RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 MORC4Q8TE76 937 aa19.47■□□□□ 0.71
SSH1-208ENST00000548522 ALDH8A1Q9H2A2 487 aaPredicted RBP19.47■□□□□ 0.71
SSH1-208ENST00000548522 VTA1Q9NP79 307 aa19.47■□□□□ 0.71
SSH1-208ENST00000548522 THEGQ9P2T0 379 aa19.47■□□□□ 0.71
SSH1-208ENST00000548522 GBF1Q92538 1859 aa19.46■□□□□ 0.71
SSH1-208ENST00000548522 TNFRSF10AO00220 468 aa19.46■□□□□ 0.71
SSH1-208ENST00000548522 CYP2C9P11712 490 aa19.46■□□□□ 0.71
SSH1-208ENST00000548522 ALDH5A1P51649 535 aaPredicted RBP19.46■□□□□ 0.71
SSH1-208ENST00000548522 ANAPC4Q9UJX5 808 aa19.46■□□□□ 0.71
SSH1-208ENST00000548522 BDP1A6H8Y1 2624 aa19.46■□□□□ 0.71
SSH1-208ENST00000548522 ZEB2O60315 1214 aa19.45■□□□□ 0.7
SSH1-208ENST00000548522 TTLL4Q14679 1199 aa19.45■□□□□ 0.7
SSH1-208ENST00000548522 DUSP28Q4G0W2 176 aa19.45■□□□□ 0.7
SSH1-208ENST00000548522 PPP4R3BQ5MIZ7 849 aa19.45■□□□□ 0.7
SSH1-208ENST00000548522 SYDE2Q5VT97 1194 aa19.45■□□□□ 0.7
SSH1-208ENST00000548522 DCAF4Q8WV16 495 aa19.45■□□□□ 0.7
SSH1-208ENST00000548522 MTIF3Q9H2K0 278 aaKnown RBP19.45■□□□□ 0.7
SSH1-208ENST00000548522 SLC28A3Q9HAS3 691 aa19.45■□□□□ 0.7
SSH1-208ENST00000548522 GPCPD1Q9NPB8 672 aa19.45■□□□□ 0.7
SSH1-208ENST00000548522 Q9Y3F1 56 aa19.45■□□□□ 0.7
SSH1-208ENST00000548522 TRANK1O15050 2925 aa19.45■□□□□ 0.7
SSH1-208ENST00000548522 RBAK-RBAKDNI3L0D1 243 aa19.44■□□□□ 0.7
SSH1-208ENST00000548522 ORC4O43929 436 aa19.44■□□□□ 0.7
SSH1-208ENST00000548522 PURAQ00577 322 aaKnown RBP19.44■□□□□ 0.7
SSH1-208ENST00000548522 RRP12Q5JTH9 1297 aaKnown RBP19.44■□□□□ 0.7
SSH1-208ENST00000548522 PPP2R2DQ66LE6 453 aa19.44■□□□□ 0.7
SSH1-208ENST00000548522 ATXN2LQ8WWM7 1075 aaKnown RBP19.44■□□□□ 0.7
SSH1-208ENST00000548522 CLEC4DQ8WXI8 215 aa19.44■□□□□ 0.7
SSH1-208ENST00000548522 FAM227BQ96M60 508 aa19.44■□□□□ 0.7
SSH1-208ENST00000548522 ASB2Q96Q27 587 aa19.44■□□□□ 0.7
SSH1-208ENST00000548522 TMEM47Q9BQJ4 181 aa19.44■□□□□ 0.7
SSH1-208ENST00000548522 WDR11Q9BZH6 1224 aa19.44■□□□□ 0.7
SSH1-208ENST00000548522 MYO9BQ13459 2157 aa19.44■□□□□ 0.7
SSH1-208ENST00000548522 A0A0D9SFI3 127 aa19.43■□□□□ 0.7
SSH1-208ENST00000548522 PTPDC1A2A3K4 754 aa19.43■□□□□ 0.7
SSH1-208ENST00000548522 ZBBXA8MT70 800 aa19.43■□□□□ 0.7
SSH1-208ENST00000548522 MYL3P08590 195 aa19.43■□□□□ 0.7
SSH1-208ENST00000548522 FGRP09769 529 aa19.43■□□□□ 0.7
SSH1-208ENST00000548522 CALML3P27482 149 aa19.43■□□□□ 0.7
SSH1-208ENST00000548522 BTNL9Q6UXG8 535 aa19.43■□□□□ 0.7
SSH1-208ENST00000548522 ADAMTS19Q8TE59 1207 aa19.43■□□□□ 0.7
SSH1-208ENST00000548522 TOMM22Q9NS69 142 aa19.43■□□□□ 0.7
SSH1-208ENST00000548522 RAPGEFL1Q9UHV5 662 aa19.43■□□□□ 0.7
SSH1-208ENST00000548522 SLC4A7Q9Y6M7 1214 aa19.43■□□□□ 0.7
SSH1-208ENST00000548522 TNKSO95271 1327 aa19.43■□□□□ 0.7
SSH1-208ENST00000548522 DEFB128Q7Z7B8 93 aa19.42■□□□□ 0.7
SSH1-208ENST00000548522 MICALL1Q8N3F8 863 aa19.42■□□□□ 0.7
SSH1-208ENST00000548522 OR6J1Q8NGC5 347 aa19.42■□□□□ 0.7
SSH1-208ENST00000548522 COPS5Q92905 334 aa19.42■□□□□ 0.7
SSH1-208ENST00000548522 RBM47A0AV96 593 aaKnown RBP19.41■□□□□ 0.7
SSH1-208ENST00000548522 PDHBP11177 359 aa19.41■□□□□ 0.7
SSH1-208ENST00000548522 TOP1P11387 765 aaKnown RBP19.41■□□□□ 0.7
SSH1-208ENST00000548522 ATP2A2P16615 1042 aaKnown RBP19.41■□□□□ 0.7
SSH1-208ENST00000548522 HAND2P61296 217 aa19.41■□□□□ 0.7
SSH1-208ENST00000548522 ZNF589Q86UQ0 364 aaPredicted RBP19.41■□□□□ 0.7
SSH1-208ENST00000548522 NECAB3Q96P71 396 aaPredicted RBP19.41■□□□□ 0.7
SSH1-208ENST00000548522 ADD3Q9UEY8 706 aaKnown RBP19.41■□□□□ 0.7
SSH1-208ENST00000548522 RFXAPO00287 272 aa19.4■□□□□ 0.7
SSH1-208ENST00000548522 ARHGEF15O94989 841 aa19.4■□□□□ 0.7
SSH1-208ENST00000548522 FGAP02671 866 aa19.4■□□□□ 0.7
SSH1-208ENST00000548522 FAM47CQ5HY64 1035 aa19.4■□□□□ 0.7
SSH1-208ENST00000548522 SEZ6LQ9BYH1 1024 aa19.4■□□□□ 0.7
SSH1-208ENST00000548522 POLR3EQ9NVU0 708 aa19.4■□□□□ 0.7
SSH1-208ENST00000548522 PCDHA11Q9Y5I1 949 aa19.4■□□□□ 0.7
SSH1-208ENST00000548522 EPOPA6NHQ4 379 aa19.39■□□□□ 0.69
SSH1-208ENST00000548522 CA3P07451 260 aa19.39■□□□□ 0.69
SSH1-208ENST00000548522 CPT1AP50416 773 aa19.39■□□□□ 0.69
SSH1-208ENST00000548522 RPS6P62753 249 aaKnown RBP19.39■□□□□ 0.69
SSH1-208ENST00000548522 MRPS5P82675 430 aaKnown RBP19.39■□□□□ 0.69
SSH1-208ENST00000548522 TFF2Q03403 129 aa19.39■□□□□ 0.69
SSH1-208ENST00000548522 ALX1Q15699 326 aa19.39■□□□□ 0.69
SSH1-208ENST00000548522 NBPF20Q3BBV1 942 aa19.39■□□□□ 0.69
SSH1-208ENST00000548522 RNF207Q6ZRF8 634 aa19.39■□□□□ 0.69
SSH1-208ENST00000548522 TBC1D10CQ8IV04 446 aa19.39■□□□□ 0.69
SSH1-208ENST00000548522 RPUSD2Q8IZ73 545 aaKnown RBP19.39■□□□□ 0.69
SSH1-208ENST00000548522 EVI5LQ96CN4 794 aa19.39■□□□□ 0.69
SSH1-208ENST00000548522 UHRF1Q96T88 793 aaPredicted RBP19.39■□□□□ 0.69
SSH1-208ENST00000548522 MTG1Q9BT17 334 aaPredicted RBP19.39■□□□□ 0.69
SSH1-208ENST00000548522 CPVLQ9H3G5 476 aa19.39■□□□□ 0.69
SSH1-208ENST00000548522 CERS4Q9HA82 394 aa19.39■□□□□ 0.69
SSH1-208ENST00000548522 NCOR1O75376 2440 aa19.39■□□□□ 0.69
SSH1-208ENST00000548522 ARIH2O95376 493 aa19.38■□□□□ 0.69
SSH1-208ENST00000548522 COL9A1P20849 921 aa19.38■□□□□ 0.69
SSH1-208ENST00000548522 EDNRBP24530 442 aa19.38■□□□□ 0.69
SSH1-208ENST00000548522 ZNF543Q08ER8 600 aa19.38■□□□□ 0.69
SSH1-208ENST00000548522 SCN5AQ14524 2016 aa19.38■□□□□ 0.69
SSH1-208ENST00000548522 PPP2R5BQ15173 497 aa19.38■□□□□ 0.69
SSH1-208ENST00000548522 ANKRD45Q5TZF3 282 aa19.38■□□□□ 0.69
SSH1-208ENST00000548522 HELLSQ9NRZ9 838 aa19.38■□□□□ 0.69
SSH1-208ENST00000548522 HSPD1P10809 573 aaKnown RBP19.37■□□□□ 0.69
SSH1-208ENST00000548522 PDE1AP54750 535 aa19.37■□□□□ 0.69
SSH1-208ENST00000548522 PDE4DQ08499 809 aa19.37■□□□□ 0.69
SSH1-208ENST00000548522 NMIQ13287 307 aaPredicted RBP19.37■□□□□ 0.69
SSH1-208ENST00000548522 KRT40Q6A162 431 aa19.37■□□□□ 0.69
SSH1-208ENST00000548522 SPRED2Q7Z698 418 aa19.37■□□□□ 0.69
SSH1-208ENST00000548522 TCP11L1Q9NUJ3 509 aa19.37■□□□□ 0.69
SSH1-208ENST00000548522 SCN10AQ9Y5Y9 1956 aa19.37■□□□□ 0.69
SSH1-208ENST00000548522 NEDD4P46934 1319 aa19.36■□□□□ 0.69
SSH1-208ENST00000548522 SUPT20HL2P0C7V6 817 aa19.36■□□□□ 0.69
SSH1-208ENST00000548522 GOLGA8HP0CJ92 632 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms