RNA–Protein interactions for RNA: ENST00000548355.5

TMEM106C-208, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-208ENST00000548355 TDP2O95551 362 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 ICAM1P05362 532 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 POLR2MP0CAP2 368 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 VCAM1P19320 739 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 EPHX2P34913 555 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 USP11P51784 963 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 BACE1P56817 501 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 MDM2Q00987 491 aaPredicted RBP8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 PRKG1Q13976 671 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 DOCK1Q14185 1865 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 C11orf57Q6ZUT1 292 aaPredicted RBP8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 KRT26Q7Z3Y9 468 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 LDHDQ86WU2 507 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 SMARCE1Q969G3 411 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 PPP1R9BQ96SB3 815 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 RAB34Q9BZG1 259 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 CCSER1Q9C0I3 900 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 RPAP3Q9H6T3 665 aaPredicted RBP8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 DDX25Q9UHL0 483 aaKnown RBP8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 TUBE1Q9UJT0 475 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 FZD1Q9UP38 647 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 ZHX2Q9Y6X8 837 aa8.84□□□□□ -0.99
TMEM106C-208ENST00000548355 A0A087X0B3 334 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 IQCA1LA6NCM1 817 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 GLTPD2A6NH11 291 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 BECN2A8MW95 431 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 GOLGA6L19H0YKK7 550 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 FOXN1O15353 648 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 SLC37A4O43826 429 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 PPP1R12BO60237 982 aaPredicted RBP8.83□□□□□ -1
TMEM106C-208ENST00000548355 USP2O75604 605 aaPredicted RBP8.83□□□□□ -1
TMEM106C-208ENST00000548355 CFBP00751 764 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 FDX1P10109 184 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 TAL1P17542 331 aaPredicted RBP8.83□□□□□ -1
TMEM106C-208ENST00000548355 HOXA13P31271 388 aaPredicted RBP8.83□□□□□ -1
TMEM106C-208ENST00000548355 NF2P35240 595 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 STAT6P42226 847 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 TECP42680 631 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 TXKP42681 527 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 AFMP43652 599 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 IREB2P48200 963 aaKnown RBP8.83□□□□□ -1
TMEM106C-208ENST00000548355 FXR2P51116 673 aaKnown RBP eCLIP8.83□□□□□ -1
TMEM106C-208ENST00000548355 MAP3K9P80192 1104 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 ARHGAP4P98171 946 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 PLCB2Q00722 1185 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 RRAGBQ5VZM2 374 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 MOXD1Q6UVY6 613 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 CABP7Q86V35 215 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 LUZP1Q86V48 1076 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 ZC3H15Q8WU90 426 aaKnown RBP8.83□□□□□ -1
TMEM106C-208ENST00000548355 PAGE5Q96GU1 130 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 C12orf42Q96LP6 360 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 MTMR9Q96QG7 549 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 EHMT1Q9H9B1 1298 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 DISC1Q9NRI5 854 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 TMOD4Q9NZQ9 345 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 PNMA2Q9UL42 364 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 CCPG1Q9ULG6 757 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 PPP1R9AQ9ULJ8 1098 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 PCDHA5Q9Y5H7 936 aa8.83□□□□□ -1
TMEM106C-208ENST00000548355 CYP3A7-CYP3A51PA0A087WV96 503 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 A0A087WWV3 80 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 PP2D1A8MPX8 630 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 OPLAHO14841 1288 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 EDIL3O43854 480 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 PRR29P0C7W0 189 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 CYP3A7P24462 503 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 CDC25AP30304 524 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 SREBF1P36956 1147 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 HMGCS2P54868 508 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 DGKZQ13574 1117 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 VGLL4Q14135 290 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 PDIA5Q14554 519 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 KARSQ15046 597 aaKnown RBP8.82□□□□□ -1
TMEM106C-208ENST00000548355 E2F4Q16254 413 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 DPCR1Q3MIW9 517 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 ISM2Q6H9L7 571 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 PDXDC2PQ6P474 469 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 SH3RF1Q7Z6J0 888 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 FCHSD1Q86WN1 690 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 MCF2L2Q86YR7 1114 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 GRAMD1CQ8IYS0 662 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 TRIML1Q8N9V2 468 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 RBM46Q8TBY0 533 aaKnown RBP8.82□□□□□ -1
TMEM106C-208ENST00000548355 TRIM44Q96DX7 344 aaPredicted RBP8.82□□□□□ -1
TMEM106C-208ENST00000548355 CALML4Q96GE6 196 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 AGBL1Q96MI9 1066 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 BPIFA3Q9BQP9 254 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 CUEDC2Q9H467 287 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 MAGEF1Q9HAY2 307 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 SLC38A10Q9HBR0 1119 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 LRWD1Q9UFC0 647 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 DACH1Q9UI36 760 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 MAN1B1Q9UKM7 699 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 CSADQ9Y600 493 aa8.82□□□□□ -1
TMEM106C-208ENST00000548355 ZNF536O15090 1300 aa8.81□□□□□ -1
TMEM106C-208ENST00000548355 SMTNL1A8MU46 457 aa8.81□□□□□ -1
TMEM106C-208ENST00000548355 GTPBP6O43824 516 aaPredicted RBP8.81□□□□□ -1
TMEM106C-208ENST00000548355 ADCY5O95622 1261 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms