENST00000548650 IMMTQ16891 758 aaKnown RBP20.38■□□□□ 0.85
CHMP1A-205ENST00000548650 USH1GQ495M9 461 aa20.38■□□□□ 0.85
CHMP1A-205ENST00000548650 CCDC178Q5BJE1 867 aa20.38■□□□□ 0.85
CHMP1A-205ENST00000548650 CDX2Q99626 313 aaPredicted RBP20.38■□□□□ 0.85
CHMP1A-205ENST00000548650 UBA5Q9GZZ9 404 aa20.38■□□□□ 0.85
CHMP1A-205ENST00000548650 SEMA6BQ9H3T3 888 aa20.38■□□□□ 0.85
CHMP1A-205ENST00000548650 KAT14Q9H8E8 782 aa20.38■□□□□ 0.85
CHMP1A-205ENST00000548650 GBF1Q92538 1859 aa20.37■□□□□ 0.85
CHMP1A-205ENST00000548650 TANC1Q9C0D5 1861 aa20.37■□□□□ 0.85
CHMP1A-205ENST00000548650 ZEB2O60315 1214 aa20.37■□□□□ 0.85
CHMP1A-205ENST00000548650 CSF2RAP15509 400 aa20.37■□□□□ 0.85
CHMP1A-205ENST00000548650 ASPRV1Q53RT3 343 aa20.37■□□□□ 0.85
CHMP1A-205ENST00000548650 TTC22Q5TAA0 569 aa20.37■□□□□ 0.85
CHMP1A-205ENST00000548650 C16orf59Q7L2K0 433 aa20.37■□□□□ 0.85
CHMP1A-205ENST00000548650 WDR11Q9BZH6 1224 aa20.37■□□□□ 0.85
CHMP1A-205ENST00000548650 CTNNA3Q9UI47 895 aa20.37■□□□□ 0.85
CHMP1A-205ENST00000548650 UNC80Q8N2C7 3258 aa20.37■□□□□ 0.85
CHMP1A-205ENST00000548650 UMODL1Q5DID0 1318 aa20.36■□□□□ 0.85
CHMP1A-205ENST00000548650 RAD50Q92878 1312 aa20.36■□□□□ 0.85
CHMP1A-205ENST00000548650 TMEM265A0A087WTH1 108 aa20.36■□□□□ 0.85
CHMP1A-205ENST00000548650 PSMC6P62333 389 aa20.36■□□□□ 0.85
CHMP1A-205ENST00000548650 TMEM240Q5SV17 173 aa20.36■□□□□ 0.85
CHMP1A-205ENST00000548650 RASIP1Q5U651 963 aa20.36■□□□□ 0.85
CHMP1A-205ENST00000548650 TMEM199Q8N511 208 aa20.36■□□□□ 0.85
CHMP1A-205ENST00000548650 DNERQ8NFT8 737 aa20.36■□□□□ 0.85
CHMP1A-205ENST00000548650 ZSWIM5Q9P217 1185 aa20.36■□□□□ 0.85
CHMP1A-205ENST00000548650 SUPT16HQ9Y5B9 1047 aaKnown RBP20.36■□□□□ 0.85
CHMP1A-205ENST00000548650 B4GALT4O60513 344 aa20.35■□□□□ 0.85
CHMP1A-205ENST00000548650 CYP2C18P33260 490 aa20.35■□□□□ 0.85
CHMP1A-205ENST00000548650 PDE4DQ08499 809 aa20.35■□□□□ 0.85
CHMP1A-205ENST00000548650 ADGRF4Q8IZF3 695 aa20.35■□□□□ 0.85
CHMP1A-205ENST00000548650 RGS22Q8NE09 1264 aa20.35■□□□□ 0.85
CHMP1A-205ENST00000548650 SEZ6LQ9BYH1 1024 aa20.35■□□□□ 0.85
CHMP1A-205ENST00000548650 KRT23Q9C075 422 aa20.35■□□□□ 0.85
CHMP1A-205ENST00000548650 HIPK3Q9H422 1215 aa20.35■□□□□ 0.85
CHMP1A-205ENST00000548650 CNNM2Q9H8M5 875 aa20.35■□□□□ 0.85
CHMP1A-205ENST00000548650 EYSQ5T1H1 3165 aa20.35■□□□□ 0.85
CHMP1A-205ENST00000548650 ABCB11O95342 1321 aa20.34■□□□□ 0.85
CHMP1A-205ENST00000548650 DNAJB2P25686 324 aa20.34■□□□□ 0.85
CHMP1A-205ENST00000548650 PURAQ00577 322 aaKnown RBP20.34■□□□□ 0.85
CHMP1A-205ENST00000548650 PPP2R5BQ15173 497 aa20.34■□□□□ 0.85
CHMP1A-205ENST00000548650 PSRC1Q6PGN9 363 aaPredicted RBP20.34■□□□□ 0.85
CHMP1A-205ENST00000548650 MPHOSPH6Q99547 160 aaKnown RBP20.34■□□□□ 0.85
CHMP1A-205ENST00000548650 UBAC1Q9BSL1 405 aa20.34■□□□□ 0.85
CHMP1A-205ENST00000548650 NOC4LQ9BVI4 516 aaKnown RBP20.34■□□□□ 0.85
CHMP1A-205ENST00000548650 TRPV6Q9H1D0 765 aa20.34■□□□□ 0.85
CHMP1A-205ENST00000548650 A0A0C4DFX4 3053 aa20.34■□□□□ 0.85
CHMP1A-205ENST00000548650 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.33■□□□□ 0.85
CHMP1A-205ENST00000548650 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.33■□□□□ 0.85
CHMP1A-205ENST00000548650 DLL1O00548 723 aa20.33■□□□□ 0.85
CHMP1A-205ENST00000548650 ACRP10323 421 aa20.33■□□□□ 0.85
CHMP1A-205ENST00000548650 CPT1AP50416 773 aa20.33■□□□□ 0.85
CHMP1A-205ENST00000548650 SEC23AQ15436 765 aa20.33■□□□□ 0.85
CHMP1A-205ENST00000548650 QRICH1Q2TAL8 776 aa20.33■□□□□ 0.85
CHMP1A-205ENST00000548650 OR6J1Q8NGC5 347 aa20.33■□□□□ 0.85
CHMP1A-205ENST00000548650 SCFD2Q8WU76 684 aa20.33■□□□□ 0.85
CHMP1A-205ENST00000548650 MYLIPQ8WY64 445 aa20.33■□□□□ 0.85
CHMP1A-205ENST00000548650 MAF1Q9H063 256 aa20.33■□□□□ 0.85
CHMP1A-205ENST00000548650 WNT8AQ9H1J5 351 aa20.33■□□□□ 0.85
CHMP1A-205ENST00000548650 ALDH8A1Q9H2A2 487 aaPredicted RBP20.33■□□□□ 0.85
CHMP1A-205ENST00000548650 POLR3EQ9NVU0 708 aa20.33■□□□□ 0.85
CHMP1A-205ENST00000548650 COL20A1Q9P218 1284 aa20.33■□□□□ 0.85
CHMP1A-205ENST00000548650 NKRFO15226 690 aaKnown RBP eCLIP20.32■□□□□ 0.84
CHMP1A-205ENST00000548650 PARP1P09874 1014 aaKnown RBP20.32■□□□□ 0.84
CHMP1A-205ENST00000548650 ZNF365Q70YC5 407 aa20.32■□□□□ 0.84
CHMP1A-205ENST00000548650 SYTL5Q8TDW5 730 aaPredicted RBP20.32■□□□□ 0.84
CHMP1A-205ENST00000548650 TBC1D5Q92609 795 aa20.32■□□□□ 0.84
CHMP1A-205ENST00000548650 JMJD4Q9H9V9 463 aa20.32■□□□□ 0.84
CHMP1A-205ENST00000548650 IL23AQ9NPF7 189 aa20.32■□□□□ 0.84
CHMP1A-205ENST00000548650 SCN5AQ14524 2016 aa20.32■□□□□ 0.84
CHMP1A-205ENST00000548650 ARIH2O95376 493 aa20.31■□□□□ 0.84
CHMP1A-205ENST00000548650 MYL3P08590 195 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms