RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 DNAJB2P25686 324 aa17.94■□□□□ 0.46
SNX29P1-201ENST00000548357 ALDH5A1P51649 535 aaPredicted RBP17.94■□□□□ 0.46
SNX29P1-201ENST00000548357 GRIN2CQ14957 1233 aa17.94■□□□□ 0.46
SNX29P1-201ENST00000548357 PLEKHM2Q8IWE5 1019 aa17.94■□□□□ 0.46
SNX29P1-201ENST00000548357 VWCEQ96DN2 955 aa17.94■□□□□ 0.46
SNX29P1-201ENST00000548357 YTHDC1Q96MU7 727 aaKnown RBP17.94■□□□□ 0.46
SNX29P1-201ENST00000548357 ZBTB47Q9UFB7 747 aaPredicted RBP17.94■□□□□ 0.46
SNX29P1-201ENST00000548357 MROH7Q68CQ1 1323 aa17.94■□□□□ 0.46
SNX29P1-201ENST00000548357 DOCK5Q9H7D0 1870 aa17.93■□□□□ 0.46
SNX29P1-201ENST00000548357 GOLGA8HP0CJ92 632 aa17.93■□□□□ 0.46
SNX29P1-201ENST00000548357 SDSP20132 328 aa17.93■□□□□ 0.46
SNX29P1-201ENST00000548357 ZNF543Q08ER8 600 aa17.93■□□□□ 0.46
SNX29P1-201ENST00000548357 PPP4R3BQ5MIZ7 849 aa17.93■□□□□ 0.46
SNX29P1-201ENST00000548357 AKNAD1Q5T1N1 836 aa17.93■□□□□ 0.46
SNX29P1-201ENST00000548357 RASIP1Q5U651 963 aa17.93■□□□□ 0.46
SNX29P1-201ENST00000548357 USP38Q8NB14 1042 aa17.93■□□□□ 0.46
SNX29P1-201ENST00000548357 EXOC6Q8TAG9 804 aa17.93■□□□□ 0.46
SNX29P1-201ENST00000548357 TRPV6Q9H1D0 765 aa17.93■□□□□ 0.46
SNX29P1-201ENST00000548357 WNT8AQ9H1J5 351 aa17.93■□□□□ 0.46
SNX29P1-201ENST00000548357 IL25Q9H293 177 aa17.93■□□□□ 0.46
SNX29P1-201ENST00000548357 PTPDC1A2A3K4 754 aa17.92■□□□□ 0.46
SNX29P1-201ENST00000548357 B4GALT4O60513 344 aa17.92■□□□□ 0.46
SNX29P1-201ENST00000548357 SNHG28P0DPA3 235 aa17.92■□□□□ 0.46
SNX29P1-201ENST00000548357 ITGA7Q13683 1181 aa17.92■□□□□ 0.46
SNX29P1-201ENST00000548357 KIAA1211Q6ZU35 1233 aa17.92■□□□□ 0.46
SNX29P1-201ENST00000548357 ZNF365Q70YC5 407 aa17.92■□□□□ 0.46
SNX29P1-201ENST00000548357 VTA1Q9NP79 307 aa17.92■□□□□ 0.46
SNX29P1-201ENST00000548357 CXXC1Q9P0U4 656 aaPredicted RBP17.92■□□□□ 0.46
SNX29P1-201ENST00000548357 FOSL2P15408 326 aa17.91■□□□□ 0.46
SNX29P1-201ENST00000548357 CALML3P27482 149 aa17.91■□□□□ 0.46
SNX29P1-201ENST00000548357 PPIGQ13427 754 aaKnown RBP eCLIP17.91■□□□□ 0.46
SNX29P1-201ENST00000548357 COPS5Q92905 334 aa17.91■□□□□ 0.46
SNX29P1-201ENST00000548357 PBX4Q9BYU1 374 aa17.91■□□□□ 0.46
SNX29P1-201ENST00000548357 UBA5Q9GZZ9 404 aa17.91■□□□□ 0.46
SNX29P1-201ENST00000548357 TTC28Q96AY4 2481 aa17.91■□□□□ 0.46
SNX29P1-201ENST00000548357 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.9■□□□□ 0.46
SNX29P1-201ENST00000548357 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.9■□□□□ 0.46
SNX29P1-201ENST00000548357 CCL23P55773 120 aa17.9■□□□□ 0.46
SNX29P1-201ENST00000548357 DUSP28Q4G0W2 176 aa17.9■□□□□ 0.46
SNX29P1-201ENST00000548357 IQSEC1Q6DN90 963 aa17.9■□□□□ 0.46
SNX29P1-201ENST00000548357 MFSD6Q6ZSS7 791 aa17.9■□□□□ 0.46
SNX29P1-201ENST00000548357 CHD1LQ86WJ1 897 aa17.9■□□□□ 0.46
SNX29P1-201ENST00000548357 TBC1D5Q92609 795 aa17.9■□□□□ 0.46
SNX29P1-201ENST00000548357 NOC4LQ9BVI4 516 aaKnown RBP17.9■□□□□ 0.46
SNX29P1-201ENST00000548357 AP5M1Q9H0R1 490 aa17.9■□□□□ 0.46
SNX29P1-201ENST00000548357 MUC3AQ02505 3323 aa17.9■□□□□ 0.46
SNX29P1-201ENST00000548357 RBM47A0AV96 593 aaKnown RBP17.89■□□□□ 0.45
SNX29P1-201ENST00000548357 TLR3O15455 904 aaKnown RBP17.89■□□□□ 0.45
SNX29P1-201ENST00000548357 ARIH2O95376 493 aa17.89■□□□□ 0.45
SNX29P1-201ENST00000548357 RPS6P62753 249 aaKnown RBP17.89■□□□□ 0.45
SNX29P1-201ENST00000548357 NUCB1Q02818 461 aa17.89■□□□□ 0.45
SNX29P1-201ENST00000548357 USH1GQ495M9 461 aa17.89■□□□□ 0.45
SNX29P1-201ENST00000548357 CWC27Q6UX04 472 aaKnown RBP17.89■□□□□ 0.45
SNX29P1-201ENST00000548357 HIPK3Q9H422 1215 aa17.89■□□□□ 0.45
SNX29P1-201ENST00000548357 ZNF576Q9H609 170 aa17.89■□□□□ 0.45
SNX29P1-201ENST00000548357 IL23AQ9NPF7 189 aa17.89■□□□□ 0.45
SNX29P1-201ENST00000548357 TRMT13Q9NUP7 481 aaKnown RBP17.89■□□□□ 0.45
SNX29P1-201ENST00000548357 TMEM265A0A087WTH1 108 aa17.88■□□□□ 0.45
SNX29P1-201ENST00000548357 EDNRBP24530 442 aa17.88■□□□□ 0.45
SNX29P1-201ENST00000548357 RNF207Q6ZRF8 634 aa17.88■□□□□ 0.45
SNX29P1-201ENST00000548357 TMEM199Q8N511 208 aa17.88■□□□□ 0.45
SNX29P1-201ENST00000548357 TIFAQ96CG3 184 aa17.88■□□□□ 0.45
SNX29P1-201ENST00000548357 SCLYQ96I15 445 aa17.88■□□□□ 0.45
SNX29P1-201ENST00000548357 WDR11Q9BZH6 1224 aa17.88■□□□□ 0.45
SNX29P1-201ENST00000548357 OSBPL3Q9H4L5 887 aa17.88■□□□□ 0.45
SNX29P1-201ENST00000548357 PRDM6Q9NQX0 595 aa17.88■□□□□ 0.45
SNX29P1-201ENST00000548357 COL20A1Q9P218 1284 aa17.88■□□□□ 0.45
SNX29P1-201ENST00000548357 YBX2Q9Y2T7 364 aaKnown RBP17.88■□□□□ 0.45
SNX29P1-201ENST00000548357 B4E1Z4 1266 aa17.87■□□□□ 0.45
SNX29P1-201ENST00000548357 KDM4AO75164 1064 aa17.87■□□□□ 0.45
SNX29P1-201ENST00000548357 CABYRO75952 493 aa17.87■□□□□ 0.45
SNX29P1-201ENST00000548357 CYP2C9P11712 490 aa17.87■□□□□ 0.45
SNX29P1-201ENST00000548357 PURAQ00577 322 aaKnown RBP17.87■□□□□ 0.45
SNX29P1-201ENST00000548357 ALDH8A1Q9H2A2 487 aaPredicted RBP17.87■□□□□ 0.45
SNX29P1-201ENST00000548357 Q9Y3F1 56 aa17.87■□□□□ 0.45
SNX29P1-201ENST00000548357 TCF20Q9UGU0 1960 aaKnown RBP17.87■□□□□ 0.45
SNX29P1-201ENST00000548357 WDR19Q8NEZ3 1342 aa17.87■□□□□ 0.45
SNX29P1-201ENST00000548357 MYL3P08590 195 aa17.86■□□□□ 0.45
SNX29P1-201ENST00000548357 PDE4AP27815 886 aa17.86■□□□□ 0.45
SNX29P1-201ENST00000548357 PSRC1Q6PGN9 363 aaPredicted RBP17.86■□□□□ 0.45
SNX29P1-201ENST00000548357 OTOP2Q7RTS6 562 aa17.86■□□□□ 0.45
SNX29P1-201ENST00000548357 PNMA1Q8ND90 353 aa17.86■□□□□ 0.45
SNX29P1-201ENST00000548357 OR6J1Q8NGC5 347 aa17.86■□□□□ 0.45
SNX29P1-201ENST00000548357 HERVK_113Q902F9 699 aa17.86■□□□□ 0.45
SNX29P1-201ENST00000548357 TTC14Q96N46 770 aa17.86■□□□□ 0.45
SNX29P1-201ENST00000548357 ADD3Q9UEY8 706 aaKnown RBP17.86■□□□□ 0.45
SNX29P1-201ENST00000548357 COL4A4P53420 1690 aaPredicted RBP17.86■□□□□ 0.45
SNX29P1-201ENST00000548357 RABGGTBP53611 331 aa17.85■□□□□ 0.45
SNX29P1-201ENST00000548357 CDC37Q16543 378 aaPredicted RBP17.85■□□□□ 0.45
SNX29P1-201ENST00000548357 TICAM2Q86XR7 235 aa17.85■□□□□ 0.45
SNX29P1-201ENST00000548357 ENAHQ8N8S7 591 aaPredicted RBP17.85■□□□□ 0.45
SNX29P1-201ENST00000548357 ESR2Q92731 530 aa17.85■□□□□ 0.45
SNX29P1-201ENST00000548357 NKX2-4Q9H2Z4 354 aa17.85■□□□□ 0.45
SNX29P1-201ENST00000548357 RWDD1Q9H446 243 aaPredicted RBP17.85■□□□□ 0.45
SNX29P1-201ENST00000548357 PRDM12Q9H4Q4 367 aa17.85■□□□□ 0.45
SNX29P1-201ENST00000548357 TNKSO95271 1327 aa17.84■□□□□ 0.45
SNX29P1-201ENST00000548357 ZNF213O14771 459 aa17.84■□□□□ 0.45
SNX29P1-201ENST00000548357 ZEB2O60315 1214 aa17.84■□□□□ 0.45
SNX29P1-201ENST00000548357 PCP11498 1178 aaKnown RBP17.84■□□□□ 0.45
SNX29P1-201ENST00000548357 MYOGP15173 224 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms